RNA–Protein interactions for RNA: YGL244W

RTF1, Transcript of Subunit of RNAPII-associated chromatin remodeling Paf1 complex, yeast

Gene RTF1, Length 1,677 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTF1	YGL244W	PFK26	P40433	827 aa	Known RBP	11.94	□□□□□ -0.5
RTF1	YGL244W	PHO86	P46956	311 aa		11.94	□□□□□ -0.5
RTF1	YGL244W	TAM41	P53230	385 aa		11.94	□□□□□ -0.5
RTF1	YGL244W	DAK1	P54838	584 aa	Known RBP	11.94	□□□□□ -0.5
RTF1	YGL244W	PTA1	Q01329	785 aa	Predicted RBP	11.94	□□□□□ -0.5
RTF1	YGL244W	MSH6	Q03834	1242 aa		11.94	□□□□□ -0.5
RTF1	YGL244W	IVY1	Q04934	453 aa		11.94	□□□□□ -0.5
RTF1	YGL244W	YLR053C	Q12026	108 aa		11.94	□□□□□ -0.5
RTF1	YGL244W	RAD10	P06838	210 aa		11.93	□□□□□ -0.5
RTF1	YGL244W	AAD3	P25612	363 aa		11.93	□□□□□ -0.5
RTF1	YGL244W	CBF2	P32504	956 aa		11.93	□□□□□ -0.5
RTF1	YGL244W	PEX2	P32800	271 aa		11.93	□□□□□ -0.5
RTF1	YGL244W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	11.93	□□□□□ -0.5	not detected
RTF1	YGL244W	ERC1	P38767	581 aa		11.93	□□□□□ -0.5
RTF1	YGL244W	BEM4	P39011	633 aa		11.93	□□□□□ -0.5
RTF1	YGL244W	VHR2	P40041	505 aa		11.93	□□□□□ -0.5
RTF1	YGL244W	USE1	P53146	245 aa		11.93	□□□□□ -0.5
RTF1	YGL244W	YNL011C	P53980	444 aa		11.93	□□□□□ -0.5
RTF1	YGL244W	FMN1	Q03778	218 aa		11.93	□□□□□ -0.5
RTF1	YGL244W	RUP1	Q12242	671 aa		11.93	□□□□□ -0.5
RTF1	YGL244W	BUD31	P25337	157 aa	Predicted RBP	11.92	□□□□□ -0.5
RTF1	YGL244W	SEG2	P34250	1132 aa		11.92	□□□□□ -0.5
RTF1	YGL244W	CDC27	P38042	758 aa		11.92	□□□□□ -0.5
RTF1	YGL244W	SMF2	P38778	549 aa		11.92	□□□□□ -0.5
RTF1	YGL244W	AIM21	P40563	679 aa		11.92	□□□□□ -0.5
RTF1	YGL244W	CPR7	P47103	393 aa		11.92	□□□□□ -0.5
RTF1	YGL244W	STE20	Q03497	939 aa	Known RBP	11.92	□□□□□ -0.5
RTF1	YGL244W	RGA2	Q06407	1009 aa		11.92	□□□□□ -0.5
RTF1	YGL244W	CDC73	Q06697	393 aa		11.92	□□□□□ -0.5
RTF1	YGL244W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	11.92	□□□□□ -0.5	not detected
RTF1	YGL244W	TRE1	Q08919	783 aa		11.92	□□□□□ -0.5
RTF1	YGL244W	ENO2	P00925	437 aa	Known RBP	11.91	□□□□□ -0.5
RTF1	YGL244W	ILS1	P09436	1072 aa	Known RBP	11.91	□□□□□ -0.5
RTF1	YGL244W	MRM1	P25270	412 aa		11.91	□□□□□ -0.5
RTF1	YGL244W	PUP2	P32379	260 aa		11.91	□□□□□ -0.5
RTF1	YGL244W	ABD1	P32783	436 aa	Predicted RBP	11.91	□□□□□ -0.5
RTF1	YGL244W	ATG19	P35193	415 aa		11.91	□□□□□ -0.5
RTF1	YGL244W	RNR4	P49723	345 aa	Known RBP	11.91	□□□□□ -0.5
RTF1	YGL244W	NOP15	P53927	220 aa	Predicted RBP	11.91	□□□□□ -0.5
RTF1	YGL244W	CEF1	Q03654	590 aa	Predicted RBP	11.91	□□□□□ -0.5
RTF1	YGL244W	PRM6	Q04705	352 aa		11.91	□□□□□ -0.5
RTF1	YGL244W	DUS4	Q06063	367 aa		11.91	□□□□□ -0.5
RTF1	YGL244W	SSC1	P0CS90	654 aa	Known RBP	11.91	□□□□□ -0.5
RTF1	YGL244W	VMA1	P17255	1071 aa	Known RBP	11.91	□□□□□ -0.5
RTF1	YGL244W	EXO70	P19658	623 aa		11.91	□□□□□ -0.5
RTF1	YGL244W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	11.91	□□□□□ -0.5	not detected
RTF1	YGL244W	ERT1	P38140	529 aa		11.91	□□□□□ -0.5
RTF1	YGL244W	SAE2	P46946	345 aa		11.91	□□□□□ -0.5
RTF1	YGL244W	MTC3	P53077	123 aa		11.91	□□□□□ -0.5
RTF1	YGL244W	LSC1	P53598	329 aa	Known RBP	11.91	□□□□□ -0.5
RTF1	YGL244W	TBF1	Q02457	562 aa		11.91	□□□□□ -0.5
RTF1	YGL244W	ACL4	Q03771	387 aa		11.91	□□□□□ -0.5
RTF1	YGL244W	CRD1	Q07560	283 aa		11.91	□□□□□ -0.5
RTF1	YGL244W	YDR018C	Q12185	396 aa		11.91	□□□□□ -0.5
RTF1	YGL244W	RNR1	P21524	888 aa	Known RBP	11.9	□□□□□ -0.5
RTF1	YGL244W	SEC6	P32844	805 aa		11.9	□□□□□ -0.5
RTF1	YGL244W	PHO88	P38264	188 aa	Predicted RBP	11.9	□□□□□ -0.5
RTF1	YGL244W	MSR1	P38714	643 aa		11.9	□□□□□ -0.5
RTF1	YGL244W	DYS1	P38791	387 aa		11.9	□□□□□ -0.5
RTF1	YGL244W	SCS2	P40075	244 aa	Known RBP	11.9	□□□□□ -0.5
RTF1	YGL244W	PRK1	P40494	810 aa		11.9	□□□□□ -0.5
RTF1	YGL244W	CTR1	P49573	406 aa		11.9	□□□□□ -0.5
RTF1	YGL244W	HSH155	P49955	971 aa	Known RBP	11.9	□□□□□ -0.5
RTF1	YGL244W	OSH6	Q02201	448 aa		11.9	□□□□□ -0.5
RTF1	YGL244W	HMO1	Q03973	246 aa	Known RBP	11.9	□□□□□ -0.5
RTF1	YGL244W	CDC24	P11433	854 aa	Predicted RBP	11.89	□□□□□ -0.51
RTF1	YGL244W	NPP1	P25353	742 aa		11.89	□□□□□ -0.51
RTF1	YGL244W	MCM5	P29496	775 aa	Known RBP	11.89	□□□□□ -0.51
RTF1	YGL244W	APM2	P38700	605 aa		11.89	□□□□□ -0.51
RTF1	YGL244W	TAF1	P46677	1066 aa		11.89	□□□□□ -0.51
RTF1	YGL244W	FMP33	P46998	180 aa		11.89	□□□□□ -0.51
RTF1	YGL244W	MIG2	P53035	382 aa		11.89	□□□□□ -0.51
RTF1	YGL244W	DRN1	P53255	507 aa	Known RBP	11.89	□□□□□ -0.51
RTF1	YGL244W	YLR326W	Q06170	240 aa	Known RBP	11.89	□□□□□ -0.51
RTF1	YGL244W	IWR1	Q07532	353 aa	Predicted RBP	11.89	□□□□□ -0.51
RTF1	YGL244W	BI2	P03873	423 aa		11.88	□□□□□ -0.51
RTF1	YGL244W	BI4	P03879	638 aa		11.88	□□□□□ -0.51
RTF1	YGL244W	ERG12	P07277	443 aa		11.88	□□□□□ -0.51
RTF1	YGL244W	PDR1	P12383	1068 aa		11.88	□□□□□ -0.51
RTF1	YGL244W	TYR1	P20049	452 aa		11.88	□□□□□ -0.51
RTF1	YGL244W	GYP6	P32806	458 aa		11.88	□□□□□ -0.51
RTF1	YGL244W	ECM4	P36156	370 aa		11.88	□□□□□ -0.51
RTF1	YGL244W	YHL008C	P38750	627 aa		11.88	□□□□□ -0.51
RTF1	YGL244W	NPP2	P39997	493 aa		11.88	□□□□□ -0.51
RTF1	YGL244W	UTP7	P40055	554 aa	Known RBP	11.88	□□□□□ -0.51
RTF1	YGL244W	TMN3	P40071	706 aa		11.88	□□□□□ -0.51
RTF1	YGL244W	MKT1	P40850	830 aa	Known RBP	11.88	□□□□□ -0.51
RTF1	YGL244W	PAN2	P53010	1115 aa	Predicted RBP	11.88	□□□□□ -0.51
RTF1	YGL244W	RPM2	Q02773	1202 aa		11.88	□□□□□ -0.51
RTF1	YGL244W	ADI1	Q03677	179 aa		11.88	□□□□□ -0.51
RTF1	YGL244W	SPE4	Q12455	300 aa		11.88	□□□□□ -0.51
RTF1	YGL244W	BI3	Q9ZZW7	517 aa		11.88	□□□□□ -0.51
RTF1	YGL244W	ICL1	P28240	557 aa	Predicted RBP	11.87	□□□□□ -0.51
RTF1	YGL244W	AST1	P35183	429 aa		11.87	□□□□□ -0.51
RTF1	YGL244W	HLJ1	P48353	224 aa		11.87	□□□□□ -0.51
RTF1	YGL244W	BIO4	P53630	237 aa		11.87	□□□□□ -0.51
RTF1	YGL244W	FAP7	Q12055	197 aa	Predicted RBP	11.87	□□□□□ -0.51
RTF1	YGL244W	AI5_BETA	Q9ZZX0	354 aa		11.87	□□□□□ -0.51
RTF1	YGL244W	CDC42	P19073	191 aa		11.87	□□□□□ -0.51
RTF1	YGL244W	EFT1	P32324	842 aa	Known RBP	11.87	□□□□□ -0.51

Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms