RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS60, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS60YDR486C SKY1Q03656 742 aa11.39□□□□□ -0.59
VPS60YDR486C TIF35Q04067 274 aaKnown RBP11.39□□□□□ -0.59
VPS60YDR486C YMR114CQ04471 368 aaKnown RBP11.39□□□□□ -0.59
VPS60YDR486C BI3Q9ZZW7 517 aa11.39□□□□□ -0.59
VPS60YDR486C GFA1P14742 717 aaKnown RBP11.38□□□□□ -0.59
VPS60YDR486C SAT4P25333 603 aaKnown RBP11.38□□□□□ -0.59
VPS60YDR486C PAP1P29468 568 aaKnown RBP11.38□□□□□ -0.59
VPS60YDR486C YMC2P38087 329 aa11.38□□□□□ -0.59
VPS60YDR486C REI1P38344 393 aaPredicted RBP11.38□□□□□ -0.59
VPS60YDR486C HIS2P38635 335 aa11.38□□□□□ -0.59
VPS60YDR486C XDJ1P39102 459 aa11.38□□□□□ -0.59
VPS60YDR486C MND1P53102 219 aa11.38□□□□□ -0.59
VPS60YDR486C YDR278CQ05612 105 aa11.38□□□□□ -0.59
VPS60YDR486C GAL80P04387 435 aa11.37□□□□□ -0.59
VPS60YDR486C TPK1P06244 397 aa11.37□□□□□ -0.59
VPS60YDR486C HIP1P06775 603 aa11.37□□□□□ -0.59
VPS60YDR486C STE11P23561 717 aa11.37□□□□□ -0.59
VPS60YDR486C ADK2P26364 225 aa11.37□□□□□ -0.59
VPS60YDR486C DPB3P27344 201 aa11.37□□□□□ -0.59
VPS60YDR486C FRE1P32791 686 aa11.37□□□□□ -0.59
VPS60YDR486C MRPL7P36519 292 aa11.37□□□□□ -0.59
VPS60YDR486C CCL1P37366 393 aa11.37□□□□□ -0.59
VPS60YDR486C RCK2P38623 610 aa11.37□□□□□ -0.59
VPS60YDR486C YHR202WP38887 602 aa11.37□□□□□ -0.59
VPS60YDR486C DSE1P40077 573 aa11.37□□□□□ -0.59
VPS60YDR486C CEP3P40969 608 aa11.37□□□□□ -0.59
VPS60YDR486C ASG7P46993 209 aa11.37□□□□□ -0.59
VPS60YDR486C BRO1P48582 844 aa11.37□□□□□ -0.59
VPS60YDR486C HOP2P53187 214 aa11.37□□□□□ -0.59
VPS60YDR486C GYL1Q04322 720 aa11.37□□□□□ -0.59
VPS60YDR486C POB3Q04636 552 aaKnown RBP11.37□□□□□ -0.59
VPS60YDR486C TRE1Q08919 783 aa11.37□□□□□ -0.59
VPS60YDR486C MSD1P15179 658 aaKnown RBP11.36□□□□□ -0.59
VPS60YDR486C EST1P17214 699 aaPredicted RBP11.36□□□□□ -0.59
VPS60YDR486C GAC1P28006 793 aa11.36□□□□□ -0.59
VPS60YDR486C MRP4P32902 394 aa11.36□□□□□ -0.59
VPS60YDR486C KDX1P36005 433 aa11.36□□□□□ -0.59
VPS60YDR486C RRT2P38332 387 aa11.36□□□□□ -0.59
VPS60YDR486C QNS1P38795 714 aaKnown RBP11.36□□□□□ -0.59
VPS60YDR486C SPC72P39723 622 aa11.36□□□□□ -0.59
VPS60YDR486C ASG1P40467 964 aa11.36□□□□□ -0.59
VPS60YDR486C SPP1Q03012 353 aa11.36□□□□□ -0.59
VPS60YDR486C MUB1Q03162 620 aa11.36□□□□□ -0.59
VPS60YDR486C YOR059CQ08448 450 aaKnown RBP11.36□□□□□ -0.59
VPS60YDR486C TAO3P40468 2376 aa11.35□□□□□ -0.59
VPS60YDR486C JIP3O13555 125 aa11.35□□□□□ -0.59
VPS60YDR486C HAP2P06774 265 aa11.35□□□□□ -0.59
VPS60YDR486C YEL043WP32618 956 aa11.35□□□□□ -0.59
VPS60YDR486C YBL036CP38197 257 aa11.35□□□□□ -0.59
VPS60YDR486C SIP5P40210 489 aaKnown RBP11.35□□□□□ -0.59
VPS60YDR486C CWC22P53333 577 aaKnown RBP11.35□□□□□ -0.59
VPS60YDR486C ATG16Q03818 150 aa11.35□□□□□ -0.59
VPS60YDR486C ARO80Q04052 950 aa11.35□□□□□ -0.59
VPS60YDR486C ERV41Q04651 352 aa11.35□□□□□ -0.59
VPS60YDR486C SDH5Q08230 162 aa11.35□□□□□ -0.59
VPS60YDR486C YLR462WO13556 202 aa11.34□□□□□ -0.59
VPS60YDR486C ADE3P07245 946 aaKnown RBP11.34□□□□□ -0.59
VPS60YDR486C KAR3P17119 729 aa11.34□□□□□ -0.59
VPS60YDR486C DBF4P32325 704 aa11.34□□□□□ -0.59
VPS60YDR486C SLA2P33338 968 aa11.34□□□□□ -0.59
VPS60YDR486C APN2P38207 520 aa11.34□□□□□ -0.59
VPS60YDR486C YHL049CP38722 271 aa11.34□□□□□ -0.59
VPS60YDR486C YER189WP40104 122 aa11.34□□□□□ -0.59
VPS60YDR486C RPT2P40327 437 aaKnown RBP11.34□□□□□ -0.59
VPS60YDR486C YFL064CP43540 174 aa11.34□□□□□ -0.59
VPS60YDR486C MAL13P53338 473 aa11.34□□□□□ -0.59
VPS60YDR486C VPS54Q12071 889 aa11.34□□□□□ -0.59
VPS60YDR486C YBL111CQ3E7Y5 667 aa11.34□□□□□ -0.59
VPS60YDR486C SPT5P27692 1063 aaKnown RBP11.33□□□□□ -0.6
VPS60YDR486C ABD1P32783 436 aaPredicted RBP11.33□□□□□ -0.6
VPS60YDR486C MAC1P35192 417 aa11.33□□□□□ -0.6
VPS60YDR486C SHE3P38272 425 aaKnown RBP11.33□□□□□ -0.6
VPS60YDR486C YEL023CP39992 682 aa11.33□□□□□ -0.6
VPS60YDR486C JHD1P40034 492 aa11.33□□□□□ -0.6
VPS60YDR486C TMN3P40071 706 aa11.33□□□□□ -0.6
VPS60YDR486C LCP5P40079 357 aaPredicted RBP11.33□□□□□ -0.6
VPS60YDR486C SNZ3P43545 298 aa11.33□□□□□ -0.6
VPS60YDR486C SNZ2P53824 298 aa11.33□□□□□ -0.6
VPS60YDR486C PNG1Q02890 363 aa11.33□□□□□ -0.6
VPS60YDR486C PUF3Q07807 879 aaKnown RBP RIP-Chip data11.33□□□□□ -0.6not detected
VPS60YDR486C DIS3Q08162 1001 aaKnown RBP11.33□□□□□ -0.6
VPS60YDR486C EMP46Q12396 444 aa11.33□□□□□ -0.6
VPS60YDR486C NOP14Q99207 810 aaKnown RBP11.33□□□□□ -0.6
VPS60YDR486C SEG2P34250 1132 aa11.32□□□□□ -0.6
VPS60YDR486C BYE1P36106 594 aa11.32□□□□□ -0.6
VPS60YDR486C ABZ1P37254 787 aaPredicted RBP11.32□□□□□ -0.6
VPS60YDR486C RSC8P43609 557 aaKnown RBP11.32□□□□□ -0.6
VPS60YDR486C YNL011CP53980 444 aa11.32□□□□□ -0.6
VPS60YDR486C SLG1P54867 378 aa11.32□□□□□ -0.6
VPS60YDR486C RRB1Q04225 511 aaKnown RBP11.32□□□□□ -0.6
VPS60YDR486C EMI2Q04409 500 aaKnown RBP11.32□□□□□ -0.6
VPS60YDR486C SFI1Q12369 946 aa11.32□□□□□ -0.6
VPS60YDR486C SPO21Q12411 609 aa11.32□□□□□ -0.6
VPS60YDR486C PRC1P00729 532 aa11.31□□□□□ -0.6
VPS60YDR486C LRE1P25579 583 aaKnown RBP11.31□□□□□ -0.6
VPS60YDR486C YBL055CP34220 418 aaPredicted RBP11.31□□□□□ -0.6
VPS60YDR486C HMT1P38074 348 aa11.31□□□□□ -0.6
VPS60YDR486C YBR284WP38150 797 aa11.31□□□□□ -0.6
VPS60YDR486C RFS1P38234 210 aaKnown RBP11.31□□□□□ -0.6
VPS60YDR486C YFL052WP43551 465 aa11.31□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 84 ms