RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	PAH1	P32567	862 aa		6.38	□□□□□ -1.39
SNF11	YDR073W	SWI3	P32591	825 aa		6.38	□□□□□ -1.39
SNF11	YDR073W	MUD2	P36084	527 aa	Known RBP	6.38	□□□□□ -1.39
SNF11	YDR073W	BEM4	P39011	633 aa		6.38	□□□□□ -1.39
SNF11	YDR073W	SWD1	P39706	426 aa		6.38	□□□□□ -1.39
SNF11	YDR073W	PUS4	P48567	403 aa	Known RBP	6.38	□□□□□ -1.39
SNF11	YDR073W	SAP4	P53036	818 aa		6.38	□□□□□ -1.39
SNF11	YDR073W	BRE5	P53741	515 aa	Known RBP	6.38	□□□□□ -1.39
SNF11	YDR073W	VAS1	P07806	1104 aa	Known RBP	6.37	□□□□□ -1.39
SNF11	YDR073W	YEL076C-A	P0CX16	216 aa		6.37	□□□□□ -1.39
SNF11	YDR073W	YLR464W	P0CX17	216 aa		6.37	□□□□□ -1.39
SNF11	YDR073W	ADH4	P10127	382 aa		6.37	□□□□□ -1.39
SNF11	YDR073W	SAM35	P14693	329 aa		6.37	□□□□□ -1.39
SNF11	YDR073W	CBP3	P21560	335 aa		6.37	□□□□□ -1.39
SNF11	YDR073W	YCL049C	P25577	312 aa		6.37	□□□□□ -1.39
SNF11	YDR073W	SRP101	P32916	621 aa		6.37	□□□□□ -1.39
SNF11	YDR073W	LAM1	P38851	1228 aa		6.37	□□□□□ -1.39
SNF11	YDR073W	SSP120	P39931	234 aa	Known RBP	6.37	□□□□□ -1.39
SNF11	YDR073W	YEL076C	P39971	216 aa		6.37	□□□□□ -1.39
SNF11	YDR073W	YEL068C	P39977	110 aa		6.37	□□□□□ -1.39
SNF11	YDR073W	NOP16	P40007	231 aa	Known RBP	6.37	□□□□□ -1.39
SNF11	YDR073W	PSF2	P40359	213 aa		6.37	□□□□□ -1.39
SNF11	YDR073W	CCT8	P47079	568 aa	Known RBP	6.37	□□□□□ -1.39
SNF11	YDR073W	SXM1	Q04175	944 aa	Known RBP	6.37	□□□□□ -1.39
SNF11	YDR073W	GRC3	Q07845	632 aa		6.37	□□□□□ -1.39
SNF11	YDR073W	SPS1	P08458	490 aa		6.36	□□□□□ -1.39
SNF11	YDR073W	MTF2	P10849	440 aa		6.36	□□□□□ -1.39
SNF11	YDR073W	AAC3	P18238	307 aa		6.36	□□□□□ -1.39
SNF11	YDR073W	NUP120	P35729	1037 aa		6.36	□□□□□ -1.39
SNF11	YDR073W	RFC5	P38251	354 aa		6.36	□□□□□ -1.39
SNF11	YDR073W	MIP6	P38760	659 aa	Known RBP	6.36	□□□□□ -1.39
SNF11	YDR073W	UME6	P39001	836 aa		6.36	□□□□□ -1.39
SNF11	YDR073W	SGM1	P47166	707 aa		6.36	□□□□□ -1.39
SNF11	YDR073W	CPR6	P53691	371 aa	Known RBP	6.36	□□□□□ -1.39
SNF11	YDR073W	ORC4	P54791	529 aa		6.36	□□□□□ -1.39
SNF11	YDR073W	GSF2	Q04697	403 aa	Known RBP	6.36	□□□□□ -1.39
SNF11	YDR073W	LEU2	P04173	364 aa	Predicted RBP	6.35	□□□□□ -1.39
SNF11	YDR073W	MIS1	P09440	975 aa	Known RBP	6.35	□□□□□ -1.39
SNF11	YDR073W	HSF1	P10961	833 aa		6.35	□□□□□ -1.39
SNF11	YDR073W	APL1	P27351	700 aa		6.35	□□□□□ -1.39
SNF11	YDR073W	LRG1	P35688	1017 aa		6.35	□□□□□ -1.39
SNF11	YDR073W	MRPL36	P36531	177 aa		6.35	□□□□□ -1.39
SNF11	YDR073W	AKL1	P38080	1108 aa	Known RBP	6.35	□□□□□ -1.39
SNF11	YDR073W	UBS1	P38290	277 aa		6.35	□□□□□ -1.39
SNF11	YDR073W	BCD1	P38772	366 aa		6.35	□□□□□ -1.39
SNF11	YDR073W	PUG1	P40100	303 aa		6.35	□□□□□ -1.39
SNF11	YDR073W	SET2	P46995	733 aa	Known RBP	6.35	□□□□□ -1.39
SNF11	YDR073W	RBG2	P53295	368 aa	Known RBP	6.35	□□□□□ -1.39
SNF11	YDR073W	SSL1	Q04673	461 aa	Predicted RBP	6.35	□□□□□ -1.39
SNF11	YDR073W	VID22	Q05934	901 aa		6.35	□□□□□ -1.39
SNF11	YDR073W	YVC1	Q12324	675 aa		6.35	□□□□□ -1.39
SNF11	YDR073W	SNF1	P06782	633 aa	Known RBP	6.34	□□□□□ -1.39
SNF11	YDR073W	KIN2	P13186	1147 aa	Known RBP	6.34	□□□□□ -1.39
SNF11	YDR073W	NCP1	P16603	691 aa	Known RBP	6.34	□□□□□ -1.39
SNF11	YDR073W	UBC1	P21734	215 aa	Known RBP	6.34	□□□□□ -1.39
SNF11	YDR073W	ADP1	P25371	1049 aa		6.34	□□□□□ -1.39
SNF11	YDR073W	PGS1	P25578	521 aa		6.34	□□□□□ -1.39
SNF11	YDR073W	IMG2	P25642	146 aa	Predicted RBP	6.34	□□□□□ -1.39
SNF11	YDR073W	APN2	P38207	520 aa		6.34	□□□□□ -1.39
SNF11	YDR073W	AXL2	P38928	823 aa		6.34	□□□□□ -1.39
SNF11	YDR073W	VHR1	P40522	640 aa		6.34	□□□□□ -1.39
SNF11	YDR073W	IMA5	P40884	581 aa		6.34	□□□□□ -1.39
SNF11	YDR073W	SSY5	P47002	699 aa		6.34	□□□□□ -1.39
SNF11	YDR073W	MTR3	P48240	250 aa	Predicted RBP	6.34	□□□□□ -1.39
SNF11	YDR073W	EXG2	P52911	562 aa		6.34	□□□□□ -1.39
SNF11	YDR073W	CBK1	P53894	756 aa		6.34	□□□□□ -1.39
SNF11	YDR073W	LEE1	Q02799	301 aa	Known RBP	6.34	□□□□□ -1.39
SNF11	YDR073W	IMH1	Q06704	911 aa	Known RBP	6.34	□□□□□ -1.39
SNF11	YDR073W	CMP2	P14747	604 aa		6.33	□□□□□ -1.4
SNF11	YDR073W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	6.33	□□□□□ -1.4	not detected
SNF11	YDR073W	FUR1	P18562	216 aa	Known RBP	6.33	□□□□□ -1.4
SNF11	YDR073W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	6.33	□□□□□ -1.4	not detected
SNF11	YDR073W	MCM3	P24279	971 aa	Known RBP	6.33	□□□□□ -1.4
SNF11	YDR073W	CLB4	P24871	460 aa		6.33	□□□□□ -1.4
SNF11	YDR073W	MF(ALPHA)2	P32435	120 aa		6.33	□□□□□ -1.4
SNF11	YDR073W	AIM26	P32858	118 aa		6.33	□□□□□ -1.4
SNF11	YDR073W	PXA2	P34230	853 aa		6.33	□□□□□ -1.4
SNF11	YDR073W	PEX5	P35056	612 aa		6.33	□□□□□ -1.4
SNF11	YDR073W	YKL050C	P35736	922 aa		6.33	□□□□□ -1.4
SNF11	YDR073W	DPH1	P40487	425 aa	Known RBP	6.33	□□□□□ -1.4
SNF11	YDR073W	MMM1	P41800	426 aa		6.33	□□□□□ -1.4
SNF11	YDR073W	UPF3	P48412	387 aa	Known RBP	6.33	□□□□□ -1.4
SNF11	YDR073W	PSP2	P50109	593 aa	Known RBP	6.33	□□□□□ -1.4
SNF11	YDR073W	YGR012W	P53206	393 aa		6.33	□□□□□ -1.4
SNF11	YDR073W	RSC1	P53236	928 aa		6.33	□□□□□ -1.4
SNF11	YDR073W	TIM50	Q02776	476 aa		6.33	□□□□□ -1.4
SNF11	YDR073W	CSR1	Q06705	408 aa	Known RBP	6.33	□□□□□ -1.4
SNF11	YDR073W	BRE4	Q07660	1125 aa		6.33	□□□□□ -1.4
SNF11	YDR073W	TAH18	Q12181	623 aa		6.33	□□□□□ -1.4
SNF11	YDR073W	POL3	P15436	1097 aa		6.32	□□□□□ -1.4
SNF11	YDR073W	GUK1	P15454	187 aa	Known RBP	6.32	□□□□□ -1.4
SNF11	YDR073W	RSC6	P25632	483 aa		6.32	□□□□□ -1.4
SNF11	YDR073W	CMK1	P27466	446 aa	Known RBP	6.32	□□□□□ -1.4
SNF11	YDR073W	RAD16	P31244	790 aa		6.32	□□□□□ -1.4
SNF11	YDR073W	STT3	P39007	718 aa	Known RBP	6.32	□□□□□ -1.4
SNF11	YDR073W	YLR287C	Q05881	355 aa		6.32	□□□□□ -1.4
SNF11	YDR073W	YPS7	Q06325	596 aa		6.32	□□□□□ -1.4
SNF11	YDR073W	YLR352W	Q06479	807 aa		6.32	□□□□□ -1.4
SNF11	YDR073W	YCG1	Q06680	1035 aa		6.32	□□□□□ -1.4
SNF11	YDR073W	RTK1	Q12100	620 aa	Predicted RBP	6.32	□□□□□ -1.4

Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms