RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W LCB5Q06147 687 aaKnown RBP7.9□□□□□ -1.14
PEX28YHR150W TYW1Q08960 810 aaKnown RBP7.9□□□□□ -1.14
PEX28YHR150W CMD1P06787 147 aaKnown RBP7.89□□□□□ -1.15
PEX28YHR150W ILV2P07342 687 aaKnown RBP7.89□□□□□ -1.15
PEX28YHR150W HEM15P16622 393 aa7.89□□□□□ -1.15
PEX28YHR150W IME1P21190 360 aa7.89□□□□□ -1.15
PEX28YHR150W DBP7P36120 742 aaKnown RBP7.89□□□□□ -1.15
PEX28YHR150W BSD2P38356 321 aa7.89□□□□□ -1.15
PEX28YHR150W SIC1P38634 284 aa7.89□□□□□ -1.15
PEX28YHR150W SCD6P45978 349 aaKnown RBP RIP-Chip data7.89□□□□□ -1.15not detected
PEX28YHR150W YNL146WP53906 100 aa7.89□□□□□ -1.15
PEX28YHR150W RPA49Q01080 415 aaPredicted RBP7.89□□□□□ -1.15
PEX28YHR150W PRP3Q03338 469 aaPredicted RBP7.89□□□□□ -1.15
PEX28YHR150W SHE9Q04172 456 aa7.89□□□□□ -1.15
PEX28YHR150W TRM11Q12463 433 aa7.89□□□□□ -1.15
PEX28YHR150W SEC39Q12745 709 aa7.89□□□□□ -1.15
PEX28YHR150W TY4A-HQ6Q5P6 413 aa7.89□□□□□ -1.15
PEX28YHR150W SSA4P22202 642 aaKnown RBP7.89□□□□□ -1.15
PEX28YHR150W MRPL25P23369 157 aa7.89□□□□□ -1.15
PEX28YHR150W SWI3P32591 825 aa7.89□□□□□ -1.15
PEX28YHR150W GYP6P32806 458 aa7.89□□□□□ -1.15
PEX28YHR150W ASH1P34233 588 aa7.89□□□□□ -1.15
PEX28YHR150W CSG2P35206 410 aa7.89□□□□□ -1.15
PEX28YHR150W NPP2P39997 493 aa7.89□□□□□ -1.15
PEX28YHR150W CPR7P47103 393 aa7.89□□□□□ -1.15
PEX28YHR150W ORC5P50874 479 aa7.89□□□□□ -1.15
PEX28YHR150W UBX4P54730 416 aa7.89□□□□□ -1.15
PEX28YHR150W VPS72Q03388 795 aa7.89□□□□□ -1.15
PEX28YHR150W OSW1Q08692 278 aa7.89□□□□□ -1.15
PEX28YHR150W CDC53Q12018 815 aaKnown RBP7.89□□□□□ -1.15
PEX28YHR150W GNT1Q12096 491 aa7.89□□□□□ -1.15
PEX28YHR150W RRD2Q12461 358 aa7.89□□□□□ -1.15
PEX28YHR150W YML002WP0CF17 737 aa7.88□□□□□ -1.15
PEX28YHR150W YMR085WP0CF18 432 aa7.88□□□□□ -1.15
PEX28YHR150W AEP2P22136 580 aa7.88□□□□□ -1.15
PEX28YHR150W MGT1P26188 188 aa7.88□□□□□ -1.15
PEX28YHR150W STE13P33894 931 aa7.88□□□□□ -1.15
PEX28YHR150W VID24P38263 362 aa7.88□□□□□ -1.15
PEX28YHR150W POP4P38336 279 aa7.88□□□□□ -1.15
PEX28YHR150W SPR3P41901 512 aa7.88□□□□□ -1.15
PEX28YHR150W EMW1P42842 904 aaKnown RBP7.88□□□□□ -1.15
PEX28YHR150W CUL3P53202 744 aa7.88□□□□□ -1.15
PEX28YHR150W YNL040WP53960 456 aaPredicted RBP7.88□□□□□ -1.15
PEX28YHR150W IWR1Q07532 353 aaPredicted RBP7.88□□□□□ -1.15
PEX28YHR150W TY3A-GQ12173 290 aa7.88□□□□□ -1.15
PEX28YHR150W TY3A-IQ99219 290 aa7.88□□□□□ -1.15
PEX28YHR150W PMS1P14242 873 aa7.87□□□□□ -1.15
PEX28YHR150W YUR1P26725 428 aa7.87□□□□□ -1.15
PEX28YHR150W EFB1P32471 206 aaKnown RBP7.87□□□□□ -1.15
PEX28YHR150W PAM1P37304 830 aaKnown RBP7.87□□□□□ -1.15
PEX28YHR150W YBR032WP38223 100 aa7.87□□□□□ -1.15
PEX28YHR150W SBE2P42223 864 aaKnown RBP7.87□□□□□ -1.15
PEX28YHR150W RSM26P47141 266 aa7.87□□□□□ -1.15
PEX28YHR150W ASN1P49089 572 aaKnown RBP7.87□□□□□ -1.15
PEX28YHR150W YML6P51998 286 aa7.87□□□□□ -1.15
PEX28YHR150W SHE10P53075 577 aa7.87□□□□□ -1.15
PEX28YHR150W DRN1P53255 507 aaKnown RBP7.87□□□□□ -1.15
PEX28YHR150W COG6P53959 839 aa7.87□□□□□ -1.15
PEX28YHR150W STE20Q03497 939 aaKnown RBP7.87□□□□□ -1.15
PEX28YHR150W YMR027WQ04371 470 aa7.87□□□□□ -1.15
PEX28YHR150W SHS1Q07657 551 aa7.87□□□□□ -1.15
PEX28YHR150W HVG1P0CE11 249 aa7.86□□□□□ -1.15
PEX28YHR150W SFL1P20134 766 aa7.86□□□□□ -1.15
PEX28YHR150W RNR1P21524 888 aaKnown RBP7.86□□□□□ -1.15
PEX28YHR150W TPS2P31688 896 aaKnown RBP7.86□□□□□ -1.15
PEX28YHR150W EFT1P32324 842 aaKnown RBP7.86□□□□□ -1.15
PEX28YHR150W SSE1P32589 693 aaKnown RBP7.86□□□□□ -1.15
PEX28YHR150W FZO1P38297 855 aa7.86□□□□□ -1.15
PEX28YHR150W FTR1P40088 404 aa7.86□□□□□ -1.15
PEX28YHR150W ALA1P40825 983 aaKnown RBP7.86□□□□□ -1.15
PEX28YHR150W MKT1P40850 830 aaKnown RBP7.86□□□□□ -1.15
PEX28YHR150W UBP6P43593 499 aaKnown RBP7.86□□□□□ -1.15
PEX28YHR150W PHO86P46956 311 aa7.86□□□□□ -1.15
PEX28YHR150W INP52P50942 1183 aa7.86□□□□□ -1.15
PEX28YHR150W NNF2P53253 936 aa7.86□□□□□ -1.15
PEX28YHR150W PPM1Q04081 328 aa7.86□□□□□ -1.15
PEX28YHR150W RAD10P06838 210 aa7.86□□□□□ -1.15
PEX28YHR150W RAD3P06839 778 aa7.86□□□□□ -1.15
PEX28YHR150W MAS2P11914 482 aa7.86□□□□□ -1.15
PEX28YHR150W MLS1P30952 554 aa7.86□□□□□ -1.15
PEX28YHR150W RGT1P32862 1170 aa7.86□□□□□ -1.15
PEX28YHR150W TRM2P33753 639 aa7.86□□□□□ -1.15
PEX28YHR150W APE3P37302 537 aaKnown RBP7.86□□□□□ -1.15
PEX28YHR150W HSM3P38348 480 aa7.86□□□□□ -1.15
PEX28YHR150W DYS1P38791 387 aa7.86□□□□□ -1.15
PEX28YHR150W ERP5P38819 212 aa7.86□□□□□ -1.15
PEX28YHR150W AIM21P40563 679 aa7.86□□□□□ -1.15
PEX28YHR150W SEC26P41810 973 aaKnown RBP7.86□□□□□ -1.15
PEX28YHR150W YNL144CP53907 740 aa7.86□□□□□ -1.15
PEX28YHR150W YOR059CQ08448 450 aaKnown RBP7.86□□□□□ -1.15
PEX28YHR150W NAT1P12945 854 aaKnown RBP7.85□□□□□ -1.15
PEX28YHR150W CDC42P19073 191 aa7.85□□□□□ -1.15
PEX28YHR150W PWP1P21304 576 aaKnown RBP7.85□□□□□ -1.15
PEX28YHR150W SEC14P24280 304 aaKnown RBP7.85□□□□□ -1.15
PEX28YHR150W SMY2P32909 740 aaKnown RBP7.85□□□□□ -1.15
PEX28YHR150W SEG2P34250 1132 aa7.85□□□□□ -1.15
PEX28YHR150W DUG2P38149 878 aa7.85□□□□□ -1.15
PEX28YHR150W GUA1P38625 525 aaKnown RBP7.85□□□□□ -1.15
PEX28YHR150W CBR1P38626 284 aaKnown RBP7.85□□□□□ -1.15
PEX28YHR150W RSC30P38781 883 aa7.85□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 84.4 ms