RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 MAP4K1Q92918 833 aa26.12■■□□□ 1.77
SCARB2-212ENST00000638663 MINPP1Q9UNW1 487 aa26.12■■□□□ 1.77
SCARB2-212ENST00000638663 KCNJ4P48050 445 aa26.11■■□□□ 1.77
SCARB2-212ENST00000638663 PRPF40BQ6NWY9 871 aaKnown RBP26.11■■□□□ 1.77
SCARB2-212ENST00000638663 RBM8AQ9Y5S9 174 aaKnown RBP26.11■■□□□ 1.77
SCARB2-212ENST00000638663 RNF113AO15541 343 aaKnown RBP26.1■■□□□ 1.77
SCARB2-212ENST00000638663 AKAP11Q9UKA4 1901 aa26.1■■□□□ 1.77
SCARB2-212ENST00000638663 COL23A1Q86Y22 540 aaPredicted RBP26.1■■□□□ 1.77
SCARB2-212ENST00000638663 DDR1Q08345 913 aa26.09■■□□□ 1.77
SCARB2-212ENST00000638663 NECTIN1Q15223 517 aa26.09■■□□□ 1.77
SCARB2-212ENST00000638663 ZMYM1Q5SVZ6 1142 aa26.09■■□□□ 1.77
SCARB2-212ENST00000638663 HELLSQ9NRZ9 838 aa26.09■■□□□ 1.77
SCARB2-212ENST00000638663 UPF3BQ9BZI7 483 aaKnown RBP26.08■■□□□ 1.77
SCARB2-212ENST00000638663 CYP2E1P05181 493 aaPredicted RBP26.08■■□□□ 1.76
SCARB2-212ENST00000638663 BCAMP50895 628 aa26.08■■□□□ 1.76
SCARB2-212ENST00000638663 ST5P78524 1137 aa26.08■■□□□ 1.76
SCARB2-212ENST00000638663 LRRFIP1Q32MZ4 808 aaKnown RBP26.08■■□□□ 1.76
SCARB2-212ENST00000638663 HMG20BQ9P0W2 317 aa26.07■■□□□ 1.76
SCARB2-212ENST00000638663 WTIPA6NIX2 430 aaPredicted RBP26.06■■□□□ 1.76
SCARB2-212ENST00000638663 POLRMTO00411 1230 aaKnown RBP26.06■■□□□ 1.76
SCARB2-212ENST00000638663 A0A1B0GUL6 1792 aa26.06■■□□□ 1.76
SCARB2-212ENST00000638663 UBE4AQ14139 1066 aa26.06■■□□□ 1.76
SCARB2-212ENST00000638663 CREB3L3Q68CJ9 461 aa26.06■■□□□ 1.76
SCARB2-212ENST00000638663 KCNB2Q92953 911 aa26.06■■□□□ 1.76
SCARB2-212ENST00000638663 HSP90AA1P07900 732 aaKnown RBP26.05■■□□□ 1.76
SCARB2-212ENST00000638663 RASGRF1Q13972 1273 aa26.05■■□□□ 1.76
SCARB2-212ENST00000638663 TTF1Q15361 905 aaPredicted RBP26.05■■□□□ 1.76
SCARB2-212ENST00000638663 SPATA5Q8NB90 893 aa26.05■■□□□ 1.76
SCARB2-212ENST00000638663 PIH1D3Q9NQM4 214 aaKnown RBP26.05■■□□□ 1.76
SCARB2-212ENST00000638663 ZFYP08048 801 aaPredicted RBP26.04■■□□□ 1.76
SCARB2-212ENST00000638663 ANP32EQ9BTT0 268 aa26.04■■□□□ 1.76
SCARB2-212ENST00000638663 MAST3O60307 1309 aa26.04■■□□□ 1.76
SCARB2-212ENST00000638663 SLC27A2O14975 620 aa26.04■■□□□ 1.76
SCARB2-212ENST00000638663 FLAD1Q8NFF5 587 aa26.04■■□□□ 1.76
SCARB2-212ENST00000638663 FOXD4L1Q9NU39 408 aa26.04■■□□□ 1.76
SCARB2-212ENST00000638663 ZKSCAN1P17029 563 aaPredicted RBP26.03■■□□□ 1.76
SCARB2-212ENST00000638663 GRAPQ13588 217 aa26.03■■□□□ 1.76
SCARB2-212ENST00000638663 WASHC4Q2M389 1173 aa26.03■■□□□ 1.76
SCARB2-212ENST00000638663 GRAPLQ8TC17 118 aaPredicted RBP26.03■■□□□ 1.76
SCARB2-212ENST00000638663 OSBP2Q969R2 916 aa26.03■■□□□ 1.76
SCARB2-212ENST00000638663 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.03■■□□□ 1.76
SCARB2-212ENST00000638663 RGPD3A6NKT7 1758 aaPredicted RBP26.02■■□□□ 1.76
SCARB2-212ENST00000638663 RGPD4Q7Z3J3 1758 aa26.02■■□□□ 1.76
SCARB2-212ENST00000638663 M0R2C6 588 aa26.02■■□□□ 1.76
SCARB2-212ENST00000638663 NLGN1Q8N2Q7 840 aa26.02■■□□□ 1.76
SCARB2-212ENST00000638663 RPGRQ92834 1020 aaKnown RBP26.02■■□□□ 1.76
SCARB2-212ENST00000638663 ANKRD2Q9GZV1 360 aa26.02■■□□□ 1.76
SCARB2-212ENST00000638663 IDH1O75874 414 aaKnown RBP26.02■■□□□ 1.76
SCARB2-212ENST00000638663 GYG1P46976 350 aa26.02■■□□□ 1.76
SCARB2-212ENST00000638663 EN1Q05925 392 aaPredicted RBP26.02■■□□□ 1.76
SCARB2-212ENST00000638663 EZH2Q15910 746 aaKnown RBP26.02■■□□□ 1.76
SCARB2-212ENST00000638663 ADCK5Q3MIX3 580 aa26.01■■□□□ 1.75
SCARB2-212ENST00000638663 RNF20Q5VTR2 975 aa26.01■■□□□ 1.75
SCARB2-212ENST00000638663 PNPLA7Q6ZV29 1317 aa26.01■■□□□ 1.75
SCARB2-212ENST00000638663 CASTP20810 708 aaKnown RBP26■■□□□ 1.75
SCARB2-212ENST00000638663 CRY2Q49AN0 593 aa26■■□□□ 1.75
SCARB2-212ENST00000638663 VPS53Q5VIR6 699 aa26■■□□□ 1.75
SCARB2-212ENST00000638663 APPBP2Q92624 585 aa26■■□□□ 1.75
SCARB2-212ENST00000638663 JAKMIP1Q96N16 626 aaKnown RBP26■■□□□ 1.75
SCARB2-212ENST00000638663 U3KPZ7 1027 aaPredicted RBP26■■□□□ 1.75
SCARB2-212ENST00000638663 NBR1Q14596 966 aa26■■□□□ 1.75
SCARB2-212ENST00000638663 SLC9C2Q5TAH2 1124 aa26■■□□□ 1.75
SCARB2-212ENST00000638663 ZSCAN25Q6NSZ9 544 aa26■■□□□ 1.75
SCARB2-212ENST00000638663 IQSEC3Q9UPP2 1182 aaPredicted RBP26■■□□□ 1.75
SCARB2-212ENST00000638663 MCM2P49736 904 aa25.99■■□□□ 1.75
SCARB2-212ENST00000638663 NOL8Q76FK4 1167 aaKnown RBP25.99■■□□□ 1.75
SCARB2-212ENST00000638663 CAMKK2Q96RR4 588 aa25.99■■□□□ 1.75
SCARB2-212ENST00000638663 MYH7P12883 1935 aa25.99■■□□□ 1.75
SCARB2-212ENST00000638663 ZNF804BA4D1E1 1349 aa25.98■■□□□ 1.75
SCARB2-212ENST00000638663 CPA1P15085 419 aa25.98■■□□□ 1.75
SCARB2-212ENST00000638663 ADD2P35612 726 aa25.98■■□□□ 1.75
SCARB2-212ENST00000638663 CAVIN4Q5BKX8 364 aa25.98■■□□□ 1.75
SCARB2-212ENST00000638663 PUS7LQ9H0K6 701 aaKnown RBP25.98■■□□□ 1.75
SCARB2-212ENST00000638663 KLRK1P26718 216 aa25.98■■□□□ 1.75
SCARB2-212ENST00000638663 SLC51AQ86UW1 340 aa25.98■■□□□ 1.75
SCARB2-212ENST00000638663 DSCC1Q9BVC3 393 aa25.98■■□□□ 1.75
SCARB2-212ENST00000638663 TAF6LQ9Y6J9 622 aa25.98■■□□□ 1.75
SCARB2-212ENST00000638663 MYO5AQ9Y4I1 1855 aaKnown RBP25.97■■□□□ 1.75
SCARB2-212ENST00000638663 HSPD1P10809 573 aaKnown RBP25.97■■□□□ 1.75
SCARB2-212ENST00000638663 VPS37DQ86XT2 251 aa25.97■■□□□ 1.75
SCARB2-212ENST00000638663 FAM84BQ96KN1 310 aaPredicted RBP25.97■■□□□ 1.75
SCARB2-212ENST00000638663 TM6SF1Q9BZW5 370 aa25.97■■□□□ 1.75
SCARB2-212ENST00000638663 ANO8Q9HCE9 1232 aaPredicted RBP25.97■■□□□ 1.75
SCARB2-212ENST00000638663 GNL3LQ9NVN8 582 aaKnown RBP25.97■■□□□ 1.75
SCARB2-212ENST00000638663 WWC3Q9ULE0 1092 aa25.97■■□□□ 1.75
SCARB2-212ENST00000638663 DDIT3P35638 169 aa25.96■■□□□ 1.75
SCARB2-212ENST00000638663 IL27Q8NEV9 243 aa25.96■■□□□ 1.75
SCARB2-212ENST00000638663 RBM17Q96I25 401 aaKnown RBP25.96■■□□□ 1.75
SCARB2-212ENST00000638663 CHMP5Q9NZZ3 219 aa25.96■■□□□ 1.75
SCARB2-212ENST00000638663 PDE6AP16499 860 aa25.96■■□□□ 1.75
SCARB2-212ENST00000638663 MSL1Q68DK7 614 aa25.96■■□□□ 1.75
SCARB2-212ENST00000638663 TMX3Q96JJ7 454 aa25.96■■□□□ 1.75
SCARB2-212ENST00000638663 TTC14Q96N46 770 aa25.96■■□□□ 1.75
SCARB2-212ENST00000638663 ZSWIM6Q9HCJ5 1215 aa25.96■■□□□ 1.75
SCARB2-212ENST00000638663 CYP46A1Q9Y6A2 500 aa25.95■■□□□ 1.74
SCARB2-212ENST00000638663 ZNF532Q9HCE3 1301 aa25.95■■□□□ 1.74
SCARB2-212ENST00000638663 MMP10P09238 476 aa25.94■■□□□ 1.74
SCARB2-212ENST00000638663 UBE3CQ15386 1083 aa25.94■■□□□ 1.74
SCARB2-212ENST00000638663 ANKIB1Q9P2G1 1089 aa25.94■■□□□ 1.74
SCARB2-212ENST00000638663 MAP3K12Q12852 859 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms