RNA–Protein interactions for RNA: ENST00000642088.1

CASC19-278, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 2,091 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-278ENST00000642088 HIF1AQ16665 826 aa6.1□□□□□ -1.43
CASC19-278ENST00000642088 EPS8L3Q8TE67 593 aaKnown RBP6.1□□□□□ -1.43
CASC19-278ENST00000642088 HIRIP3Q9BW71 556 aaPredicted RBP6.1□□□□□ -1.43
CASC19-278ENST00000642088 ATXN7L1Q9ULK2 861 aaPredicted RBP6.1□□□□□ -1.43
CASC19-278ENST00000642088 GPATCH8Q9UKJ3 1502 aaKnown RBP6.1□□□□□ -1.43
CASC19-278ENST00000642088 ABCC10Q5T3U5 1492 aa6.1□□□□□ -1.43
CASC19-278ENST00000642088 ZBTB42B2RXF5 422 aa6.1□□□□□ -1.43
CASC19-278ENST00000642088 EGFRP00533 1210 aa6.1□□□□□ -1.43
CASC19-278ENST00000642088 MLLT1Q03111 559 aaPredicted RBP6.1□□□□□ -1.43
CASC19-278ENST00000642088 LBRQ14739 615 aaKnown RBP6.1□□□□□ -1.43
CASC19-278ENST00000642088 FIGNL1Q6PIW4 674 aa6.1□□□□□ -1.43
CASC19-278ENST00000642088 ZSCAN29Q8IWY8 852 aaPredicted RBP6.1□□□□□ -1.43
CASC19-278ENST00000642088 ALKBH8Q96BT7 664 aaKnown RBP6.1□□□□□ -1.43
CASC19-278ENST00000642088 SV2AQ7L0J3 742 aa6.09□□□□□ -1.43
CASC19-278ENST00000642088 ZCCHC11Q5TAX3 1644 aaKnown RBP6.09□□□□□ -1.43
CASC19-278ENST00000642088 UHRF1BP1LA0JNW5 1464 aa6.09□□□□□ -1.44
CASC19-278ENST00000642088 ABCC5O15440 1437 aa6.09□□□□□ -1.44
CASC19-278ENST00000642088 RBM47A0AV96 593 aaKnown RBP6.08□□□□□ -1.44
CASC19-278ENST00000642088 PLCB3Q01970 1234 aa6.08□□□□□ -1.44
CASC19-278ENST00000642088 CCINQ13939 588 aa6.08□□□□□ -1.44
CASC19-278ENST00000642088 ENOX2Q16206 610 aaKnown RBP6.08□□□□□ -1.44
CASC19-278ENST00000642088 C1orf229Q6ZS94 237 aaPredicted RBP6.08□□□□□ -1.44
CASC19-278ENST00000642088 DMRTB1Q96MA1 342 aa6.08□□□□□ -1.44
CASC19-278ENST00000642088 HHIPQ96QV1 700 aa6.08□□□□□ -1.44
CASC19-278ENST00000642088 CITED4Q96RK1 184 aa6.08□□□□□ -1.44
CASC19-278ENST00000642088 COL25A1Q9BXS0 654 aaPredicted RBP6.08□□□□□ -1.44
CASC19-278ENST00000642088 STK17AQ9UEE5 414 aa6.08□□□□□ -1.44
CASC19-278ENST00000642088 USP5P45974 858 aa6.08□□□□□ -1.44
CASC19-278ENST00000642088 INSM1Q01101 510 aaPredicted RBP6.08□□□□□ -1.44
CASC19-278ENST00000642088 PEAR1Q5VY43 1037 aaPredicted RBP6.08□□□□□ -1.44
CASC19-278ENST00000642088 PDE12Q6L8Q7 609 aaKnown RBP6.08□□□□□ -1.44
CASC19-278ENST00000642088 XKR5Q6UX68 686 aa6.08□□□□□ -1.44
CASC19-278ENST00000642088 HFE2Q6ZVN8 426 aa6.08□□□□□ -1.44
CASC19-278ENST00000642088 NSUN5Q96P11 429 aaKnown RBP6.08□□□□□ -1.44
CASC19-278ENST00000642088 IGFLR1Q9H665 355 aa6.08□□□□□ -1.44
CASC19-278ENST00000642088 ABI2Q9NYB9 513 aaPredicted RBP6.08□□□□□ -1.44
CASC19-278ENST00000642088 CFDP1Q9UEE9 299 aaPredicted RBP6.08□□□□□ -1.44
CASC19-278ENST00000642088 KDM6BO15054 1643 aa6.07□□□□□ -1.44
CASC19-278ENST00000642088 TONSLQ96HA7 1378 aa6.07□□□□□ -1.44
CASC19-278ENST00000642088 MAST1Q9Y2H9 1570 aa6.07□□□□□ -1.44
CASC19-278ENST00000642088 PLEKHH2Q8IVE3 1493 aa6.07□□□□□ -1.44
CASC19-278ENST00000642088 LDHBP07195 334 aaKnown RBP6.07□□□□□ -1.44
CASC19-278ENST00000642088 RARAP10276 462 aa6.07□□□□□ -1.44
CASC19-278ENST00000642088 PLAURQ03405 335 aa6.07□□□□□ -1.44
CASC19-278ENST00000642088 PDE3BQ13370 1112 aa6.07□□□□□ -1.44
CASC19-278ENST00000642088 NPM2Q86SE8 214 aaKnown RBP6.07□□□□□ -1.44
CASC19-278ENST00000642088 SYT9Q86SS6 491 aa6.07□□□□□ -1.44
CASC19-278ENST00000642088 NLRP13Q86W25 1043 aa6.07□□□□□ -1.44
CASC19-278ENST00000642088 CSRNP1Q96S65 589 aa6.07□□□□□ -1.44
CASC19-278ENST00000642088 DUSP9Q99956 384 aaKnown RBP6.07□□□□□ -1.44
CASC19-278ENST00000642088 NPHS2Q9NP85 383 aa6.07□□□□□ -1.44
CASC19-278ENST00000642088 NAGPAQ9UK23 515 aa6.07□□□□□ -1.44
CASC19-278ENST00000642088 J3QW42 95 aa6.06□□□□□ -1.44
CASC19-278ENST00000642088 EAPPQ56P03 285 aaPredicted RBP6.06□□□□□ -1.44
CASC19-278ENST00000642088 LDLRAD1Q5T700 205 aa6.06□□□□□ -1.44
CASC19-278ENST00000642088 ZFYVE28Q9HCC9 887 aa6.06□□□□□ -1.44
CASC19-278ENST00000642088 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.06□□□□□ -1.44
CASC19-278ENST00000642088 POLR1AO95602 1720 aaPredicted RBP6.06□□□□□ -1.44
CASC19-278ENST00000642088 ANKRD30AQ9BXX3 1397 aa6.06□□□□□ -1.44
CASC19-278ENST00000642088 EPB42P16452 691 aa6.06□□□□□ -1.44
CASC19-278ENST00000642088 FCHSD1Q86WN1 690 aa6.06□□□□□ -1.44
CASC19-278ENST00000642088 SAMD9LQ8IVG5 1584 aa6.06□□□□□ -1.44
CASC19-278ENST00000642088 SLC16A10Q8TF71 515 aa6.06□□□□□ -1.44
CASC19-278ENST00000642088 CNTNAP3BQ96NU0 1288 aa6.06□□□□□ -1.44
CASC19-278ENST00000642088 CNTNAP3Q9BZ76 1288 aa6.06□□□□□ -1.44
CASC19-278ENST00000642088 TTC37Q6PGP7 1564 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 PHACTR2O75167 634 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 MX2P20592 715 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 TBC1D8BQ0IIM8 1120 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.05□□□□□ -1.44
CASC19-278ENST00000642088 DHX32Q7L7V1 743 aaKnown RBP6.05□□□□□ -1.44
CASC19-278ENST00000642088 IRF7Q92985 503 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 CCDC74AQ96AQ1 378 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 OSBPL7Q9BZF2 842 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 RRP7BPQ9NSQ0 103 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 PARP2Q9UGN5 583 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 PLXNC1O60486 1568 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 ERCC6L2Q5T890 1561 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.05□□□□□ -1.44
CASC19-278ENST00000642088 ARAP3Q8WWN8 1544 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 KDM5DQ9BY66 1539 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 KDM5BQ9UGL1 1544 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 BMP4P12644 408 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 PCSK2P16519 638 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 ZNF468Q5VIY5 522 aaPredicted RBP6.05□□□□□ -1.44
CASC19-278ENST00000642088 OR13H1Q8NG92 308 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 SNX29Q8TEQ0 813 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 MRRFQ96E11 262 aaKnown RBP6.05□□□□□ -1.44
CASC19-278ENST00000642088 FAM13BQ9NYF5 915 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 SALL4Q9UJQ4 1053 aa6.05□□□□□ -1.44
CASC19-278ENST00000642088 CCDC141Q6ZP82 1450 aa6.04□□□□□ -1.44
CASC19-278ENST00000642088 ARHGAP5Q13017 1502 aa6.04□□□□□ -1.44
CASC19-278ENST00000642088 NEURL1BA8MQ27 555 aa6.04□□□□□ -1.44
CASC19-278ENST00000642088 DDX10Q13206 875 aaKnown RBP6.04□□□□□ -1.44
CASC19-278ENST00000642088 LAMC2Q13753 1193 aa6.04□□□□□ -1.44
CASC19-278ENST00000642088 FAM182BQ5T319 152 aa6.04□□□□□ -1.44
CASC19-278ENST00000642088 GMCL1Q96IK5 515 aa6.04□□□□□ -1.44
CASC19-278ENST00000642088 TRERF1Q96PN7 1200 aa6.04□□□□□ -1.44
CASC19-278ENST00000642088 MDFIQ99750 246 aa6.04□□□□□ -1.44
CASC19-278ENST00000642088 FNDC3AQ9Y2H6 1198 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms