RNA–Protein interactions for RNA: YFR051C

RET2, Transcript of Delta subunit of the coatomer complex (COPI), yeast

Gene RET2, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RET2	YFR051C	TSR1	Q07381	788 aa	Known RBP	10.75	□□□□□ -0.69
RET2	YFR051C	DAP1	Q12091	152 aa		10.75	□□□□□ -0.69
RET2	YFR051C	LRE1	P25579	583 aa	Known RBP	10.74	□□□□□ -0.69
RET2	YFR051C	TRZ1	P36159	838 aa	Predicted RBP	10.74	□□□□□ -0.69
RET2	YFR051C	RDH54	P38086	958 aa		10.74	□□□□□ -0.69
RET2	YFR051C	DSE1	P40077	573 aa		10.74	□□□□□ -0.69
RET2	YFR051C	IES1	P43579	692 aa		10.74	□□□□□ -0.69
RET2	YFR051C	VPS70	P47161	811 aa		10.74	□□□□□ -0.69
RET2	YFR051C	GPD1	Q00055	391 aa	Known RBP	10.74	□□□□□ -0.69
RET2	YFR051C	JNM1	P36224	373 aa		10.73	□□□□□ -0.69
RET2	YFR051C	YBR056W	P38081	501 aa		10.73	□□□□□ -0.69
RET2	YFR051C	SMC2	P38989	1170 aa	Known RBP	10.73	□□□□□ -0.69
RET2	YFR051C	MOB1	P40484	314 aa		10.73	□□□□□ -0.69
RET2	YFR051C	MMM1	P41800	426 aa		10.73	□□□□□ -0.69
RET2	YFR051C	YER152C	P10356	443 aa		10.73	□□□□□ -0.69
RET2	YFR051C	PEP7	P32609	515 aa		10.73	□□□□□ -0.69
RET2	YFR051C	BFA1	P47113	574 aa		10.73	□□□□□ -0.69
RET2	YFR051C	VPS25	P47142	202 aa		10.73	□□□□□ -0.69
RET2	YFR051C	MND1	P53102	219 aa		10.73	□□□□□ -0.69
RET2	YFR051C	YNL011C	P53980	444 aa		10.73	□□□□□ -0.69
RET2	YFR051C	HMI1	Q12039	706 aa		10.73	□□□□□ -0.69
RET2	YFR051C	ATG9	Q12142	997 aa		10.73	□□□□□ -0.69
RET2	YFR051C	PPR1	P07272	904 aa	Predicted RBP	10.72	□□□□□ -0.69
RET2	YFR051C	VMA4	P22203	233 aa	Known RBP	10.72	□□□□□ -0.69
RET2	YFR051C	SIF2	P38262	535 aa		10.72	□□□□□ -0.69
RET2	YFR051C	EXO5	P38289	585 aa		10.72	□□□□□ -0.69
RET2	YFR051C	CBR1	P38626	284 aa	Known RBP	10.72	□□□□□ -0.69
RET2	YFR051C	SHQ1	P40486	507 aa	Predicted RBP	10.72	□□□□□ -0.69
RET2	YFR051C	YAP5	P40574	245 aa		10.72	□□□□□ -0.69
RET2	YFR051C	TRE1	Q08919	783 aa		10.72	□□□□□ -0.69
RET2	YFR051C	YOL098C	Q12496	1037 aa		10.72	□□□□□ -0.69
RET2	YFR051C	JIP3	O13555	125 aa		10.71	□□□□□ -0.69
RET2	YFR051C	TRP2	P00899	507 aa	Known RBP	10.71	□□□□□ -0.69
RET2	YFR051C	HMG2	P12684	1045 aa		10.71	□□□□□ -0.69
RET2	YFR051C	APE1	P14904	514 aa		10.71	□□□□□ -0.69
RET2	YFR051C	SPO12	P17123	173 aa		10.71	□□□□□ -0.69
RET2	YFR051C	PDC6	P26263	563 aa	Known RBP	10.71	□□□□□ -0.69
RET2	YFR051C	GYP6	P32806	458 aa		10.71	□□□□□ -0.69
RET2	YFR051C	PXL1	P36166	706 aa		10.71	□□□□□ -0.69
RET2	YFR051C	SAF1	P38352	637 aa		10.71	□□□□□ -0.69
RET2	YFR051C	HXT8	P40886	569 aa		10.71	□□□□□ -0.69
RET2	YFR051C	YJL045W	P47052	634 aa		10.71	□□□□□ -0.69
RET2	YFR051C	STR2	P47164	639 aa		10.71	□□□□□ -0.69
RET2	YFR051C	RPS3	P05750	240 aa	Known RBP	10.7	□□□□□ -0.7
RET2	YFR051C	SPT5	P27692	1063 aa	Known RBP	10.7	□□□□□ -0.7
RET2	YFR051C	MET4	P32389	672 aa		10.7	□□□□□ -0.7
RET2	YFR051C	YMC2	P38087	329 aa		10.7	□□□□□ -0.7
RET2	YFR051C	RAD55	P38953	406 aa		10.7	□□□□□ -0.7
RET2	YFR051C	RPT2	P40327	437 aa	Known RBP	10.7	□□□□□ -0.7
