RNA–Protein interactions for RNA: YLR335W

NUP2, Transcript of Nucleoporin involved in nucleocytoplasmic transport, yeast

Gene NUP2, Length 2,163 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP2	YLR335W	RGD2	P43556	714 aa		4.64	□□□□□ -1.67
NUP2	YLR335W	ATG36	P46983	293 aa		4.64	□□□□□ -1.67
NUP2	YLR335W	VMA10	P48836	114 aa	Known RBP	4.64	□□□□□ -1.67
NUP2	YLR335W	INP52	P50942	1183 aa		4.64	□□□□□ -1.67
NUP2	YLR335W	MCM6	P53091	1017 aa	Known RBP	4.64	□□□□□ -1.67
NUP2	YLR335W	PPM1	Q04081	328 aa		4.64	□□□□□ -1.67
NUP2	YLR335W	RRP15	Q06511	250 aa	Predicted RBP	4.64	□□□□□ -1.67
NUP2	YLR335W	GPM3	Q12326	303 aa		4.64	□□□□□ -1.67
NUP2	YLR335W	ARP6	Q12509	438 aa		4.64	□□□□□ -1.67
NUP2	YLR335W	ILS1	P09436	1072 aa	Known RBP	4.64	□□□□□ -1.67
NUP2	YLR335W	SAM2	P19358	384 aa	Known RBP	4.64	□□□□□ -1.67
NUP2	YLR335W	DBP5	P20449	482 aa	Known RBP	4.64	□□□□□ -1.67
NUP2	YLR335W	YEL1	P34225	687 aa		4.64	□□□□□ -1.67
NUP2	YLR335W	PGM2	P37012	569 aa	Known RBP	4.64	□□□□□ -1.67
NUP2	YLR335W	MSR1	P38714	643 aa		4.64	□□□□□ -1.67
NUP2	YLR335W	FIS1	P40515	155 aa		4.64	□□□□□ -1.67
NUP2	YLR335W	FMP33	P46998	180 aa		4.64	□□□□□ -1.67
NUP2	YLR335W	YML6	P51998	286 aa		4.64	□□□□□ -1.67
NUP2	YLR335W	RPA49	Q01080	415 aa	Predicted RBP	4.64	□□□□□ -1.67
NUP2	YLR335W	ATP25	Q03153	612 aa		4.64	□□□□□ -1.67
NUP2	YLR335W	ADI1	Q03677	179 aa		4.64	□□□□□ -1.67
NUP2	YLR335W	UFO1	Q04511	668 aa		4.64	□□□□□ -1.67
NUP2	YLR335W	PRM6	Q04705	352 aa		4.64	□□□□□ -1.67
NUP2	YLR335W	IVY1	Q04934	453 aa		4.64	□□□□□ -1.67
NUP2	YLR335W	RRG1	Q12167	365 aa	Predicted RBP	4.64	□□□□□ -1.67
NUP2	YLR335W	RRP36	Q12481	300 aa	Predicted RBP	4.64	□□□□□ -1.67
NUP2	YLR335W	NKP1	Q12493	238 aa		4.64	□□□□□ -1.67
NUP2	YLR335W	CMD1	P06787	147 aa	Known RBP	4.63	□□□□□ -1.67
NUP2	YLR335W	CAF20	P12962	161 aa	Known RBP	4.63	□□□□□ -1.67
NUP2	YLR335W	TPS2	P31688	896 aa	Known RBP	4.63	□□□□□ -1.67
NUP2	YLR335W	FRT2	P39734	528 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	AIM21	P40563	679 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	GSM1	P42950	618 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	SUE1	Q06524	206 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	CDC73	Q06697	393 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	YVC1	Q12324	675 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	SPE4	Q12455	300 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	NOT5	Q12514	560 aa	Predicted RBP	4.63	□□□□□ -1.67
NUP2	YLR335W	ERG12	P07277	443 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	STE6	P12866	1290 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	AEP2	P22136	580 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	DBP1	P24784	617 aa	Known RBP	4.63	□□□□□ -1.67
NUP2	YLR335W	RPS7A	P26786	190 aa	Known RBP	4.63	□□□□□ -1.67
NUP2	YLR335W	MUD1	P32605	298 aa	Known RBP	4.63	□□□□□ -1.67
NUP2	YLR335W	RRN6	P32786	894 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	CSG2	P35206	410 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	MRP8	P35719	219 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	LHS1	P36016	881 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	RRP14	P36080	434 aa	Known RBP	4.63	□□□□□ -1.67
NUP2	YLR335W	YBL028C	P38202	106 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	SCS2	P40075	244 aa	Known RBP	4.63	□□□□□ -1.67
NUP2	YLR335W	ARG2	P40360	574 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	PHO86	P46956	311 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	NOP15	P53927	220 aa	Predicted RBP	4.63	□□□□□ -1.67
NUP2	YLR335W	SLT2	Q00772	484 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	PTA1	Q01329	785 aa	Predicted RBP	4.63	□□□□□ -1.67
NUP2	YLR335W	SXM1	Q04175	944 aa	Known RBP	4.63	□□□□□ -1.67
NUP2	YLR335W	IES3	Q12345	250 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	RTP1	Q12751	981 aa		4.63	□□□□□ -1.67
NUP2	YLR335W	TY1B-A	O13527	1196 aa	Known RBP	4.62	□□□□□ -1.67
NUP2	YLR335W	SUP45	P12385	437 aa	Known RBP	4.62	□□□□□ -1.67
NUP2	YLR335W	VMA1	P17255	1071 aa	Known RBP	4.62	□□□□□ -1.67
NUP2	YLR335W	SLA2	P33338	968 aa		4.62	□□□□□ -1.67
NUP2	YLR335W	DUG2	P38149	878 aa		4.62	□□□□□ -1.67
NUP2	YLR335W	GTT3	P39996	337 aa		4.62	□□□□□ -1.67
NUP2	YLR335W	NPP2	P39997	493 aa		4.62	□□□□□ -1.67
NUP2	YLR335W	ALA1	P40825	983 aa	Known RBP	4.62	□□□□□ -1.67
NUP2	YLR335W	IAH1	P41734	238 aa		4.62	□□□□□ -1.67
NUP2	YLR335W	CLA4	P48562	842 aa		4.62	□□□□□ -1.67
NUP2	YLR335W	PAN2	P53010	1115 aa	Predicted RBP	4.62	□□□□□ -1.67
NUP2	YLR335W	RTA1	P53047	317 aa		4.62	□□□□□ -1.67
NUP2	YLR335W	LIF1	P53150	421 aa		4.62	□□□□□ -1.67
NUP2	YLR335W	DIP5	P53388	608 aa		4.62	□□□□□ -1.67
NUP2	YLR335W	RCF2	P53721	224 aa		4.62	□□□□□ -1.67
NUP2	YLR335W	DSL1	P53847	754 aa		4.62	□□□□□ -1.67
NUP2	YLR335W	YNL058C	P53947	316 aa		4.62	□□□□□ -1.67
NUP2	YLR335W	TRE1	Q08919	783 aa		4.62	□□□□□ -1.67
NUP2	YLR335W	VIK1	Q12045	647 aa		4.62	□□□□□ -1.67
NUP2	YLR335W	GET4	Q12125	312 aa		4.62	□□□□□ -1.67
NUP2	YLR335W	RRD2	Q12461	358 aa		4.62	□□□□□ -1.67
NUP2	YLR335W	ENO2	P00925	437 aa	Known RBP	4.61	□□□□□ -1.67
NUP2	YLR335W	RPL24A	P04449	155 aa	Known RBP	4.61	□□□□□ -1.67
NUP2	YLR335W	RPS9B	P05755	195 aa	Known RBP	4.61	□□□□□ -1.67
NUP2	YLR335W	ADP1	P25371	1049 aa		4.61	□□□□□ -1.67
NUP2	YLR335W	MGT1	P26188	188 aa		4.61	□□□□□ -1.67
NUP2	YLR335W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
NUP2	YLR335W	ATG19	P35193	415 aa		4.61	□□□□□ -1.67
NUP2	YLR335W	YKR015C	P36111	568 aa		4.61	□□□□□ -1.67
NUP2	YLR335W	TSC10	P38342	320 aa		4.61	□□□□□ -1.67
NUP2	YLR335W	SMF2	P38778	549 aa		4.61	□□□□□ -1.67
NUP2	YLR335W	FTR1	P40088	404 aa		4.61	□□□□□ -1.67
NUP2	YLR335W	PFK26	P40433	827 aa	Known RBP	4.61	□□□□□ -1.67
NUP2	YLR335W	TMA108	P40462	946 aa		4.61	□□□□□ -1.67
NUP2	YLR335W	ULP2	P40537	1034 aa	Predicted RBP	4.61	□□□□□ -1.67
NUP2	YLR335W	SET4	P42948	560 aa		4.61	□□□□□ -1.67
NUP2	YLR335W	SHE10	P53075	577 aa		4.61	□□□□□ -1.67
NUP2	YLR335W	NMA2	P53204	395 aa		4.61	□□□□□ -1.67
NUP2	YLR335W	ARK1	P53974	638 aa		4.61	□□□□□ -1.67
NUP2	YLR335W	RPM2	Q02773	1202 aa		4.61	□□□□□ -1.67
NUP2	YLR335W	ACL4	Q03771	387 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 176.7 ms