RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W PCL2P25693 308 aa5.5□□□□□ -1.53
ROT1YMR200W BRF1P29056 596 aa5.5□□□□□ -1.53
ROT1YMR200W DAL3P32459 195 aa5.5□□□□□ -1.53
ROT1YMR200W VMA8P32610 256 aaKnown RBP5.5□□□□□ -1.53
ROT1YMR200W PXA2P34230 853 aa5.5□□□□□ -1.53
ROT1YMR200W YKR078WP36158 585 aaKnown RBP5.5□□□□□ -1.53
ROT1YMR200W RKM3P38222 552 aa5.5□□□□□ -1.53
ROT1YMR200W CKB2P38930 258 aa5.5□□□□□ -1.53
ROT1YMR200W VPS8P39702 1274 aa5.5□□□□□ -1.53
ROT1YMR200W ERR3P42222 437 aa5.5□□□□□ -1.53
ROT1YMR200W ALG2P43636 503 aa5.5□□□□□ -1.53
ROT1YMR200W YKE2P52553 114 aa5.5□□□□□ -1.53
ROT1YMR200W HOL1P53389 586 aa5.5□□□□□ -1.53
ROT1YMR200W MEP3P53390 489 aa5.5□□□□□ -1.53
ROT1YMR200W GUD1Q07729 489 aa5.5□□□□□ -1.53
ROT1YMR200W PSR1Q07800 427 aa5.5□□□□□ -1.53
ROT1YMR200W HSP82P02829 709 aaKnown RBP5.49□□□□□ -1.53
ROT1YMR200W RPP2AP05319 106 aaKnown RBP5.49□□□□□ -1.53
ROT1YMR200W RPC82P32349 654 aa5.49□□□□□ -1.53
ROT1YMR200W SAS3P34218 831 aa5.49□□□□□ -1.53
ROT1YMR200W YEL1P34225 687 aa5.49□□□□□ -1.53
ROT1YMR200W GPI8P49018 411 aa5.49□□□□□ -1.53
ROT1YMR200W TRS130Q03660 1102 aa5.49□□□□□ -1.53
ROT1YMR200W SPN1Q06505 410 aaPredicted RBP5.49□□□□□ -1.53
ROT1YMR200W SPT7P35177 1332 aa5.48□□□□□ -1.53
ROT1YMR200W TY1B-AO13527 1196 aaKnown RBP5.48□□□□□ -1.53
ROT1YMR200W MSS18P08593 268 aa5.48□□□□□ -1.53
ROT1YMR200W CDC48P25694 835 aaKnown RBP5.48□□□□□ -1.53
ROT1YMR200W AAR2P32357 355 aaPredicted RBP5.48□□□□□ -1.53
ROT1YMR200W ECM32P32644 1121 aaKnown RBP5.48□□□□□ -1.53
ROT1YMR200W YBR238CP38330 731 aaKnown RBP5.48□□□□□ -1.53
ROT1YMR200W BIT2P38346 545 aa5.48□□□□□ -1.53
ROT1YMR200W MEP1P40260 492 aa5.48□□□□□ -1.53
ROT1YMR200W GZF3P42944 551 aaKnown RBP5.48□□□□□ -1.53
ROT1YMR200W SGM1P47166 707 aa5.48□□□□□ -1.53
ROT1YMR200W RAI1P53063 387 aaKnown RBP5.48□□□□□ -1.53
ROT1YMR200W HOS2P53096 452 aaPredicted RBP5.48□□□□□ -1.53
ROT1YMR200W YGR016WP53209 190 aa5.48□□□□□ -1.53
ROT1YMR200W SDH5Q08230 162 aa5.48□□□□□ -1.53
ROT1YMR200W UPC2Q12151 913 aa5.48□□□□□ -1.53
ROT1YMR200W YPR071WQ12346 211 aa5.48□□□□□ -1.53
ROT1YMR200W RER1P25560 188 aa5.47□□□□□ -1.53
ROT1YMR200W KAR4P25583 335 aa5.47□□□□□ -1.53
ROT1YMR200W HEM12P32347 362 aaPredicted RBP5.47□□□□□ -1.53
ROT1YMR200W SCT1P32784 759 aa5.47□□□□□ -1.53
ROT1YMR200W SPC29P33419 253 aa5.47□□□□□ -1.53
ROT1YMR200W ATG19P35193 415 aa5.47□□□□□ -1.53
ROT1YMR200W PET10P36139 283 aa5.47□□□□□ -1.53
ROT1YMR200W YRO2P38079 344 aa5.47□□□□□ -1.53
ROT1YMR200W CAJ1P39101 391 aa5.47□□□□□ -1.53
