RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W TPK2P06245 380 aa2.48□□□□□ -2.01
YCK3YER123W MSD1P15179 658 aaKnown RBP2.48□□□□□ -2.01
YCK3YER123W BEM3P32873 1128 aa2.48□□□□□ -2.01
YCK3YER123W PCI8P40512 444 aa2.48□□□□□ -2.01
YCK3YER123W SHR5P41912 237 aa2.48□□□□□ -2.01
YCK3YER123W NUP53Q03790 475 aa2.48□□□□□ -2.01
YCK3YER123W JIP5Q06214 492 aaPredicted RBP2.48□□□□□ -2.01
YCK3YER123W MCM21Q06675 368 aa2.48□□□□□ -2.01
YCK3YER123W REH1Q06709 432 aa2.48□□□□□ -2.01
YCK3YER123W MDM20Q12387 796 aaKnown RBP2.48□□□□□ -2.01
YCK3YER123W YBR182C-AQ8TGU6 64 aa2.48□□□□□ -2.01
YCK3YER123W ASK1P35734 292 aa2.47□□□□□ -2.01
YCK3YER123W ERG6P25087 383 aaKnown RBP2.46□□□□□ -2.02
YCK3YER123W STE5P32917 917 aa2.46□□□□□ -2.02
YCK3YER123W MNT3P40549 630 aa2.46□□□□□ -2.02
YCK3YER123W ALR2P43553 858 aa2.46□□□□□ -2.02
YCK3YER123W ENP2P48234 707 aaKnown RBP2.46□□□□□ -2.02
YCK3YER123W PIP2P52960 996 aa2.46□□□□□ -2.02
YCK3YER123W ERG13P54839 491 aaKnown RBP2.46□□□□□ -2.02
YCK3YER123W SCW10Q04951 389 aa2.46□□□□□ -2.02
YCK3YER123W TSR4P25040 408 aa2.45□□□□□ -2.02
YCK3YER123W YAT2P40017 923 aa2.45□□□□□ -2.02
YCK3YER123W GET2P40056 285 aa2.45□□□□□ -2.02
YCK3YER123W PFD1P46988 109 aa2.45□□□□□ -2.02
YCK3YER123W ZDS1P50111 915 aaKnown RBP2.45□□□□□ -2.02
YCK3YER123W ATP23P53722 227 aa2.45□□□□□ -2.02
YCK3YER123W YDL086WQ07505 273 aa2.45□□□□□ -2.02
YCK3YER123W LAM4P38800 1345 aa2.45□□□□□ -2.02
YCK3YER123W TUP1P16649 713 aa2.44□□□□□ -2.02
YCK3YER123W PEX1P24004 1043 aa2.44□□□□□ -2.02
YCK3YER123W PMT6P42934 759 aa2.44□□□□□ -2.02
YCK3YER123W NMA2P53204 395 aa2.44□□□□□ -2.02
YCK3YER123W YGR283CP53336 341 aaPredicted RBP2.44□□□□□ -2.02
YCK3YER123W ARG7Q04728 441 aa2.44□□□□□ -2.02
YCK3YER123W FRE7Q12333 620 aa2.44□□□□□ -2.02
YCK3YER123W DIF1O13577 133 aa2.44□□□□□ -2.02
YCK3YER123W PRP28P23394 588 aa2.44□□□□□ -2.02
YCK3YER123W AAD3P25612 363 aa2.44□□□□□ -2.02
YCK3YER123W VAC8P39968 578 aa2.44□□□□□ -2.02
YCK3YER123W JHD1P40034 492 aa2.44□□□□□ -2.02
YCK3YER123W RLP7P40693 322 aaKnown RBP2.44□□□□□ -2.02
YCK3YER123W NMD5P46970 1048 aa2.44□□□□□ -2.02
YCK3YER123W ORC4P54791 529 aa2.44□□□□□ -2.02
YCK3YER123W YDR514CQ04408 483 aa2.44□□□□□ -2.02
YCK3YER123W NDD1Q08887 554 aa2.44□□□□□ -2.02
YCK3YER123W HBN1Q96VH4 193 aa2.44□□□□□ -2.02
YCK3YER123W YEL1P34225 687 aa2.43□□□□□ -2.02
YCK3YER123W APL3P38065 1025 aa2.43□□□□□ -2.02
YCK3YER123W YHR097CP38809 366 aaKnown RBP2.43□□□□□ -2.02
YCK3YER123W GYP8P43570 497 aa2.43□□□□□ -2.02
YCK3YER123W SNU71P53207 620 aaKnown RBP2.43□□□□□ -2.02
