RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C PKP1P40530 394 aa5.76□□□□□ -1.49
VBA1YMR088C RNR4P49723 345 aaKnown RBP5.76□□□□□ -1.49
VBA1YMR088C BSC5P53755 489 aa5.76□□□□□ -1.49
VBA1YMR088C SHE9Q04172 456 aa5.76□□□□□ -1.49
VBA1YMR088C RBS1Q05672 457 aaKnown RBP5.76□□□□□ -1.49
VBA1YMR088C SGD1Q06132 899 aa5.76□□□□□ -1.49
VBA1YMR088C MPD2Q99316 277 aa5.76□□□□□ -1.49
VBA1YMR088C MHP1P43638 1398 aa5.76□□□□□ -1.49
VBA1YMR088C XRN1P22147 1528 aaKnown RBP5.76□□□□□ -1.49
VBA1YMR088C TUS1Q06412 1307 aa5.76□□□□□ -1.49
VBA1YMR088C PDE2P06776 526 aa5.75□□□□□ -1.49
VBA1YMR088C CYT1P07143 309 aa5.75□□□□□ -1.49
VBA1YMR088C DAT1P13483 248 aaKnown RBP5.75□□□□□ -1.49
VBA1YMR088C HCA4P20448 770 aaKnown RBP5.75□□□□□ -1.49
VBA1YMR088C CLB3P24870 427 aa5.75□□□□□ -1.49
VBA1YMR088C DPH2P32461 534 aa5.75□□□□□ -1.49
VBA1YMR088C MEI5P32489 222 aa5.75□□□□□ -1.49
VBA1YMR088C MOT2P34909 587 aaKnown RBP5.75□□□□□ -1.49
VBA1YMR088C UBP11P36026 717 aa5.75□□□□□ -1.49
VBA1YMR088C SDS22P36047 338 aa5.75□□□□□ -1.49
VBA1YMR088C TYS1P36421 394 aaKnown RBP5.75□□□□□ -1.49
VBA1YMR088C MSG5P38590 489 aa5.75□□□□□ -1.49
VBA1YMR088C JLP2P40206 208 aa5.75□□□□□ -1.49
VBA1YMR088C STB1P42845 420 aa5.75□□□□□ -1.49
VBA1YMR088C ABZ2Q03266 374 aa5.75□□□□□ -1.49
VBA1YMR088C SPC24Q04477 213 aa5.75□□□□□ -1.49
VBA1YMR088C NOP6Q07623 225 aaKnown RBP5.75□□□□□ -1.49
VBA1YMR088C BDS1Q08347 646 aa5.75□□□□□ -1.49
VBA1YMR088C CDC53Q12018 815 aaKnown RBP5.75□□□□□ -1.49
VBA1YMR088C AHC1Q12433 566 aa5.75□□□□□ -1.49
VBA1YMR088C DAP2P18962 818 aa5.75□□□□□ -1.49
VBA1YMR088C CLB4P24871 460 aa5.75□□□□□ -1.49
VBA1YMR088C PPQ1P32945 549 aa5.75□□□□□ -1.49
VBA1YMR088C PMT1P33775 817 aa5.75□□□□□ -1.49
VBA1YMR088C SEG2P34250 1132 aa5.75□□□□□ -1.49
VBA1YMR088C HEL1P36113 551 aa5.75□□□□□ -1.49
VBA1YMR088C MNN2P38069 597 aa5.75□□□□□ -1.49
VBA1YMR088C YMR262WP38430 313 aa5.75□□□□□ -1.49
VBA1YMR088C STP2P38704 541 aa5.75□□□□□ -1.49
VBA1YMR088C YHI9P38765 294 aa5.75□□□□□ -1.49
VBA1YMR088C TMA108P40462 946 aa5.75□□□□□ -1.49
VBA1YMR088C BNA1P47096 177 aa5.75□□□□□ -1.49
VBA1YMR088C ENT3P47160 408 aa5.75□□□□□ -1.49
VBA1YMR088C MRPL50P53724 139 aa5.75□□□□□ -1.49
VBA1YMR088C GOR1P53839 350 aa5.75□□□□□ -1.49
VBA1YMR088C YNL146WP53906 100 aa5.75□□□□□ -1.49
VBA1YMR088C SFB2P53953 876 aa5.75□□□□□ -1.49
VBA1YMR088C RSC4Q02206 625 aa5.75□□□□□ -1.49
VBA1YMR088C CUS1Q02554 436 aaPredicted RBP5.75□□□□□ -1.49
VBA1YMR088C TAF12Q03761 539 aa5.75□□□□□ -1.49
VBA1YMR088C MCM21Q06675 368 aa5.75□□□□□ -1.49
VBA1YMR088C YPD1Q07688 167 aa5.75□□□□□ -1.49
VBA1YMR088C RSC58Q07979 502 aa5.75□□□□□ -1.49
VBA1YMR088C MSC6Q08818 692 aaKnown RBP5.75□□□□□ -1.49
VBA1YMR088C GPR1Q12361 961 aa5.75□□□□□ -1.49
VBA1YMR088C YBL113CQ7M4S9 792 aa5.75□□□□□ -1.49
VBA1YMR088C RPP2BP02400 110 aaKnown RBP5.74□□□□□ -1.49
VBA1YMR088C PAB1P04147 577 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
VBA1YMR088C SIR3P06701 978 aa5.74□□□□□ -1.49
VBA1YMR088C TUP1P16649 713 aa5.74□□□□□ -1.49
VBA1YMR088C LCB1P25045 558 aaKnown RBP5.74□□□□□ -1.49
VBA1YMR088C NAM7P30771 971 aaKnown RBP5.74□□□□□ -1.49
VBA1YMR088C SUV3P32580 737 aa5.74□□□□□ -1.49
VBA1YMR088C KAP104P38217 918 aaKnown RBP5.74□□□□□ -1.49
VBA1YMR088C CCZ1P38273 704 aa5.74□□□□□ -1.49
VBA1YMR088C YBR138CP38277 524 aa5.74□□□□□ -1.49
VBA1YMR088C RRM3P38766 723 aa5.74□□□□□ -1.49
VBA1YMR088C DYS1P38791 387 aa5.74□□□□□ -1.49
VBA1YMR088C LRP1P38801 184 aaKnown RBP5.74□□□□□ -1.49
VBA1YMR088C SEC31P38968 1273 aaKnown RBP5.74□□□□□ -1.49
VBA1YMR088C YER186CP40101 306 aa5.74□□□□□ -1.49
VBA1YMR088C YTA12P40341 825 aa5.74□□□□□ -1.49
VBA1YMR088C RBL2P48606 106 aaKnown RBP5.74□□□□□ -1.49
VBA1YMR088C ERV25P54837 211 aaKnown RBP5.74□□□□□ -1.49
VBA1YMR088C RMI1Q02685 241 aa5.74□□□□□ -1.49
VBA1YMR088C PHO92Q06390 306 aa5.74□□□□□ -1.49
VBA1YMR088C SOG2Q08817 791 aa5.74□□□□□ -1.49
VBA1YMR088C WTM2Q12206 467 aa5.74□□□□□ -1.49
VBA1YMR088C NYV1Q12255 253 aa5.74□□□□□ -1.49
VBA1YMR088C MED1Q12321 566 aa5.74□□□□□ -1.49
VBA1YMR088C IES3Q12345 250 aa5.74□□□□□ -1.49
VBA1YMR088C TMA7Q3E764 64 aaKnown RBP5.74□□□□□ -1.49
VBA1YMR088C SRN2Q99176 213 aa5.74□□□□□ -1.49
VBA1YMR088C NUP157P40064 1391 aaKnown RBP5.74□□□□□ -1.49
VBA1YMR088C RAV1P47104 1357 aa5.74□□□□□ -1.49
VBA1YMR088C MMS22Q06164 1454 aa5.74□□□□□ -1.49
VBA1YMR088C STI1P15705 589 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
VBA1YMR088C OM45P16547 393 aa5.73□□□□□ -1.49
VBA1YMR088C ALG1P16661 449 aa5.73□□□□□ -1.49
VBA1YMR088C PFK2P16862 959 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
VBA1YMR088C KIN3P22209 435 aa5.73□□□□□ -1.49
VBA1YMR088C NGR1P32831 672 aaKnown RBP5.73□□□□□ -1.49
VBA1YMR088C NPL6P32832 435 aa5.73□□□□□ -1.49
VBA1YMR088C RPT1P33299 467 aaKnown RBP5.73□□□□□ -1.49
VBA1YMR088C MRPL17P36528 281 aa5.73□□□□□ -1.49
VBA1YMR088C PBP2P38151 413 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
VBA1YMR088C SWC5P38326 303 aa5.73□□□□□ -1.49
VBA1YMR088C VMA22P38784 181 aa5.73□□□□□ -1.49
VBA1YMR088C PAN5P38787 379 aa5.73□□□□□ -1.49
VBA1YMR088C ERP5P38819 212 aa5.73□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms