RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 ZAP70P43403 619 aa8.09□□□□□ -1.11
AP3S1-209ENST00000640413 FAM69CQ0P6D2 419 aa8.09□□□□□ -1.11
AP3S1-209ENST00000640413 FOXD4L4Q8WXT5 416 aaPredicted RBP8.09□□□□□ -1.11
AP3S1-209ENST00000640413 KLHDC7BQ96G42 594 aa8.09□□□□□ -1.11
AP3S1-209ENST00000640413 KRTAP4-8A0A0G2JLE6 195 aa8.08□□□□□ -1.12
AP3S1-209ENST00000640413 PRR19A6NJB7 356 aa8.08□□□□□ -1.12
AP3S1-209ENST00000640413 ZBTB39O15060 712 aa8.08□□□□□ -1.12
AP3S1-209ENST00000640413 SPINK2P20155 84 aa8.08□□□□□ -1.12
AP3S1-209ENST00000640413 UVSSAQ2YD98 709 aa8.08□□□□□ -1.12
AP3S1-209ENST00000640413 RNF43Q68DV7 783 aa8.08□□□□□ -1.12
AP3S1-209ENST00000640413 FAM117BQ6P1L5 589 aa8.08□□□□□ -1.12
AP3S1-209ENST00000640413 KLHL23Q8NBE8 558 aa8.08□□□□□ -1.12
AP3S1-209ENST00000640413 STK32AQ8WU08 396 aa8.08□□□□□ -1.12
AP3S1-209ENST00000640413 MYRFLQ96LU7 910 aa8.08□□□□□ -1.12
AP3S1-209ENST00000640413 PBX4Q9BYU1 374 aa8.08□□□□□ -1.12
AP3S1-209ENST00000640413 FAM13BQ9NYF5 915 aa8.08□□□□□ -1.12
AP3S1-209ENST00000640413 FNDC3AQ9Y2H6 1198 aaKnown RBP8.08□□□□□ -1.12
AP3S1-209ENST00000640413 KIF4AO95239 1232 aa8.07□□□□□ -1.12
AP3S1-209ENST00000640413 GRIK1P39086 918 aa8.07□□□□□ -1.12
AP3S1-209ENST00000640413 NCAPG2Q86XI2 1143 aa8.07□□□□□ -1.12
AP3S1-209ENST00000640413 POP1Q99575 1024 aaKnown RBP8.07□□□□□ -1.12
AP3S1-209ENST00000640413 DBNDD2Q9BQY9 259 aa8.07□□□□□ -1.12
AP3S1-209ENST00000640413 ABI2Q9NYB9 513 aaPredicted RBP8.07□□□□□ -1.12
AP3S1-209ENST00000640413 INTS5Q6P9B9 1019 aaKnown RBP8.06□□□□□ -1.12
AP3S1-209ENST00000640413 CEP120Q8N960 986 aa8.06□□□□□ -1.12
AP3S1-209ENST00000640413 COL26A1Q96A83 441 aa8.06□□□□□ -1.12
AP3S1-209ENST00000640413 CXXC1Q9P0U4 656 aaPredicted RBP8.06□□□□□ -1.12
AP3S1-209ENST00000640413 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.06□□□□□ -1.12
AP3S1-209ENST00000640413 BMP3P12645 472 aa8.05□□□□□ -1.12
AP3S1-209ENST00000640413 PTPRAP18433 802 aa8.05□□□□□ -1.12
AP3S1-209ENST00000640413 FAM20CQ8IXL6 584 aa8.05□□□□□ -1.12
AP3S1-209ENST00000640413 SHKBP1Q8TBC3 707 aa8.05□□□□□ -1.12
AP3S1-209ENST00000640413 FAM83CQ9BQN1 747 aa8.05□□□□□ -1.12
AP3S1-209ENST00000640413 KCNF1Q9H3M0 494 aa8.05□□□□□ -1.12
AP3S1-209ENST00000640413 SEC31BQ9NQW1 1179 aa8.05□□□□□ -1.12
AP3S1-209ENST00000640413 KANSL3Q9P2N6 904 aa8.05□□□□□ -1.12
AP3S1-209ENST00000640413 RNF114Q9Y508 228 aa8.05□□□□□ -1.12
AP3S1-209ENST00000640413 SART1O43290 800 aaKnown RBP8.04□□□□□ -1.12
AP3S1-209ENST00000640413 PREPP48147 710 aa8.04□□□□□ -1.12
AP3S1-209ENST00000640413 BEND4Q6ZU67 534 aa8.04□□□□□ -1.12
AP3S1-209ENST00000640413 DTX1Q86Y01 620 aa8.04□□□□□ -1.12
AP3S1-209ENST00000640413 CLEC10AQ8IUN9 316 aa8.04□□□□□ -1.12
AP3S1-209ENST00000640413 ADAM19Q9H013 955 aa8.04□□□□□ -1.12
AP3S1-209ENST00000640413 TMEM63CQ9P1W3 806 aa8.04□□□□□ -1.12
AP3S1-209ENST00000640413 STIM2Q9P246 746 aa8.04□□□□□ -1.12
AP3S1-209ENST00000640413 FAM177BA6PVY3 158 aa8.03□□□□□ -1.12
AP3S1-209ENST00000640413 ACPPP15309 386 aa8.03□□□□□ -1.12
AP3S1-209ENST00000640413 NLRP12P59046 1061 aa8.03□□□□□ -1.12
AP3S1-209ENST00000640413 ELOAQ14241 798 aaKnown RBP8.03□□□□□ -1.12
AP3S1-209ENST00000640413 CNTN3Q9P232 1028 aa8.03□□□□□ -1.12
AP3S1-209ENST00000640413 WNT11O96014 354 aa8.02□□□□□ -1.13
AP3S1-209ENST00000640413 YBX3P16989 372 aaKnown RBP eCLIP8.02□□□□□ -1.131e-6■□□□□ 9
AP3S1-209ENST00000640413 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.02□□□□□ -1.13
AP3S1-209ENST00000640413 ZMYND15Q9H091 742 aa8.02□□□□□ -1.13
AP3S1-209ENST00000640413 ELP3Q9H9T3 547 aa8.02□□□□□ -1.13
AP3S1-209ENST00000640413 WDR64B1ANS9 1081 aa8.01□□□□□ -1.13
AP3S1-209ENST00000640413 H3BRJ5 948 aa8.01□□□□□ -1.13
AP3S1-209ENST00000640413 TRPA1O75762 1119 aa8.01□□□□□ -1.13
AP3S1-209ENST00000640413 HOXA10P31260 410 aaPredicted RBP8.01□□□□□ -1.13
AP3S1-209ENST00000640413 TMEM132AQ24JP5 1023 aa8.01□□□□□ -1.13
AP3S1-209ENST00000640413 SLC7A3Q8WY07 619 aa8.01□□□□□ -1.13
AP3S1-209ENST00000640413 NUDT16Q96DE0 195 aaKnown RBP8.01□□□□□ -1.13
AP3S1-209ENST00000640413 CABP4P57796 275 aa8□□□□□ -1.13
AP3S1-209ENST00000640413 PIP4K2BP78356 416 aa8□□□□□ -1.13
AP3S1-209ENST00000640413 HGSNATQ68CP4 663 aa8□□□□□ -1.13
AP3S1-209ENST00000640413 ANKRD34AQ69YU3 496 aa8□□□□□ -1.13
AP3S1-209ENST00000640413 ZNF438Q7Z4V0 828 aa8□□□□□ -1.13
AP3S1-209ENST00000640413 ATCAYQ86WG3 371 aa8□□□□□ -1.13
AP3S1-209ENST00000640413 ABTB2Q8N961 1025 aa8□□□□□ -1.13
AP3S1-209ENST00000640413 MFSD14AQ96MC6 490 aa8□□□□□ -1.13
AP3S1-209ENST00000640413 RUSC1Q9BVN2 902 aa8□□□□□ -1.13
AP3S1-209ENST00000640413 RNF208Q9H0X6 261 aa8□□□□□ -1.13
AP3S1-209ENST00000640413 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.99□□□□□ -1.13
AP3S1-209ENST00000640413 NFKBIEO00221 500 aa7.99□□□□□ -1.13
AP3S1-209ENST00000640413 TMEM164Q5U3C3 297 aa7.99□□□□□ -1.13
AP3S1-209ENST00000640413 PDE12Q6L8Q7 609 aaKnown RBP7.99□□□□□ -1.13
AP3S1-209ENST00000640413 HHIPQ96QV1 700 aa7.99□□□□□ -1.13
AP3S1-209ENST00000640413 OSGEPQ9NPF4 335 aa7.99□□□□□ -1.13
AP3S1-209ENST00000640413 SALL4Q9UJQ4 1053 aa7.99□□□□□ -1.13
AP3S1-209ENST00000640413 FDX2Q6P4F2 183 aa7.98□□□□□ -1.13
AP3S1-209ENST00000640413 C1orf127Q8N9H9 656 aa7.98□□□□□ -1.13
AP3S1-209ENST00000640413 WNT8BQ93098 351 aa7.98□□□□□ -1.13
AP3S1-209ENST00000640413 ADGRE2Q9UHX3 823 aa7.98□□□□□ -1.13
AP3S1-209ENST00000640413 SRPK2P78362 688 aaKnown RBP7.97□□□□□ -1.13
AP3S1-209ENST00000640413 SGO2Q562F6 1265 aa7.97□□□□□ -1.13
AP3S1-209ENST00000640413 DZANK1Q9NVP4 752 aa7.97□□□□□ -1.13
AP3S1-209ENST00000640413 SEPT3Q9UH03 358 aa7.97□□□□□ -1.13
AP3S1-209ENST00000640413 PDE2AO00408 941 aaPredicted RBP7.96□□□□□ -1.14
AP3S1-209ENST00000640413 GAS2O43903 313 aaKnown RBP7.96□□□□□ -1.14
AP3S1-209ENST00000640413 CES1P23141 567 aa7.96□□□□□ -1.14
AP3S1-209ENST00000640413 MAP4P27816 1152 aaKnown RBP7.96□□□□□ -1.14
AP3S1-209ENST00000640413 SLAIN2Q9P270 581 aa7.96□□□□□ -1.14
AP3S1-209ENST00000640413 HIF3AQ9Y2N7 669 aa7.96□□□□□ -1.14
AP3S1-209ENST00000640413 A6NHS1 94 aa7.95□□□□□ -1.14
AP3S1-209ENST00000640413 ATG7O95352 703 aa7.95□□□□□ -1.14
AP3S1-209ENST00000640413 FBXL6Q8N531 539 aa7.95□□□□□ -1.14
AP3S1-209ENST00000640413 EDEM1Q92611 657 aa7.95□□□□□ -1.14
AP3S1-209ENST00000640413 CLP1Q92989 425 aaKnown RBP7.95□□□□□ -1.14
AP3S1-209ENST00000640413 GGNBP2Q9H3C7 697 aa7.95□□□□□ -1.14
AP3S1-209ENST00000640413 PIM2Q9P1W9 311 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms