RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C NOP15P53927 220 aaPredicted RBP4.85□□□□□ -1.63
SHU2YDR078C DUS4Q06063 367 aa4.85□□□□□ -1.63
SHU2YDR078C YLR407WQ06070 228 aa4.85□□□□□ -1.63
SHU2YDR078C BUD21Q08492 214 aaPredicted RBP4.85□□□□□ -1.63
SHU2YDR078C GPB1Q08886 897 aa4.85□□□□□ -1.63
SHU2YDR078C TUB2P02557 457 aaKnown RBP4.84□□□□□ -1.63
SHU2YDR078C TUB3P09734 445 aaKnown RBP4.84□□□□□ -1.63
SHU2YDR078C GLN4P13188 809 aaKnown RBP4.84□□□□□ -1.63
SHU2YDR078C PRP4P20053 465 aaKnown RBP4.84□□□□□ -1.63
SHU2YDR078C SEC21P32074 935 aaKnown RBP4.84□□□□□ -1.63
SHU2YDR078C YHR202WP38887 602 aa4.84□□□□□ -1.63
SHU2YDR078C MEF2P39677 819 aa4.84□□□□□ -1.63
SHU2YDR078C GID8P40208 455 aa4.84□□□□□ -1.63
SHU2YDR078C VHR1P40522 640 aa4.84□□□□□ -1.63
SHU2YDR078C VID28P40547 921 aa4.84□□□□□ -1.63
SHU2YDR078C TAN1P53072 289 aaPredicted RBP4.84□□□□□ -1.63
SHU2YDR078C PAP2P53632 584 aaKnown RBP4.84□□□□□ -1.63
SHU2YDR078C CNM67P53865 581 aaKnown RBP4.84□□□□□ -1.63
SHU2YDR078C GCN5Q03330 439 aa4.84□□□□□ -1.63
SHU2YDR078C YMR210WQ03649 449 aa4.84□□□□□ -1.63
SHU2YDR078C RXT3Q07458 294 aa4.84□□□□□ -1.63
SHU2YDR078C NOP12Q08208 459 aaKnown RBP4.84□□□□□ -1.63
SHU2YDR078C SWM1Q12379 170 aa4.84□□□□□ -1.63
SHU2YDR078C YLR415CO13578 112 aa4.83□□□□□ -1.64
SHU2YDR078C CDC26P14724 124 aa4.83□□□□□ -1.64
SHU2YDR078C PRE10P21242 288 aaKnown RBP RIP-Chip data4.83□□□□□ -1.64not detected
SHU2YDR078C IMG2P25642 146 aaPredicted RBP4.83□□□□□ -1.64
SHU2YDR078C NGG1P32494 702 aa4.83□□□□□ -1.64
SHU2YDR078C SIC1P38634 284 aa4.83□□□□□ -1.64
SHU2YDR078C IES1P43579 692 aa4.83□□□□□ -1.64
SHU2YDR078C YBP2P53169 641 aa4.83□□□□□ -1.64
SHU2YDR078C HOL1P53389 586 aa4.83□□□□□ -1.64
SHU2YDR078C VPS72Q03388 795 aa4.83□□□□□ -1.64
SHU2YDR078C PKH1Q03407 766 aa4.83□□□□□ -1.64
SHU2YDR078C YDR132CQ03900 495 aa4.83□□□□□ -1.64
SHU2YDR078C ECM16Q04217 1267 aaKnown RBP4.83□□□□□ -1.64
SHU2YDR078C NPC2Q12408 173 aa4.83□□□□□ -1.64
SHU2YDR078C YLR358CO13565 187 aa4.82□□□□□ -1.64
SHU2YDR078C RPS17AP02407 136 aaKnown RBP4.82□□□□□ -1.64
SHU2YDR078C RPS17BP14127 136 aaKnown RBP4.82□□□□□ -1.64
SHU2YDR078C PFK1P16861 987 aaKnown RBP4.82□□□□□ -1.64
SHU2YDR078C YHL041WP38730 149 aa4.82□□□□□ -1.64
SHU2YDR078C MSS4P38994 779 aa4.82□□□□□ -1.64
SHU2YDR078C HIS6P40545 261 aa4.82□□□□□ -1.64
SHU2YDR078C PRP31P49704 494 aaPredicted RBP4.82□□□□□ -1.64
SHU2YDR078C YAP6Q03935 383 aa4.82□□□□□ -1.64
SHU2YDR078C PNS1Q12412 539 aa4.82□□□□□ -1.64
SHU2YDR078C PYC1P11154 1178 aaKnown RBP4.81□□□□□ -1.64
SHU2YDR078C ADE2P21264 571 aaKnown RBP4.81□□□□□ -1.64
SHU2YDR078C HXT4P32467 576 aa4.81□□□□□ -1.64
SHU2YDR078C APL2P36000 726 aaPredicted RBP4.81□□□□□ -1.64
SHU2YDR078C YBR259WP38338 688 aa4.81□□□□□ -1.64
SHU2YDR078C SRP68P38687 599 aaKnown RBP4.81□□□□□ -1.64
SHU2YDR078C ECM1P39715 212 aa4.81□□□□□ -1.64
SHU2YDR078C ARG5,6Q01217 863 aa4.81□□□□□ -1.64
SHU2YDR078C YPS7Q06325 596 aa4.81□□□□□ -1.64
SHU2YDR078C MCM21Q06675 368 aa4.81□□□□□ -1.64
SHU2YDR078C ACK1Q07622 623 aaPredicted RBP4.81□□□□□ -1.64
SHU2YDR078C NGL1Q08213 363 aaKnown RBP4.81□□□□□ -1.64
SHU2YDR078C MSS18P08593 268 aa4.8□□□□□ -1.64
SHU2YDR078C ACO1P19414 778 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
SHU2YDR078C HOP1P20050 605 aa4.8□□□□□ -1.64
SHU2YDR078C CDC20P26309 610 aa4.8□□□□□ -1.64
SHU2YDR078C MF(ALPHA)2P32435 120 aa4.8□□□□□ -1.64
SHU2YDR078C PET127P32606 800 aa4.8□□□□□ -1.64
SHU2YDR078C MRS6P32864 603 aaKnown RBP4.8□□□□□ -1.64
SHU2YDR078C PTH2P34222 208 aa4.8□□□□□ -1.64
SHU2YDR078C KTR4P38131 464 aa4.8□□□□□ -1.64
SHU2YDR078C DUN1P39009 513 aa4.8□□□□□ -1.64
SHU2YDR078C IRC5P43610 853 aa4.8□□□□□ -1.64
SHU2YDR078C ENP2P48234 707 aaKnown RBP4.8□□□□□ -1.64
SHU2YDR078C EXG2P52911 562 aa4.8□□□□□ -1.64
SHU2YDR078C CEG1Q01159 459 aaPredicted RBP4.8□□□□□ -1.64
SHU2YDR078C SLU7Q02775 382 aaKnown RBP4.8□□□□□ -1.64
SHU2YDR078C OMS1Q06668 471 aa4.8□□□□□ -1.64
SHU2YDR078C PEX19Q07418 342 aa4.8□□□□□ -1.64
SHU2YDR078C ISA1Q07821 250 aaPredicted RBP4.8□□□□□ -1.64
SHU2YDR078C CWC2Q12046 339 aaPredicted RBP4.8□□□□□ -1.64
SHU2YDR078C KCS1Q12494 1050 aa4.8□□□□□ -1.64
SHU2YDR078C NAB3P38996 802 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
SHU2YDR078C EAF5P39995 279 aa4.79□□□□□ -1.64
SHU2YDR078C YIL092WP40497 633 aa4.79□□□□□ -1.64
SHU2YDR078C QRI7P43122 407 aa4.79□□□□□ -1.64
SHU2YDR078C PUS4P48567 403 aaKnown RBP4.79□□□□□ -1.64
SHU2YDR078C MTD1Q02046 320 aaKnown RBP4.79□□□□□ -1.64
SHU2YDR078C REC102Q02721 264 aa4.79□□□□□ -1.64
SHU2YDR078C HMO1Q03973 246 aaKnown RBP4.79□□□□□ -1.64
SHU2YDR078C STP4Q07351 490 aa4.79□□□□□ -1.64
SHU2YDR078C NUR1Q12066 484 aa4.79□□□□□ -1.64
SHU2YDR078C YOL114CQ12322 202 aa4.79□□□□□ -1.64
SHU2YDR078C TRM11Q12463 433 aa4.79□□□□□ -1.64
SHU2YDR078C APA1P16550 321 aaKnown RBP4.78□□□□□ -1.64
SHU2YDR078C IME1P21190 360 aa4.78□□□□□ -1.64
SHU2YDR078C PHO3P24031 467 aa4.78□□□□□ -1.64
SHU2YDR078C DGR2P32330 852 aa4.78□□□□□ -1.64
SHU2YDR078C CTF13P35203 478 aa4.78□□□□□ -1.64
SHU2YDR078C YPT53P36019 220 aa4.78□□□□□ -1.64
SHU2YDR078C APT2P36973 181 aa4.78□□□□□ -1.64
SHU2YDR078C YHR112CP38716 378 aa4.78□□□□□ -1.64
SHU2YDR078C RPP1P38786 293 aa4.78□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 75.7 ms