RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeastyeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB1YMR296C APL5Q08951 932 aaKnown RBP12.11□□□□□ -0.47
LCB1YMR296C TRM2P33753 639 aa12.1□□□□□ -0.47
LCB1YMR296C BLI1P35727 113 aa12.1□□□□□ -0.47
LCB1YMR296C HEL1P36113 551 aa12.1□□□□□ -0.47
LCB1YMR296C YHR202WP38887 602 aa12.1□□□□□ -0.47
LCB1YMR296C DNL4Q08387 944 aaPredicted RBP12.1□□□□□ -0.47
LCB1YMR296C SPO21Q12411 609 aa12.1□□□□□ -0.47
LCB1YMR296C CLB1P24868 471 aa12.1□□□□□ -0.47
LCB1YMR296C STB5P38699 743 aa12.1□□□□□ -0.47
LCB1YMR296C XDJ1P39102 459 aa12.1□□□□□ -0.47
LCB1YMR296C LCP5P40079 357 aaPredicted RBP12.1□□□□□ -0.47
LCB1YMR296C FAF1P40546 346 aaPredicted RBP12.1□□□□□ -0.47
LCB1YMR296C VPS70P47161 811 aa12.1□□□□□ -0.47
LCB1YMR296C RIM8P53179 542 aa12.1□□□□□ -0.47
LCB1YMR296C YGR130CP53278 816 aa12.1□□□□□ -0.47
LCB1YMR296C EEB1Q02891 456 aa12.1□□□□□ -0.47
LCB1YMR296C PUS1Q12211 544 aaKnown RBP12.1□□□□□ -0.47
LCB1YMR296C PKH2Q12236 1081 aaKnown RBP12.1□□□□□ -0.47
LCB1YMR296C ASP3-2P0CX77 362 aa12.09□□□□□ -0.47
LCB1YMR296C ASP3-3P0CX78 362 aa12.09□□□□□ -0.47
LCB1YMR296C ASP3-4P0CX79 362 aa12.09□□□□□ -0.47
LCB1YMR296C ASP3-1P0CZ17 362 aa12.09□□□□□ -0.47
LCB1YMR296C POL3P15436 1097 aa12.09□□□□□ -0.47
LCB1YMR296C OLA1P38219 394 aaKnown RBP12.09□□□□□ -0.47
LCB1YMR296C STB4P50104 949 aa12.09□□□□□ -0.47
LCB1YMR296C YNL034WP53963 612 aa12.09□□□□□ -0.47
LCB1YMR296C YNL018CP53976 612 aa12.09□□□□□ -0.47
LCB1YMR296C CWC21Q03375 135 aaKnown RBP12.09□□□□□ -0.47
LCB1YMR296C STE23Q06010 1027 aa12.09□□□□□ -0.47
LCB1YMR296C PRP9P19736 530 aaKnown RBP12.08□□□□□ -0.48
LCB1YMR296C PIN4P34217 668 aaKnown RBP RIP-Chip data12.08□□□□□ -0.48not detected
LCB1YMR296C CCL1P37366 393 aa12.08□□□□□ -0.48
LCB1YMR296C SPP381P38282 291 aaPredicted RBP12.08□□□□□ -0.48
LCB1YMR296C HIS2P38635 335 aa12.08□□□□□ -0.48
LCB1YMR296C JJJ1P53863 590 aa12.08□□□□□ -0.48
LCB1YMR296C YMR102CQ03177 834 aa12.08□□□□□ -0.48
LCB1YMR296C ESC8Q08119 714 aa12.08□□□□□ -0.48
LCB1YMR296C YLR462WO13556 202 aa12.07□□□□□ -0.48
LCB1YMR296C CDC33P07260 213 aaKnown RBP12.07□□□□□ -0.48
LCB1YMR296C CYS3P31373 394 aaKnown RBP12.07□□□□□ -0.48
LCB1YMR296C SEC21P32074 935 aaKnown RBP12.07□□□□□ -0.48
LCB1YMR296C YHL049CP38722 271 aa12.07□□□□□ -0.48
LCB1YMR296C YEL075CP39972 122 aa12.07□□□□□ -0.48
LCB1YMR296C YER189WP40104 122 aa12.07□□□□□ -0.48
LCB1YMR296C YFL064CP43540 174 aa12.07□□□□□ -0.48
LCB1YMR296C NMD5P46970 1048 aa12.07□□□□□ -0.48
LCB1YMR296C YMR1P47147 688 aaKnown RBP RIP-Chip data12.07□□□□□ -0.48not detected
LCB1YMR296C RNT1Q02555 471 aa12.07□□□□□ -0.48
LCB1YMR296C SNU56Q03782 492 aaKnown RBP12.07□□□□□ -0.48
LCB1YMR296C AIM41Q12032 185 aa12.07□□□□□ -0.48
LCB1YMR296C YBL111CQ3E7Y5 667 aa12.07□□□□□ -0.48
LCB1YMR296C SNF1P06782 633 aaKnown RBP12.06□□□□□ -0.48
LCB1YMR296C SLD2P34252 453 aa12.06□□□□□ -0.48
LCB1YMR296C RRT2P38332 387 aa12.06□□□□□ -0.48
LCB1YMR296C KAP123P40069 1113 aaKnown RBP12.06□□□□□ -0.48
LCB1YMR296C RCR2Q03446 210 aaKnown RBP12.06□□□□□ -0.48
LCB1YMR296C SGT2Q12118 346 aaKnown RBP12.06□□□□□ -0.48
LCB1YMR296C CTF3Q12748 733 aa12.06□□□□□ -0.48
LCB1YMR296C ARG4P04076 463 aaPredicted RBP12.06□□□□□ -0.48
LCB1YMR296C CIT2P08679 460 aa12.06□□□□□ -0.48
LCB1YMR296C RRN6P32786 894 aa12.06□□□□□ -0.48
LCB1YMR296C GCS1P35197 352 aa12.06□□□□□ -0.48
LCB1YMR296C DAS1P47005 663 aa12.06□□□□□ -0.48
LCB1YMR296C TDA9Q04545 1251 aa12.06□□□□□ -0.48
LCB1YMR296C CDD1Q06549 142 aa12.06□□□□□ -0.48
LCB1YMR296C RIO1Q12196 484 aaKnown RBP12.06□□□□□ -0.48
LCB1YMR296C DAL2P25335 343 aa12.05□□□□□ -0.48
LCB1YMR296C UBC6P33296 250 aaPredicted RBP12.05□□□□□ -0.48
LCB1YMR296C NCL1P38205 684 aaKnown RBP12.05□□□□□ -0.48
LCB1YMR296C YHR054CP38780 354 aa12.05□□□□□ -0.48
LCB1YMR296C YEL023CP39992 682 aa12.05□□□□□ -0.48
LCB1YMR296C PSY2P40164 858 aa12.05□□□□□ -0.48
LCB1YMR296C YMR187CQ03236 431 aa12.05□□□□□ -0.48
LCB1YMR296C SPO71Q03868 1245 aa12.05□□□□□ -0.48
LCB1YMR296C LAA1P39526 2014 aa12.05□□□□□ -0.48
LCB1YMR296C YMR084WA2P2R3 262 aa12.04□□□□□ -0.48
LCB1YMR296C NAT1P12945 854 aaKnown RBP12.04□□□□□ -0.48
LCB1YMR296C IME1P21190 360 aa12.04□□□□□ -0.48
LCB1YMR296C YHR131CP38835 850 aa12.04□□□□□ -0.48
LCB1YMR296C FTR1P40088 404 aa12.04□□□□□ -0.48
LCB1YMR296C ATG36P46983 293 aa12.04□□□□□ -0.48
LCB1YMR296C HAP2P06774 265 aa12.03□□□□□ -0.48
LCB1YMR296C PYC1P11154 1178 aaKnown RBP12.03□□□□□ -0.48
LCB1YMR296C GCD6P32501 712 aaKnown RBP12.03□□□□□ -0.48
LCB1YMR296C CBF2P32504 956 aa12.03□□□□□ -0.48
LCB1YMR296C MRN1Q08925 612 aaKnown RBP RIP-Chip data12.03□□□□□ -0.48not detected
LCB1YMR296C REC8Q12188 680 aa12.03□□□□□ -0.48
LCB1YMR296C PEX2P32800 271 aa12.03□□□□□ -0.48
LCB1YMR296C CCT2P39076 527 aaKnown RBP12.03□□□□□ -0.48
LCB1YMR296C CPR7P47103 393 aa12.03□□□□□ -0.48
LCB1YMR296C YJR039WP47107 1121 aa12.03□□□□□ -0.48
LCB1YMR296C STP1Q00947 519 aa12.03□□□□□ -0.48
LCB1YMR296C TBF1Q02457 562 aa12.03□□□□□ -0.48
LCB1YMR296C CEF1Q03654 590 aaPredicted RBP12.03□□□□□ -0.48
LCB1YMR296C YDR222WQ04925 415 aa12.03□□□□□ -0.48
LCB1YMR296C RGA2Q06407 1009 aa12.03□□□□□ -0.48
LCB1YMR296C MRI1Q06489 411 aaKnown RBP12.03□□□□□ -0.48
LCB1YMR296C CAP1P28495 268 aaKnown RBP12.02□□□□□ -0.49
LCB1YMR296C SWI3P32591 825 aa12.02□□□□□ -0.49
LCB1YMR296C YTA12P40341 825 aa12.02□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 46.9 ms