YCK3YER123W RNR1P21524 888 aaKnown RBP2.42□□□□□ -2.02
YCK3YER123W YBR184WP38299 523 aa2.42□□□□□ -2.02
YCK3YER123W SNO3P43544 222 aa2.42□□□□□ -2.02
YCK3YER123W ATG36P46983 293 aa2.42□□□□□ -2.02
YCK3YER123W UTP8P53276 713 aaKnown RBP2.42□□□□□ -2.02
YCK3YER123W ALD6P54115 500 aaKnown RBP2.42□□□□□ -2.02
YCK3YER123W REC102Q02721 264 aa2.42□□□□□ -2.02
YCK3YER123W TDA5Q06417 326 aaKnown RBP2.42□□□□□ -2.02
YCK3YER123W VPS36Q06696 566 aa2.42□□□□□ -2.02
YCK3YER123W BCS1P32839 456 aa2.41□□□□□ -2.02
YCK3YER123W SPF1P39986 1215 aaKnown RBP2.41□□□□□ -2.02
YCK3YER123W PIG2P40187 538 aa2.41□□□□□ -2.02
YCK3YER123W NGL2Q03264 515 aaKnown RBP2.41□□□□□ -2.02
YCK3YER123W YDR179W-AQ03983 463 aa2.41□□□□□ -2.02
YCK3YER123W PRS5Q12265 496 aaKnown RBP2.41□□□□□ -2.02
YCK3YER123W RAD18P10862 487 aa2.4□□□□□ -2.02
YCK3YER123W BIT2P38346 545 aa2.4□□□□□ -2.02
YCK3YER123W HMO1Q03973 246 aaKnown RBP2.4□□□□□ -2.02
YCK3YER123W FMP25Q08023 583 aa2.4□□□□□ -2.02
YCK3YER123W DIA2Q08496 732 aaPredicted RBP2.4□□□□□ -2.02
YCK3YER123W PEX6P33760 1030 aa2.4□□□□□ -2.03
YCK3YER123W UBP6P43593 499 aaKnown RBP2.4□□□□□ -2.03
YCK3YER123W HXT16P47185 567 aa2.4□□□□□ -2.03
YCK3YER123W YSH1Q06224 779 aaPredicted RBP2.4□□□□□ -2.03
YCK3YER123W UBX5Q06682 500 aa2.4□□□□□ -2.03
YCK3YER123W CHS5Q12114 671 aaKnown RBP2.4□□□□□ -2.03
YCK3YER123W RKI1Q12189 258 aa2.4□□□□□ -2.03
YCK3YER123W MRPL9P31334 269 aa2.39□□□□□ -2.03
YCK3YER123W CTP1P38152 299 aa2.39□□□□□ -2.03
YCK3YER123W MET30P39014 640 aa2.39□□□□□ -2.03
YCK3YER123W YGL117WP53133 265 aa2.39□□□□□ -2.03
YCK3YER123W YTH1Q06102 208 aaPredicted RBP2.39□□□□□ -2.03
YCK3YER123W THI22Q06490 572 aa2.39□□□□□ -2.03
YCK3YER123W SSF2Q12153 453 aaPredicted RBP2.39□□□□□ -2.03
YCK3YER123W SLX1P38324 304 aa2.38□□□□□ -2.03
YCK3YER123W MPS3P47069 682 aa2.38□□□□□ -2.03
YCK3YER123W NOP9P47077 666 aaKnown RBP2.38□□□□□ -2.03
YCK3YER123W CPR8P53728 308 aa2.38□□□□□ -2.03
YCK3YER123W RSC9Q03124 581 aa2.38□□□□□ -2.03
YCK3YER123W ATP25Q03153 612 aa2.38□□□□□ -2.03
YCK3YER123W MET7Q08645 548 aa2.38□□□□□ -2.03
YCK3YER123W WRS1Q12109 432 aaKnown RBP2.38□□□□□ -2.03
YCK3YER123W PAM1P37304 830 aaKnown RBP2.37□□□□□ -2.03
YCK3YER123W SDS24P38314 527 aa2.37□□□□□ -2.03
YCK3YER123W MIP6P38760 659 aaKnown RBP2.37□□□□□ -2.03
YCK3YER123W KHA1P40309 873 aa2.37□□□□□ -2.03
YCK3YER123W ERP6P53198 216 aa2.37□□□□□ -2.03
YCK3YER123W NAN1Q02931 896 aaKnown RBP2.37□□□□□ -2.03
YCK3YER123W SPO75Q07798 868 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 90.4 ms