ROT1YMR200W SIT1P39980 628 aa5.47□□□□□ -1.53
ROT1YMR200W QRI7P43122 407 aa5.47□□□□□ -1.53
ROT1YMR200W BUL1P48524 976 aa5.47□□□□□ -1.53
ROT1YMR200W CTF4Q01454 927 aa5.47□□□□□ -1.53
ROT1YMR200W SSM4P40318 1319 aa5.47□□□□□ -1.53
ROT1YMR200W NOT3P06102 836 aaKnown RBP5.46□□□□□ -1.54
ROT1YMR200W HRR25P29295 494 aaKnown RBP5.46□□□□□ -1.54
ROT1YMR200W STE14P32584 239 aa5.46□□□□□ -1.54
ROT1YMR200W BCD1P38772 366 aa5.46□□□□□ -1.54
ROT1YMR200W MNN11P46985 422 aaKnown RBP5.46□□□□□ -1.54
ROT1YMR200W BTN2P53286 410 aa5.46□□□□□ -1.54
ROT1YMR200W MRP7P12687 371 aa5.45□□□□□ -1.54
ROT1YMR200W FUR1P18562 216 aaKnown RBP5.45□□□□□ -1.54
ROT1YMR200W SEC18P18759 758 aaKnown RBP5.45□□□□□ -1.54
ROT1YMR200W COX11P19516 300 aaKnown RBP5.45□□□□□ -1.54
ROT1YMR200W SAN1P22470 610 aa5.45□□□□□ -1.54
ROT1YMR200W STO1P34160 861 aaKnown RBP5.45□□□□□ -1.54
ROT1YMR200W NOP4P37838 685 aaKnown RBP5.45□□□□□ -1.54
ROT1YMR200W PSY4P38193 441 aa5.45□□□□□ -1.54
ROT1YMR200W RXT2P38255 430 aa5.45□□□□□ -1.54
ROT1YMR200W EMP65P40085 556 aa5.45□□□□□ -1.54
ROT1YMR200W GPD2P41911 440 aaKnown RBP5.45□□□□□ -1.54
ROT1YMR200W ATP22P50273 684 aaPredicted RBP5.45□□□□□ -1.54
ROT1YMR200W SLD3P53135 668 aa5.45□□□□□ -1.54
ROT1YMR200W SLU7Q02775 382 aaKnown RBP5.45□□□□□ -1.54
ROT1YMR200W PRP3Q03338 469 aaPredicted RBP5.45□□□□□ -1.54
ROT1YMR200W SSL1Q04673 461 aaPredicted RBP5.45□□□□□ -1.54
ROT1YMR200W BLS1Q06071 122 aa5.45□□□□□ -1.54
ROT1YMR200W HIM1Q06674 414 aa5.45□□□□□ -1.54
ROT1YMR200W ENT1Q12518 454 aa5.45□□□□□ -1.54
ROT1YMR200W ADE8P04161 214 aa5.44□□□□□ -1.54
ROT1YMR200W KRR1P25586 316 aaPredicted RBP5.44□□□□□ -1.54
ROT1YMR200W UBS1P38290 277 aa5.44□□□□□ -1.54
ROT1YMR200W PCM1P38628 557 aaKnown RBP5.44□□□□□ -1.54
ROT1YMR200W TOK1P40310 691 aa5.44□□□□□ -1.54
ROT1YMR200W YGR153WP48238 217 aa5.44□□□□□ -1.54
ROT1YMR200W EIS1Q05050 843 aaKnown RBP5.44□□□□□ -1.54
ROT1YMR200W ENB1Q08299 606 aa5.44□□□□□ -1.54
ROT1YMR200W YOL114CQ12322 202 aa5.44□□□□□ -1.54
ROT1YMR200W PGS1P25578 521 aa5.43□□□□□ -1.54
ROT1YMR200W RPD3P32561 433 aa5.43□□□□□ -1.54
ROT1YMR200W STE13P33894 931 aa5.43□□□□□ -1.54
ROT1YMR200W DID4P36108 232 aa5.43□□□□□ -1.54
ROT1YMR200W AIM14P53109 570 aa5.43□□□□□ -1.54
ROT1YMR200W TLG1Q03322 224 aa5.43□□□□□ -1.54
ROT1YMR200W PKH1Q03407 766 aa5.43□□□□□ -1.54
ROT1YMR200W NSE5Q03718 556 aa5.43□□□□□ -1.54
ROT1YMR200W PEX15Q08215 383 aa5.43□□□□□ -1.54
ROT1YMR200W HSH49Q99181 213 aaPredicted RBP5.43□□□□□ -1.54
ROT1YMR200W NAT1P12945 854 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 111.2 ms