RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeastyeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPK3YBR028C YPS7Q06325 596 aa5.75□□□□□ -1.49
YPK3YBR028C ISA1Q07821 250 aaPredicted RBP5.75□□□□□ -1.49
YPK3YBR028C TMA7Q3E764 64 aaKnown RBP5.75□□□□□ -1.49
YPK3YBR028C TRP4P07285 380 aaPredicted RBP5.74□□□□□ -1.49
YPK3YBR028C YNL195CP40168 261 aa5.74□□□□□ -1.49
YPK3YBR028C MPD2Q99316 277 aa5.74□□□□□ -1.49
YPK3YBR028C PMA1P05030 918 aaKnown RBP5.73□□□□□ -1.49
YPK3YBR028C CDC26P14724 124 aa5.73□□□□□ -1.49
YPK3YBR028C PFK1P16861 987 aaKnown RBP5.73□□□□□ -1.49
YPK3YBR028C COX11P19516 300 aaKnown RBP5.73□□□□□ -1.49
YPK3YBR028C MPT5P39016 859 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49 RIP-Chip
YPK3YBR028C REC102Q02721 264 aa5.73□□□□□ -1.49
YPK3YBR028C RCR2Q03446 210 aaKnown RBP5.73□□□□□ -1.49
YPK3YBR028C YMR210WQ03649 449 aa5.73□□□□□ -1.49
YPK3YBR028C TRM13Q12383 476 aa5.73□□□□□ -1.49
YPK3YBR028C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
YPK3YBR028C HRP1Q99383 534 aaKnown RBP5.73□□□□□ -1.49
YPK3YBR028C RPS17AP02407 136 aaKnown RBP5.72□□□□□ -1.49
YPK3YBR028C RPS17BP14127 136 aaKnown RBP5.72□□□□□ -1.49
YPK3YBR028C IME1P21190 360 aa5.72□□□□□ -1.49
YPK3YBR028C VID28P40547 921 aa5.72□□□□□ -1.49
YPK3YBR028C IES1P43579 692 aa5.72□□□□□ -1.49
YPK3YBR028C PHO23P50947 330 aa5.72□□□□□ -1.49
YPK3YBR028C SPC105P53148 917 aa5.72□□□□□ -1.49
YPK3YBR028C GAD1Q04792 585 aa5.72□□□□□ -1.49
YPK3YBR028C PHM6Q05637 104 aa5.72□□□□□ -1.49
YPK3YBR028C ECM38Q05902 660 aaPredicted RBP5.72□□□□□ -1.49
YPK3YBR028C RNR1P21524 888 aaKnown RBP5.72□□□□□ -1.49
YPK3YBR028C CTS1P29029 562 aa5.72□□□□□ -1.49
YPK3YBR028C APT2P36973 181 aa5.72□□□□□ -1.49
YPK3YBR028C LYS9P38999 446 aa5.72□□□□□ -1.49
YPK3YBR028C PEA2P40091 420 aa5.72□□□□□ -1.49
YPK3YBR028C VPS36Q06696 566 aa5.72□□□□□ -1.49
YPK3YBR028C STP4Q07351 490 aa5.72□□□□□ -1.49
YPK3YBR028C VHS3Q08438 674 aa5.72□□□□□ -1.49
YPK3YBR028C SLX4Q12098 748 aa5.72□□□□□ -1.49
YPK3YBR028C KAR1P11927 433 aa5.71□□□□□ -1.5
YPK3YBR028C YPT7P32939 208 aa5.71□□□□□ -1.5
YPK3YBR028C TRZ1P36159 838 aaPredicted RBP5.71□□□□□ -1.5
YPK3YBR028C YBR053CP38235 358 aa5.71□□□□□ -1.5
YPK3YBR028C UBP5P39944 805 aa5.71□□□□□ -1.5
YPK3YBR028C GET2P40056 285 aa5.71□□□□□ -1.5
YPK3YBR028C NOP9P47077 666 aaKnown RBP5.71□□□□□ -1.5
YPK3YBR028C RNR4P49723 345 aaKnown RBP5.71□□□□□ -1.5
YPK3YBR028C MUP1P50276 574 aa5.71□□□□□ -1.5
YPK3YBR028C SLD3P53135 668 aa5.71□□□□□ -1.5
YPK3YBR028C MTL1P53214 551 aa5.71□□□□□ -1.5
YPK3YBR028C RTS3P53289 263 aa5.71□□□□□ -1.5
YPK3YBR028C RGC1Q06108 1083 aaKnown RBP5.71□□□□□ -1.5
YPK3YBR028C YOR378WQ08902 515 aa5.71□□□□□ -1.5
YPK3YBR028C FRS1P15624 595 aaKnown RBP5.7□□□□□ -1.5
YPK3YBR028C HCA4P20448 770 aaKnown RBP5.7□□□□□ -1.5
YPK3YBR028C PET127P32606 800 aa5.7□□□□□ -1.5
YPK3YBR028C SEC6P32844 805 aa5.7□□□□□ -1.5
YPK3YBR028C HOS4P40480 1083 aa5.7□□□□□ -1.5
YPK3YBR028C PEX15Q08215 383 aa5.7□□□□□ -1.5
YPK3YBR028C ECM3Q99252 613 aa5.7□□□□□ -1.5
YPK3YBR028C LAT1P12695 482 aaKnown RBP5.69□□□□□ -1.5
YPK3YBR028C HXT4P32467 576 aa5.69□□□□□ -1.5
YPK3YBR028C TPM2P40414 161 aa5.69□□□□□ -1.5
YPK3YBR028C BAP3P41815 604 aa5.69□□□□□ -1.5
YPK3YBR028C COX18P53239 316 aa5.69□□□□□ -1.5
YPK3YBR028C SGO1Q08490 590 aa5.69□□□□□ -1.5
YPK3YBR028C ATG11Q12527 1178 aa5.69□□□□□ -1.5
YPK3YBR028C HCM1P25364 564 aa5.68□□□□□ -1.5
YPK3YBR028C SHM2P37291 469 aaKnown RBP5.68□□□□□ -1.5
YPK3YBR028C DUN1P39009 513 aa5.68□□□□□ -1.5
YPK3YBR028C EMP65P40085 556 aa5.68□□□□□ -1.5
YPK3YBR028C ELO3P40319 345 aa5.68□□□□□ -1.5
YPK3YBR028C YIR042CP40586 236 aa5.68□□□□□ -1.5
YPK3YBR028C DLT1Q04216 342 aa5.68□□□□□ -1.5
YPK3YBR028C MET3P08536 511 aa5.67□□□□□ -1.5
YPK3YBR028C SST2P11972 698 aaKnown RBP5.67□□□□□ -1.5
YPK3YBR028C MF(ALPHA)2P32435 120 aa5.67□□□□□ -1.5
YPK3YBR028C BUD8P41698 603 aa5.67□□□□□ -1.5
YPK3YBR028C RSC8P43609 557 aaKnown RBP5.67□□□□□ -1.5
YPK3YBR028C AMA1P50082 593 aa5.67□□□□□ -1.5
YPK3YBR028C NGL1Q08213 363 aaKnown RBP5.67□□□□□ -1.5
YPK3YBR028C NTO1Q12311 748 aa5.67□□□□□ -1.5
YPK3YBR028C CAF20P12962 161 aaKnown RBP5.67□□□□□ -1.5
YPK3YBR028C EFT1P32324 842 aaKnown RBP5.67□□□□□ -1.5
YPK3YBR028C HIR1P32479 840 aa5.67□□□□□ -1.5
YPK3YBR028C FMO1P38866 432 aa5.67□□□□□ -1.5
YPK3YBR028C NOP2P40991 618 aaKnown RBP5.67□□□□□ -1.5
YPK3YBR028C TAF1P46677 1066 aa5.67□□□□□ -1.5
YPK3YBR028C CTK1Q03957 528 aaKnown RBP5.67□□□□□ -1.5
YPK3YBR028C ATP4P05626 244 aa5.66□□□□□ -1.5
YPK3YBR028C ACO1P19414 778 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
YPK3YBR028C DEF1P35732 738 aaKnown RBP5.66□□□□□ -1.5
YPK3YBR028C EAF5P39995 279 aa5.66□□□□□ -1.5
YPK3YBR028C BIT61P47041 543 aa5.66□□□□□ -1.5
YPK3YBR028C ESC8Q08119 714 aa5.66□□□□□ -1.5
YPK3YBR028C ERG20P08524 352 aaKnown RBP5.65□□□□□ -1.5
YPK3YBR028C PEX1P24004 1043 aa5.65□□□□□ -1.5
YPK3YBR028C ERG4P25340 473 aa5.65□□□□□ -1.5
YPK3YBR028C HRR25P29295 494 aaKnown RBP5.65□□□□□ -1.5
YPK3YBR028C NIC96P34077 839 aa5.65□□□□□ -1.5
YPK3YBR028C IRC5P43610 853 aa5.65□□□□□ -1.5
YPK3YBR028C DAS1P47005 663 aa5.65□□□□□ -1.5
YPK3YBR028C MET14Q02196 202 aa5.65□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms