RNA–Protein interactions for RNA: YCL069W

VBA3, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA3, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA3YCL069W TY1A-NL2Q12470 440 aa8.86□□□□□ -0.99
VBA3YCL069W TY1A-GR2Q12485 440 aa8.86□□□□□ -0.99
VBA3YCL069W YLR422WQ06409 1932 aa8.86□□□□□ -0.99
VBA3YCL069W GAL10P04397 699 aa8.86□□□□□ -0.99
VBA3YCL069W MSD1P15179 658 aaKnown RBP8.86□□□□□ -0.99
VBA3YCL069W SCJ1P25303 377 aa8.86□□□□□ -0.99
VBA3YCL069W CSG2P35206 410 aa8.86□□□□□ -0.99
VBA3YCL069W EBP2P36049 427 aaKnown RBP8.86□□□□□ -0.99
VBA3YCL069W AGP2P38090 596 aa8.86□□□□□ -0.99
VBA3YCL069W MSC7P38694 644 aa8.86□□□□□ -0.99
VBA3YCL069W SMC2P38989 1170 aaKnown RBP8.86□□□□□ -0.99
VBA3YCL069W SAH1P39954 449 aaKnown RBP8.86□□□□□ -0.99
VBA3YCL069W KAP123P40069 1113 aaKnown RBP8.86□□□□□ -0.99
VBA3YCL069W SHQ1P40486 507 aaPredicted RBP8.86□□□□□ -0.99
VBA3YCL069W RSC8P43609 557 aaKnown RBP8.86□□□□□ -0.99
VBA3YCL069W ZAP1P47043 880 aa8.86□□□□□ -0.99
VBA3YCL069W DRN1P53255 507 aaKnown RBP8.86□□□□□ -0.99
VBA3YCL069W ESBP6P53918 673 aa8.86□□□□□ -0.99
VBA3YCL069W AHC1Q12433 566 aa8.86□□□□□ -0.99
VBA3YCL069W ECM3Q99252 613 aa8.86□□□□□ -0.99
VBA3YCL069W AI5_BETAQ9ZZX0 354 aa8.86□□□□□ -0.99
VBA3YCL069W TRP2P00899 507 aaKnown RBP8.85□□□□□ -0.99
VBA3YCL069W CDC33P07260 213 aaKnown RBP8.85□□□□□ -0.99
VBA3YCL069W COX11P19516 300 aaKnown RBP8.85□□□□□ -0.99
VBA3YCL069W SPT16P32558 1035 aaKnown RBP8.85□□□□□ -0.99
VBA3YCL069W TRZ1P36159 838 aaPredicted RBP8.85□□□□□ -0.99
VBA3YCL069W MRPL7P36519 292 aa8.85□□□□□ -0.99
VBA3YCL069W TBS1P38114 1094 aa8.85□□□□□ -0.99
VBA3YCL069W APN2P38207 520 aa8.85□□□□□ -0.99
VBA3YCL069W BUD16P39988 312 aa8.85□□□□□ -0.99
VBA3YCL069W NUP42P49686 430 aaKnown RBP8.85□□□□□ -0.99
VBA3YCL069W RCR2Q03446 210 aaKnown RBP8.85□□□□□ -0.99
VBA3YCL069W YCG1Q06680 1035 aa8.85□□□□□ -0.99
VBA3YCL069W YPR027CQ12079 277 aa8.85□□□□□ -0.99
VBA3YCL069W PRC1P00729 532 aa8.84□□□□□ -0.99
VBA3YCL069W CHS1P08004 1131 aa8.84□□□□□ -0.99
VBA3YCL069W RNR1P21524 888 aaKnown RBP8.84□□□□□ -0.99
VBA3YCL069W CYS3P31373 394 aaKnown RBP8.84□□□□□ -0.99
VBA3YCL069W EFB1P32471 206 aaKnown RBP8.84□□□□□ -0.99
VBA3YCL069W PEX2P32800 271 aa8.84□□□□□ -0.99
VBA3YCL069W CCL1P37366 393 aa8.84□□□□□ -0.99
VBA3YCL069W EXO5P38289 585 aa8.84□□□□□ -0.99
VBA3YCL069W YHR202WP38887 602 aa8.84□□□□□ -0.99
VBA3YCL069W YGR130CP53278 816 aa8.84□□□□□ -0.99
VBA3YCL069W ERG5P54781 538 aa8.84□□□□□ -0.99
VBA3YCL069W STP1Q00947 519 aa8.84□□□□□ -0.99
VBA3YCL069W NEW1Q08972 1196 aaKnown RBP8.84□□□□□ -0.99
VBA3YCL069W MTF2P10849 440 aa8.83□□□□□ -1
VBA3YCL069W BIO2P32451 375 aa8.83□□□□□ -1
VBA3YCL069W GCS1P35197 352 aa8.83□□□□□ -1
VBA3YCL069W RFS1P38234 210 aaKnown RBP8.83□□□□□ -1
VBA3YCL069W FMP10P40098 244 aa8.83□□□□□ -1
VBA3YCL069W POL31P46957 487 aa8.83□□□□□ -1
VBA3YCL069W MCM6P53091 1017 aaKnown RBP8.83□□□□□ -1
VBA3YCL069W SPC98P53540 846 aa8.83□□□□□ -1
VBA3YCL069W VPS38Q05919 439 aa8.83□□□□□ -1
VBA3YCL069W YOL098CQ12496 1037 aa8.83□□□□□ -1
VBA3YCL069W VPS3P23643 1011 aa8.82□□□□□ -1
VBA3YCL069W SEC21P32074 935 aaKnown RBP8.82□□□□□ -1
VBA3YCL069W DYS1P38791 387 aa8.82□□□□□ -1
VBA3YCL069W YMR124WP39523 943 aaKnown RBP8.82□□□□□ -1
VBA3YCL069W GEM1P39722 662 aa8.82□□□□□ -1
VBA3YCL069W SIP5P40210 489 aaKnown RBP8.82□□□□□ -1
VBA3YCL069W HXT8P40886 569 aa8.82□□□□□ -1
VBA3YCL069W EAR1Q03212 550 aa8.82□□□□□ -1
VBA3YCL069W UTP5Q04177 643 aaKnown RBP8.82□□□□□ -1
VBA3YCL069W OPY2Q06810 360 aa8.82□□□□□ -1
VBA3YCL069W TSR1Q07381 788 aaKnown RBP8.82□□□□□ -1
VBA3YCL069W HAP2P06774 265 aa8.81□□□□□ -1
VBA3YCL069W PAT1P25644 796 aaKnown RBP8.81□□□□□ -1
VBA3YCL069W SPC110P32380 944 aa8.81□□□□□ -1
VBA3YCL069W FAF1P40546 346 aaPredicted RBP8.81□□□□□ -1
VBA3YCL069W YFL052WP43551 465 aa8.81□□□□□ -1
VBA3YCL069W NOP13P53883 403 aaKnown RBP RIP-Chip data8.81□□□□□ -1not detected
VBA3YCL069W MUB1Q03162 620 aa8.81□□□□□ -1
VBA3YCL069W TIF35Q04067 274 aaKnown RBP8.81□□□□□ -1
VBA3YCL069W GAL80P04387 435 aa8.8□□□□□ -1
VBA3YCL069W SNF1P06782 633 aaKnown RBP8.8□□□□□ -1
VBA3YCL069W KEX2P13134 814 aa8.8□□□□□ -1
VBA3YCL069W RRN6P32786 894 aa8.8□□□□□ -1
VBA3YCL069W FRE1P32791 686 aa8.8□□□□□ -1
VBA3YCL069W GYP6P32806 458 aa8.8□□□□□ -1
VBA3YCL069W YKL050CP35736 922 aa8.8□□□□□ -1
VBA3YCL069W SET5P38890 526 aaKnown RBP8.8□□□□□ -1
VBA3YCL069W PHO86P46956 311 aa8.8□□□□□ -1
VBA3YCL069W MET13P53128 600 aa8.8□□□□□ -1
VBA3YCL069W YGL036WP53185 909 aaPredicted RBP8.8□□□□□ -1
VBA3YCL069W GPD1Q00055 391 aaKnown RBP8.8□□□□□ -1
VBA3YCL069W YLR001CQ07895 862 aa8.8□□□□□ -1
VBA3YCL069W VMA4P22203 233 aaKnown RBP8.79□□□□□ -1
VBA3YCL069W RAD57P25301 460 aa8.79□□□□□ -1
VBA3YCL069W VBA3P25594 458 aa8.79□□□□□ -1
VBA3YCL069W VBA5P36172 582 aa8.79□□□□□ -1
VBA3YCL069W CBR1P38626 284 aaKnown RBP8.79□□□□□ -1
VBA3YCL069W PCM1P38628 557 aaKnown RBP8.79□□□□□ -1
VBA3YCL069W SEC9P40357 651 aa8.79□□□□□ -1
VBA3YCL069W RRN7P40992 514 aa8.79□□□□□ -1
VBA3YCL069W ASG7P46993 209 aa8.79□□□□□ -1
VBA3YCL069W YJR054WP47114 497 aa8.79□□□□□ -1
VBA3YCL069W INP52P50942 1183 aa8.79□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms