RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	UGO1	Q03327	502 aa		5	□□□□□ -1.61
UBC8	YEL012W	LCD1	Q04377	747 aa		5	□□□□□ -1.61
UBC8	YEL012W	UTP14	Q04500	899 aa	Known RBP	5	□□□□□ -1.61
UBC8	YEL012W	MDM38	Q08179	573 aa		5	□□□□□ -1.61
UBC8	YEL012W	YDR524C-B	Q3E6R4	66 aa		5	□□□□□ -1.61
UBC8	YEL012W	YGR161W-C	Q3E744	92 aa		5	□□□□□ -1.61
UBC8	YEL012W	CYB2	P00175	591 aa		4.99	□□□□□ -1.61
UBC8	YEL012W	SRM1	P21827	482 aa		4.99	□□□□□ -1.61
UBC8	YEL012W	YUR1	P26725	428 aa		4.99	□□□□□ -1.61
UBC8	YEL012W	CHS3	P29465	1165 aa		4.99	□□□□□ -1.61
UBC8	YEL012W	PEX6	P33760	1030 aa		4.99	□□□□□ -1.61
UBC8	YEL012W	YBR238C	P38330	731 aa	Known RBP	4.99	□□□□□ -1.61
UBC8	YEL012W	NOC2	P39744	710 aa	Known RBP	4.99	□□□□□ -1.61
UBC8	YEL012W	CIT3	P43635	486 aa		4.99	□□□□□ -1.61
UBC8	YEL012W	TY4A-J	P47023	414 aa		4.99	□□□□□ -1.61
UBC8	YEL012W	YKE2	P52553	114 aa		4.99	□□□□□ -1.61
UBC8	YEL012W	RSC58	Q07979	502 aa		4.99	□□□□□ -1.61
UBC8	YEL012W	MCA1	Q08601	432 aa		4.99	□□□□□ -1.61
UBC8	YEL012W	ADE8	P04161	214 aa		4.98	□□□□□ -1.61
UBC8	YEL012W	ABZ1	P37254	787 aa	Predicted RBP	4.98	□□□□□ -1.61
UBC8	YEL012W	TAT1	P38085	619 aa		4.98	□□□□□ -1.61
UBC8	YEL012W	YNG2	P38806	282 aa	Known RBP	4.98	□□□□□ -1.61
UBC8	YEL012W	SLD5	Q03406	294 aa		4.98	□□□□□ -1.61
UBC8	YEL012W	YLR122C	Q12312	125 aa		4.98	□□□□□ -1.61
UBC8	YEL012W	MOT1	P32333	1867 aa		4.97	□□□□□ -1.61
UBC8	YEL012W	RAD18	P10862	487 aa		4.97	□□□□□ -1.61
UBC8	YEL012W	ACE2	P21192	770 aa		4.97	□□□□□ -1.61
UBC8	YEL012W	GCD7	P32502	381 aa	Predicted RBP	4.97	□□□□□ -1.61
UBC8	YEL012W	CCZ1	P38273	704 aa		4.97	□□□□□ -1.61
UBC8	YEL012W	FUN12	P39730	1002 aa	Known RBP	4.97	□□□□□ -1.61
UBC8	YEL012W	GYP8	P43570	497 aa		4.97	□□□□□ -1.61
UBC8	YEL012W	ALG2	P43636	503 aa		4.97	□□□□□ -1.61
UBC8	YEL012W	CTR1	P49573	406 aa		4.97	□□□□□ -1.61
UBC8	YEL012W	PIB2	P53191	635 aa		4.97	□□□□□ -1.61
UBC8	YEL012W	TFB2	Q02939	513 aa		4.97	□□□□□ -1.61
UBC8	YEL012W	TMA64	Q04600	565 aa	Known RBP	4.97	□□□□□ -1.61
UBC8	YEL012W	YLR001C	Q07895	862 aa		4.97	□□□□□ -1.61
UBC8	YEL012W	YOR059C	Q08448	450 aa	Known RBP	4.97	□□□□□ -1.61
UBC8	YEL012W	MYO1	P08964	1928 aa		4.97	□□□□□ -1.61
UBC8	YEL012W	SEN1	Q00416	2231 aa	Known RBP	4.96	□□□□□ -1.62
UBC8	YEL012W	RPP0	P05317	312 aa	Known RBP	4.96	□□□□□ -1.62
UBC8	YEL012W	TSR4	P25040	408 aa		4.96	□□□□□ -1.62
UBC8	YEL012W	PRO3	P32263	286 aa	Known RBP	4.96	□□□□□ -1.62
UBC8	YEL012W	SPC29	P33419	253 aa		4.96	□□□□□ -1.62
UBC8	YEL012W	YKR078W	P36158	585 aa	Known RBP	4.96	□□□□□ -1.62
UBC8	YEL012W	PHO88	P38264	188 aa	Predicted RBP	4.96	□□□□□ -1.62
UBC8	YEL012W	VID27	P40157	782 aa		4.96	□□□□□ -1.62
UBC8	YEL012W	YIL092W	P40497	633 aa		4.96	□□□□□ -1.62
UBC8	YEL012W	HFM1	P51979	1187 aa		4.96	□□□□□ -1.62
UBC8	YEL012W	YGR283C	P53336	341 aa	Predicted RBP	4.96	□□□□□ -1.62
UBC8	YEL012W	SFB2	P53953	876 aa		4.96	□□□□□ -1.62
UBC8	YEL012W	ALO1	P54783	526 aa	Known RBP	4.96	□□□□□ -1.62
UBC8	YEL012W	DAK1	P54838	584 aa	Known RBP	4.96	□□□□□ -1.62
UBC8	YEL012W	VPS72	Q03388	795 aa		4.96	□□□□□ -1.62
UBC8	YEL012W	YMR321C	Q04898	105 aa		4.96	□□□□□ -1.62
UBC8	YEL012W	SKG3	Q06315	1026 aa		4.96	□□□□□ -1.62
UBC8	YEL012W	XYL2	Q07993	356 aa		4.96	□□□□□ -1.62
UBC8	YEL012W	TRE1	Q08919	783 aa		4.96	□□□□□ -1.62
UBC8	YEL012W	ENV7	Q12003	364 aa		4.96	□□□□□ -1.62
UBC8	YEL012W	CHO2	P05374	869 aa	Known RBP	4.95	□□□□□ -1.62
UBC8	YEL012W	POX1	P13711	748 aa		4.95	□□□□□ -1.62
UBC8	YEL012W	MSB1	P21339	1137 aa	Known RBP	4.95	□□□□□ -1.62
UBC8	YEL012W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
UBC8	YEL012W	FUN30	P31380	1131 aa		4.95	□□□□□ -1.62
UBC8	YEL012W	REC104	P33323	182 aa		4.95	□□□□□ -1.62
UBC8	YEL012W	FLR1	P38124	548 aa		4.95	□□□□□ -1.62
UBC8	YEL012W	SEC26	P41810	973 aa	Known RBP	4.95	□□□□□ -1.62
UBC8	YEL012W	IRC8	P47046	822 aa		4.95	□□□□□ -1.62
UBC8	YEL012W	FOL2	P51601	243 aa	Known RBP	4.95	□□□□□ -1.62
UBC8	YEL012W	YGL242C	P53066	181 aa		4.95	□□□□□ -1.62
UBC8	YEL012W	YGL081W	P53156	320 aa		4.95	□□□□□ -1.62
UBC8	YEL012W	SUE1	Q06524	206 aa		4.95	□□□□□ -1.62
UBC8	YEL012W	ERP3	Q12403	225 aa		4.95	□□□□□ -1.62
UBC8	YEL012W	CDC9	P04819	755 aa		4.94	□□□□□ -1.62
UBC8	YEL012W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
UBC8	YEL012W	GCD1	P09032	578 aa	Predicted RBP	4.94	□□□□□ -1.62
UBC8	YEL012W	COQ1	P18900	473 aa		4.94	□□□□□ -1.62
UBC8	YEL012W	VBA3	P25594	458 aa		4.94	□□□□□ -1.62
UBC8	YEL012W	COQ2	P32378	372 aa		4.94	□□□□□ -1.62
UBC8	YEL012W	TGL1	P34163	548 aa		4.94	□□□□□ -1.62
UBC8	YEL012W	EMC3	P36039	253 aa		4.94	□□□□□ -1.62
UBC8	YEL012W	DBP7	P36120	742 aa	Known RBP	4.94	□□□□□ -1.62
UBC8	YEL012W	TOM71	P38825	639 aa	Known RBP	4.94	□□□□□ -1.62
UBC8	YEL012W	NDT80	P38830	627 aa		4.94	□□□□□ -1.62
UBC8	YEL012W	CRP1	P38845	465 aa	Known RBP	4.94	□□□□□ -1.62
UBC8	YEL012W	YER158C	P40095	573 aa		4.94	□□□□□ -1.62
UBC8	YEL012W	CCM1	P48237	864 aa	Predicted RBP	4.94	□□□□□ -1.62
UBC8	YEL012W	SDH1	Q00711	640 aa		4.94	□□□□□ -1.62
UBC8	YEL012W	SVS1	Q12254	260 aa		4.94	□□□□□ -1.62
UBC8	YEL012W	RIB2	Q12362	591 aa	Known RBP	4.94	□□□□□ -1.62
UBC8	YEL012W	RVB2	Q12464	471 aa	Known RBP	4.94	□□□□□ -1.62
UBC8	YEL012W	NOT3	P06102	836 aa	Known RBP	4.93	□□□□□ -1.62
UBC8	YEL012W	YKR018C	P36114	725 aa		4.93	□□□□□ -1.62
UBC8	YEL012W	PTC7	P38797	343 aa		4.93	□□□□□ -1.62
UBC8	YEL012W	JHD1	P40034	492 aa		4.93	□□□□□ -1.62
UBC8	YEL012W	VPS27	P40343	622 aa	Known RBP	4.93	□□□□□ -1.62
UBC8	YEL012W	GTS1	P40956	396 aa		4.93	□□□□□ -1.62
UBC8	YEL012W	SGM1	P47166	707 aa		4.93	□□□□□ -1.62
UBC8	YEL012W	SOL4	P53315	255 aa		4.93	□□□□□ -1.62
UBC8	YEL012W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 75.7 ms