RNA–Protein interactions for RNA: YLR262C

YPT6, Transcript of Rab family GTPase, yeast

Gene YPT6, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT6	YLR262C	YKR018C	P36114	725 aa		4.72	□□□□□ -1.65
YPT6	YLR262C	YJL206C	P39529	758 aa		4.72	□□□□□ -1.65
YPT6	YLR262C	SMX3	P54999	86 aa	Predicted RBP	4.72	□□□□□ -1.65
YPT6	YLR262C	YNL162W-A	Q3E7A8	72 aa		4.72	□□□□□ -1.65
YPT6	YLR262C	ERG6	P25087	383 aa	Known RBP	4.71	□□□□□ -1.66
YPT6	YLR262C	CCR4	P31384	837 aa	Known RBP	4.71	□□□□□ -1.66
YPT6	YLR262C	HIR1	P32479	840 aa		4.71	□□□□□ -1.66
YPT6	YLR262C	YEL1	P34225	687 aa		4.71	□□□□□ -1.66
YPT6	YLR262C	YNL195C	P40168	261 aa		4.71	□□□□□ -1.66
YPT6	YLR262C	HLJ1	P48353	224 aa		4.71	□□□□□ -1.66
YPT6	YLR262C	MTL1	P53214	551 aa		4.71	□□□□□ -1.66
YPT6	YLR262C	COX18	P53239	316 aa		4.71	□□□□□ -1.66
YPT6	YLR262C	ARG5,6	Q01217	863 aa		4.71	□□□□□ -1.66
YPT6	YLR262C	RGC1	Q06108	1083 aa	Known RBP	4.71	□□□□□ -1.66
YPT6	YLR262C	ARO10	Q06408	635 aa		4.71	□□□□□ -1.66
YPT6	YLR262C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
YPT6	YLR262C	ADY2	P25613	283 aa		4.7	□□□□□ -1.66
YPT6	YLR262C	FLO10	P36170	1169 aa		4.7	□□□□□ -1.66
YPT6	YLR262C	BAP3	P41815	604 aa		4.7	□□□□□ -1.66
YPT6	YLR262C	BRE5	P53741	515 aa	Known RBP	4.7	□□□□□ -1.66
YPT6	YLR262C	SPO11	P23179	398 aa		4.69	□□□□□ -1.66
YPT6	YLR262C	APL2	P36000	726 aa	Predicted RBP	4.69	□□□□□ -1.66
YPT6	YLR262C	APT2	P36973	181 aa		4.69	□□□□□ -1.66
YPT6	YLR262C	LYS9	P38999	446 aa		4.69	□□□□□ -1.66
YPT6	YLR262C	CCT3	P39077	534 aa	Known RBP	4.69	□□□□□ -1.66
YPT6	YLR262C	ECM1	P39715	212 aa		4.69	□□□□□ -1.66
YPT6	YLR262C	MGS1	P40151	587 aa		4.69	□□□□□ -1.66
YPT6	YLR262C	APM1	Q00776	475 aa	Predicted RBP	4.69	□□□□□ -1.66
YPT6	YLR262C	COG8	Q04632	607 aa		4.69	□□□□□ -1.66
YPT6	YLR262C	HOF1	Q05080	669 aa		4.69	□□□□□ -1.66
YPT6	YLR262C	YGR161W-C	Q3E744	92 aa		4.69	□□□□□ -1.66
YPT6	YLR262C	ECM3	Q99252	613 aa		4.69	□□□□□ -1.66
YPT6	YLR262C	HRP1	Q99383	534 aa	Known RBP	4.69	□□□□□ -1.66
YPT6	YLR262C	MDM10	P18409	493 aa		4.68	□□□□□ -1.66
YPT6	YLR262C	MVD1	P32377	396 aa	Known RBP	4.68	□□□□□ -1.66
YPT6	YLR262C	FMO1	P38866	432 aa		4.68	□□□□□ -1.66
YPT6	YLR262C	NDC80	P40460	691 aa		4.68	□□□□□ -1.66
YPT6	YLR262C	CTK1	Q03957	528 aa	Known RBP	4.68	□□□□□ -1.66
YPT6	YLR262C	MCM21	Q06675	368 aa		4.68	□□□□□ -1.66
YPT6	YLR262C	THI73	Q07904	523 aa		4.68	□□□□□ -1.66
YPT6	YLR262C	DCS2	Q12123	353 aa		4.68	□□□□□ -1.66
YPT6	YLR262C	TAF3	Q12297	353 aa		4.68	□□□□□ -1.66
YPT6	YLR262C	YKL033W-A	Q86ZR7	236 aa		4.68	□□□□□ -1.66
YPT6	YLR262C	NUP145	P49687	1317 aa		4.68	□□□□□ -1.66
YPT6	YLR262C	PYC1	P11154	1178 aa	Known RBP	4.67	□□□□□ -1.66
YPT6	YLR262C	RNR1	P21524	888 aa	Known RBP	4.67	□□□□□ -1.66
YPT6	YLR262C	PRP19	P32523	503 aa	Known RBP	4.67	□□□□□ -1.66
YPT6	YLR262C	SFB3	P38810	929 aa		4.67	□□□□□ -1.66
YPT6	YLR262C	GET2	P40056	285 aa		4.67	□□□□□ -1.66
YPT6	YLR262C	YJR096W	P47137	282 aa		4.67	□□□□□ -1.66
YPT6	YLR262C	UTP14	Q04500	899 aa	Known RBP	4.67	□□□□□ -1.66
YPT6	YLR262C	AFT2	Q08957	416 aa		4.67	□□□□□ -1.66
YPT6	YLR262C	SIR3	P06701	978 aa		4.66	□□□□□ -1.66
YPT6	YLR262C	TRZ1	P36159	838 aa	Predicted RBP	4.66	□□□□□ -1.66
YPT6	YLR262C	BRN1	P38170	754 aa		4.66	□□□□□ -1.66
YPT6	YLR262C	APN2	P38207	520 aa		4.66	□□□□□ -1.66
YPT6	YLR262C	SSZ1	P38788	538 aa	Known RBP	4.66	□□□□□ -1.66
YPT6	YLR262C	FPR3	P38911	411 aa	Known RBP	4.66	□□□□□ -1.66
YPT6	YLR262C	NUG1	P40010	520 aa	Known RBP	4.66	□□□□□ -1.66
YPT6	YLR262C	ARG2	P40360	574 aa		4.66	□□□□□ -1.66
YPT6	YLR262C	CCT7	P42943	550 aa	Known RBP	4.66	□□□□□ -1.66
YPT6	YLR262C	SET2	P46995	733 aa	Known RBP	4.66	□□□□□ -1.66
YPT6	YLR262C	PAN2	P53010	1115 aa	Predicted RBP	4.66	□□□□□ -1.66
YPT6	YLR262C	RPN13	O13563	156 aa		4.65	□□□□□ -1.67
YPT6	YLR262C	GLG1	P36143	616 aa		4.65	□□□□□ -1.67
YPT6	YLR262C	TYS1	P36421	394 aa	Known RBP	4.65	□□□□□ -1.67
YPT6	YLR262C	TDA3	P38758	523 aa		4.65	□□□□□ -1.67
YPT6	YLR262C	CRP1	P38845	465 aa	Known RBP	4.65	□□□□□ -1.67
YPT6	YLR262C	YHR202W	P38887	602 aa		4.65	□□□□□ -1.67
YPT6	YLR262C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
YPT6	YLR262C	CTR1	P49573	406 aa		4.65	□□□□□ -1.67
YPT6	YLR262C	THI7	Q05998	598 aa		4.65	□□□□□ -1.67
YPT6	YLR262C	ISA1	Q07821	250 aa	Predicted RBP	4.65	□□□□□ -1.67
YPT6	YLR262C	NUP60	P39705	539 aa		4.64	□□□□□ -1.67
YPT6	YLR262C	YJR039W	P47107	1121 aa		4.64	□□□□□ -1.67
YPT6	YLR262C	YNR029C	P53729	429 aa	Known RBP	4.64	□□□□□ -1.67
YPT6	YLR262C	REC102	Q02721	264 aa		4.64	□□□□□ -1.67
YPT6	YLR262C	HMO1	Q03973	246 aa	Known RBP	4.64	□□□□□ -1.67
YPT6	YLR262C	EMP70	P32802	667 aa		4.63	□□□□□ -1.67
YPT6	YLR262C	YKR075C	P36155	307 aa		4.63	□□□□□ -1.67
YPT6	YLR262C	AKL1	P38080	1108 aa	Known RBP	4.63	□□□□□ -1.67
YPT6	YLR262C	CKB2	P38930	258 aa		4.63	□□□□□ -1.67
YPT6	YLR262C	BDH2	P39713	417 aa		4.63	□□□□□ -1.67
YPT6	YLR262C	YEL020C	P39994	560 aa		4.63	□□□□□ -1.67
YPT6	YLR262C	GID8	P40208	455 aa		4.63	□□□□□ -1.67
YPT6	YLR262C	NOP9	P47077	666 aa	Known RBP	4.63	□□□□□ -1.67
YPT6	YLR262C	YGR153W	P48238	217 aa		4.63	□□□□□ -1.67
YPT6	YLR262C	GPD1	Q00055	391 aa	Known RBP	4.63	□□□□□ -1.67
YPT6	YLR262C	UME1	Q03010	460 aa		4.63	□□□□□ -1.67
YPT6	YLR262C	MTQ2	Q03920	221 aa	Predicted RBP	4.63	□□□□□ -1.67
YPT6	YLR262C	IMG2	P25642	146 aa	Predicted RBP	4.62	□□□□□ -1.67
YPT6	YLR262C	RET2	P43621	546 aa		4.62	□□□□□ -1.67
YPT6	YLR262C	VPS36	Q06696	566 aa		4.62	□□□□□ -1.67
YPT6	YLR262C	PHO11	P35842	467 aa		4.61	□□□□□ -1.67
YPT6	YLR262C	PHO12	P38693	467 aa		4.61	□□□□□ -1.67
YPT6	YLR262C	YGR237C	P50089	785 aa		4.61	□□□□□ -1.67
YPT6	YLR262C	GPG1	P53130	126 aa		4.61	□□□□□ -1.67
YPT6	YLR262C	ATG4	P53867	494 aa		4.61	□□□□□ -1.67
YPT6	YLR262C	YLR407W	Q06070	228 aa		4.61	□□□□□ -1.67
YPT6	YLR262C	RPS21B	Q3E754	87 aa	Known RBP	4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 77.8 ms