RET2	YFR051C	PHO86	P46956	311 aa		10.7	□□□□□ -0.7
RET2	YFR051C	SLG1	P54867	378 aa		10.7	□□□□□ -0.7
RET2	YFR051C	YEL075C	P39972	122 aa		10.69	□□□□□ -0.7
RET2	YFR051C	ATG3	P40344	310 aa		10.69	□□□□□ -0.7
RET2	YFR051C	CTR9	P89105	1077 aa		10.69	□□□□□ -0.7
RET2	YFR051C	HER2	Q03557	464 aa		10.69	□□□□□ -0.7
RET2	YFR051C	ARO80	Q04052	950 aa		10.69	□□□□□ -0.7
RET2	YFR051C	OPY2	Q06810	360 aa		10.69	□□□□□ -0.7
RET2	YFR051C	MDM38	Q08179	573 aa		10.69	□□□□□ -0.7
RET2	YFR051C	DDC1	Q08949	612 aa		10.69	□□□□□ -0.7
RET2	YFR051C	NBP2	Q12163	236 aa		10.69	□□□□□ -0.7
RET2	YFR051C	CYC8	P14922	966 aa		10.69	□□□□□ -0.7
RET2	YFR051C	CDC27	P38042	758 aa		10.69	□□□□□ -0.7
RET2	YFR051C	RIM4	P38741	713 aa		10.69	□□□□□ -0.7
RET2	YFR051C	YTA12	P40341	825 aa		10.69	□□□□□ -0.7
RET2	YFR051C	GUF1	P46943	645 aa		10.69	□□□□□ -0.7
RET2	YFR051C	PFD1	P46988	109 aa		10.69	□□□□□ -0.7
RET2	YFR051C	ASG7	P46993	209 aa		10.69	□□□□□ -0.7
RET2	YFR051C	HOP2	P53187	214 aa		10.69	□□□□□ -0.7
RET2	YFR051C	FMP25	Q08023	583 aa		10.69	□□□□□ -0.7
RET2	YFR051C	SGO1	Q08490	590 aa		10.69	□□□□□ -0.7
RET2	YFR051C	SAM3	Q08986	587 aa		10.69	□□□□□ -0.7
RET2	YFR051C	APL4	Q12028	832 aa		10.69	□□□□□ -0.7
RET2	YFR051C	VPS54	Q12071	889 aa		10.69	□□□□□ -0.7
RET2	YFR051C	PEX34	P25584	144 aa		10.68	□□□□□ -0.7
RET2	YFR051C	RRN6	P32786	894 aa		10.68	□□□□□ -0.7
RET2	YFR051C	YKL050C	P35736	922 aa		10.68	□□□□□ -0.7
RET2	YFR051C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	10.68	□□□□□ -0.7	not detected
RET2	YFR051C	RRD2	Q12461	358 aa		10.68	□□□□□ -0.7
RET2	YFR051C	RRP43	P25359	394 aa	Predicted RBP	10.67	□□□□□ -0.7
RET2	YFR051C	VTC4	P47075	721 aa		10.67	□□□□□ -0.7
RET2	YFR051C	UTP8	P53276	713 aa	Known RBP	10.67	□□□□□ -0.7
RET2	YFR051C	ERG5	P54781	538 aa		10.67	□□□□□ -0.7
RET2	YFR051C	MTD1	Q02046	320 aa	Known RBP	10.67	□□□□□ -0.7
RET2	YFR051C	UTP5	Q04177	643 aa	Known RBP	10.67	□□□□□ -0.7
RET2	YFR051C	NEW1	Q08972	1196 aa	Known RBP	10.67	□□□□□ -0.7
RET2	YFR051C	TSA1	P34760	196 aa	Known RBP	10.66	□□□□□ -0.7
RET2	YFR051C	YKR051W	P36142	418 aa		10.66	□□□□□ -0.7
RET2	YFR051C	YBL036C	P38197	257 aa		10.66	□□□□□ -0.7
RET2	YFR051C	QNS1	P38795	714 aa	Known RBP	10.66	□□□□□ -0.7
RET2	YFR051C	BTT1	P40314	149 aa	Predicted RBP	10.66	□□□□□ -0.7
RET2	YFR051C	NSE5	Q03718	556 aa		10.66	□□□□□ -0.7
RET2	YFR051C	RCL1	Q08096	367 aa	Predicted RBP	10.66	□□□□□ -0.7
RET2	YFR051C	MTF2	P10849	440 aa		10.66	□□□□□ -0.7
RET2	YFR051C	EBP2	P36049	427 aa	Known RBP	10.66	□□□□□ -0.7
RET2	YFR051C	SFB3	P38810	929 aa		10.66	□□□□□ -0.7
RET2	YFR051C	CDC1	P40986	491 aa		10.66	□□□□□ -0.7
RET2	YFR051C	GCN5	Q03330	439 aa		10.66	□□□□□ -0.7
RET2	YFR051C	YOR059C	Q08448	450 aa	Known RBP	10.66	□□□□□ -0.7
RET2	YFR051C	SPE3	Q12074	293 aa	Known RBP	10.66	□□□□□ -0.7
RET2	YFR051C	EMP46	Q12396	444 aa		10.66	□□□□□ -0.7

Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms