RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C SEC21P32074 935 aaKnown RBP2.71□□□□□ -1.98
UBP11YKR098C APN2P38207 520 aa2.71□□□□□ -1.98
UBP11YKR098C EXO84P38261 753 aa2.71□□□□□ -1.98
UBP11YKR098C ACA1P39970 489 aa2.71□□□□□ -1.98
UBP11YKR098C RPT2P40327 437 aaKnown RBP2.71□□□□□ -1.98
UBP11YKR098C CCT8P47079 568 aaKnown RBP2.71□□□□□ -1.98
UBP11YKR098C HOL1P53389 586 aa2.71□□□□□ -1.98
UBP11YKR098C SNO2P53823 222 aa2.71□□□□□ -1.98
UBP11YKR098C SLU7Q02775 382 aaKnown RBP2.71□□□□□ -1.98
UBP11YKR098C DUS4Q06063 367 aa2.71□□□□□ -1.98
UBP11YKR098C BRE1Q07457 700 aaKnown RBP2.71□□□□□ -1.98
UBP11YKR098C PUS1Q12211 544 aaKnown RBP2.71□□□□□ -1.98
UBP11YKR098C IME1P21190 360 aa2.7□□□□□ -1.98
UBP11YKR098C ADE2P21264 571 aaKnown RBP2.7□□□□□ -1.98
UBP11YKR098C MEF2P39677 819 aa2.7□□□□□ -1.98
UBP11YKR098C YIL092WP40497 633 aa2.7□□□□□ -1.98
UBP11YKR098C ASK10P48361 1146 aa2.7□□□□□ -1.98
UBP11YKR098C PUS4P48567 403 aaKnown RBP2.7□□□□□ -1.98
UBP11YKR098C PRP31P49704 494 aaPredicted RBP2.7□□□□□ -1.98
UBP11YKR098C YBP2P53169 641 aa2.7□□□□□ -1.98
UBP11YKR098C VPS62P53285 467 aa2.7□□□□□ -1.98
UBP11YKR098C RCR2Q03446 210 aaKnown RBP2.7□□□□□ -1.98
UBP11YKR098C STP4Q07351 490 aa2.7□□□□□ -1.98
UBP11YKR098C ISA1Q07821 250 aaPredicted RBP2.7□□□□□ -1.98
UBP11YKR098C PSR2Q07949 397 aa2.7□□□□□ -1.98
UBP11YKR098C SWM1Q12379 170 aa2.7□□□□□ -1.98
UBP11YKR098C ACO1P19414 778 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
UBP11YKR098C EMC1P25574 760 aa2.7□□□□□ -1.98
UBP11YKR098C PET309P32522 965 aaPredicted RBP2.7□□□□□ -1.98
UBP11YKR098C PUB1P32588 453 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
UBP11YKR098C SIC1P38634 284 aa2.7□□□□□ -1.98
UBP11YKR098C STL1P39932 569 aa2.7□□□□□ -1.98
UBP11YKR098C VID27P40157 782 aa2.7□□□□□ -1.98
UBP11YKR098C CTH1P47976 325 aa2.7□□□□□ -1.98
UBP11YKR098C TEP1P53916 434 aa2.7□□□□□ -1.98
UBP11YKR098C MOT3P54785 490 aaKnown RBP2.7□□□□□ -1.98
UBP11YKR098C ARG5,6Q01217 863 aa2.7□□□□□ -1.98
UBP11YKR098C MTD1Q02046 320 aaKnown RBP2.7□□□□□ -1.98
UBP11YKR098C PKH1Q03407 766 aa2.7□□□□□ -1.98
UBP11YKR098C HLR1Q04429 423 aa2.7□□□□□ -1.98
UBP11YKR098C BRE4Q07660 1125 aa2.7□□□□□ -1.98
UBP11YKR098C NOP12Q08208 459 aaKnown RBP2.7□□□□□ -1.98
UBP11YKR098C GPB1Q08886 897 aa2.7□□□□□ -1.98
UBP11YKR098C NUR1Q12066 484 aa2.7□□□□□ -1.98
UBP11YKR098C YLR415CO13578 112 aa2.69□□□□□ -1.98
UBP11YKR098C PYC1P11154 1178 aaKnown RBP2.69□□□□□ -1.98
UBP11YKR098C PHO3P24031 467 aa2.69□□□□□ -1.98
UBP11YKR098C APL2P36000 726 aaPredicted RBP2.69□□□□□ -1.98
UBP11YKR098C YBR259WP38338 688 aa2.69□□□□□ -1.98
UBP11YKR098C YHR112CP38716 378 aa2.69□□□□□ -1.98
UBP11YKR098C DUN1P39009 513 aa2.69□□□□□ -1.98
UBP11YKR098C SAP185P40856 1058 aa2.69□□□□□ -1.98
UBP11YKR098C EXG2P52911 562 aa2.69□□□□□ -1.98
UBP11YKR098C MRPL22P53881 309 aa2.69□□□□□ -1.98
UBP11YKR098C HMO1Q03973 246 aaKnown RBP2.69□□□□□ -1.98
UBP11YKR098C VHS3Q08438 674 aa2.69□□□□□ -1.98
UBP11YKR098C YOR352WQ08816 343 aa2.69□□□□□ -1.98
UBP11YKR098C NPC2Q12408 173 aa2.69□□□□□ -1.98
UBP11YKR098C YEL076C-AP0CX16 216 aa2.68□□□□□ -1.98
UBP11YKR098C YLR464WP0CX17 216 aa2.68□□□□□ -1.98
UBP11YKR098C FRS1P15624 595 aaKnown RBP2.68□□□□□ -1.98
UBP11YKR098C SEC18P18759 758 aaKnown RBP2.68□□□□□ -1.98
UBP11YKR098C DGR2P32330 852 aa2.68□□□□□ -1.98
UBP11YKR098C NGG1P32494 702 aa2.68□□□□□ -1.98
UBP11YKR098C PET127P32606 800 aa2.68□□□□□ -1.98
UBP11YKR098C YPT7P32939 208 aa2.68□□□□□ -1.98
UBP11YKR098C YEL076CP39971 216 aa2.68□□□□□ -1.98
UBP11YKR098C ENP2P48234 707 aaKnown RBP2.68□□□□□ -1.98
UBP11YKR098C MRPS35P53292 345 aa2.68□□□□□ -1.98
UBP11YKR098C REC102Q02721 264 aa2.68□□□□□ -1.98
UBP11YKR098C GCN5Q03330 439 aa2.68□□□□□ -1.98
UBP11YKR098C YAP6Q03935 383 aa2.68□□□□□ -1.98
UBP11YKR098C TMA64Q04600 565 aaKnown RBP2.68□□□□□ -1.98
UBP11YKR098C CIA1Q05583 330 aa2.68□□□□□ -1.98
UBP11YKR098C MCM21Q06675 368 aa2.68□□□□□ -1.98
UBP11YKR098C PEX19Q07418 342 aa2.68□□□□□ -1.98
UBP11YKR098C RXT3Q07458 294 aa2.68□□□□□ -1.98
UBP11YKR098C PSF3Q12146 194 aa2.68□□□□□ -1.98
UBP11YKR098C ARP7Q12406 477 aa2.68□□□□□ -1.98
UBP11YKR098C KCS1Q12494 1050 aa2.68□□□□□ -1.98
UBP11YKR098C PHO81P17442 1178 aa2.68□□□□□ -1.98
UBP11YKR098C MSM1P22438 575 aa2.68□□□□□ -1.98
UBP11YKR098C RPP1P38786 293 aa2.68□□□□□ -1.98
UBP11YKR098C ECM1P39715 212 aa2.68□□□□□ -1.98
UBP11YKR098C SAW1P39735 261 aa2.68□□□□□ -1.98
UBP11YKR098C SCS2P40075 244 aaKnown RBP2.68□□□□□ -1.98
UBP11YKR098C YNL195CP40168 261 aa2.68□□□□□ -1.98
UBP11YKR098C MAD2P40958 196 aa2.68□□□□□ -1.98
UBP11YKR098C ERR3P42222 437 aa2.68□□□□□ -1.98
UBP11YKR098C YML131WQ03102 365 aa2.68□□□□□ -1.98
UBP11YKR098C YDR132CQ03900 495 aa2.68□□□□□ -1.98
UBP11YKR098C HIM1Q06674 414 aa2.68□□□□□ -1.98
UBP11YKR098C ACK1Q07622 623 aaPredicted RBP2.68□□□□□ -1.98
UBP11YKR098C RTK1Q12100 620 aaPredicted RBP2.68□□□□□ -1.98
UBP11YKR098C DFG16Q99234 619 aa2.68□□□□□ -1.98
UBP11YKR098C ADH4P10127 382 aa2.67□□□□□ -1.98
UBP11YKR098C MSH1P25846 959 aa2.67□□□□□ -1.98
UBP11YKR098C CDC20P26309 610 aa2.67□□□□□ -1.98
UBP11YKR098C TGL1P34163 548 aa2.67□□□□□ -1.98
UBP11YKR098C CTF13P35203 478 aa2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 106.5 ms