RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 TYRO3Q06418 890 aa16.49■□□□□ 0.23
SCARB2-208ENST00000638372 AOPEPQ8N6M6 819 aa16.49■□□□□ 0.23
SCARB2-208ENST00000638372 NCOA5Q9HCD5 579 aaKnown RBP16.49■□□□□ 0.23
SCARB2-208ENST00000638372 KIAA0232Q92628 1395 aa16.49■□□□□ 0.23
SCARB2-208ENST00000638372 ST5P78524 1137 aa16.49■□□□□ 0.23
SCARB2-208ENST00000638372 PICALMQ13492 652 aa16.49■□□□□ 0.23
SCARB2-208ENST00000638372 CALML4Q96GE6 196 aa16.49■□□□□ 0.23
SCARB2-208ENST00000638372 TDRD12Q587J7 1177 aaKnown RBP16.49■□□□□ 0.23
SCARB2-208ENST00000638372 FEZ1Q99689 392 aa16.49■□□□□ 0.23
SCARB2-208ENST00000638372 SH3TC1Q8TE82 1336 aa16.49■□□□□ 0.23
SCARB2-208ENST00000638372 PPP1R12BO60237 982 aaPredicted RBP16.49■□□□□ 0.23
SCARB2-208ENST00000638372 NEMFO60524 1076 aa16.49■□□□□ 0.23
SCARB2-208ENST00000638372 HLA-DOAP06340 250 aa16.49■□□□□ 0.23
SCARB2-208ENST00000638372 RTCBQ9Y3I0 505 aaKnown RBP16.49■□□□□ 0.23
SCARB2-208ENST00000638372 RTL1A6NKG5 1358 aa16.49■□□□□ 0.23
SCARB2-208ENST00000638372 ZNF521Q96K83 1311 aa16.48■□□□□ 0.23
SCARB2-208ENST00000638372 UBASH3AP57075 661 aa16.48■□□□□ 0.23
SCARB2-208ENST00000638372 TSG101Q99816 390 aa16.48■□□□□ 0.23
SCARB2-208ENST00000638372 N4BP3O15049 544 aa16.48■□□□□ 0.23
SCARB2-208ENST00000638372 HEATR3Q7Z4Q2 680 aa16.48■□□□□ 0.23
SCARB2-208ENST00000638372 CCDC102AQ96A19 550 aa16.48■□□□□ 0.23
SCARB2-208ENST00000638372 XAGE2Q96GT9 111 aa16.48■□□□□ 0.23
SCARB2-208ENST00000638372 PLA2R1Q13018 1463 aa16.48■□□□□ 0.23
SCARB2-208ENST00000638372 KANK3Q6NY19 840 aa16.48■□□□□ 0.23
SCARB2-208ENST00000638372 CUL5Q93034 780 aa16.48■□□□□ 0.23
SCARB2-208ENST00000638372 WWC3Q9ULE0 1092 aa16.48■□□□□ 0.23
SCARB2-208ENST00000638372 MATR3P43243 847 aaKnown RBP eCLIP16.48■□□□□ 0.23
SCARB2-208ENST00000638372 B4E1Z4 1266 aa16.47■□□□□ 0.23
SCARB2-208ENST00000638372 RPS6KB1P23443 525 aa16.47■□□□□ 0.23
SCARB2-208ENST00000638372 TMCO3Q6UWJ1 677 aa16.47■□□□□ 0.23
SCARB2-208ENST00000638372 ARHGEF10O15013 1369 aa16.47■□□□□ 0.23
SCARB2-208ENST00000638372 H0YHG0 523 aa16.47■□□□□ 0.23
SCARB2-208ENST00000638372 RRP9O43818 475 aaKnown RBP16.47■□□□□ 0.23
SCARB2-208ENST00000638372 TCERG1LQ5VWI1 586 aa16.47■□□□□ 0.23
SCARB2-208ENST00000638372 TAF4BQ92750 862 aa16.47■□□□□ 0.23
SCARB2-208ENST00000638372 KDM5CP41229 1560 aa16.47■□□□□ 0.23
SCARB2-208ENST00000638372 TRIM75PA6NK02 468 aa16.47■□□□□ 0.23
SCARB2-208ENST00000638372 GSTO1P78417 241 aa16.47■□□□□ 0.23
SCARB2-208ENST00000638372 MYO5CQ9NQX4 1742 aa16.47■□□□□ 0.23
SCARB2-208ENST00000638372 TAF5LO75529 589 aa16.46■□□□□ 0.23
SCARB2-208ENST00000638372 YEATS4O95619 227 aa16.46■□□□□ 0.23
SCARB2-208ENST00000638372 LEKR1Q6ZMV7 388 aa16.46■□□□□ 0.23
SCARB2-208ENST00000638372 KBTBD3Q8NAB2 608 aa16.46■□□□□ 0.23
SCARB2-208ENST00000638372 CCDC148Q8NFR7 591 aa16.46■□□□□ 0.23
SCARB2-208ENST00000638372 SKILP12757 684 aa16.46■□□□□ 0.23
SCARB2-208ENST00000638372 SSH3Q8TE77 659 aa16.46■□□□□ 0.23
SCARB2-208ENST00000638372 CABP5Q9NP86 173 aa16.46■□□□□ 0.23
SCARB2-208ENST00000638372 GNPATO15228 680 aa16.46■□□□□ 0.23
SCARB2-208ENST00000638372 EIF3JO75822 258 aaKnown RBP16.46■□□□□ 0.23
SCARB2-208ENST00000638372 TNIP1Q15025 636 aa16.46■□□□□ 0.23
SCARB2-208ENST00000638372 CCDC24Q8N4L8 307 aa16.46■□□□□ 0.23
SCARB2-208ENST00000638372 DHX58Q96C10 678 aa16.46■□□□□ 0.23
SCARB2-208ENST00000638372 HELLSQ9NRZ9 838 aa16.46■□□□□ 0.23
SCARB2-208ENST00000638372 FBXO3Q9UK99 471 aa16.46■□□□□ 0.23
SCARB2-208ENST00000638372 CASQ1P31415 396 aa16.45■□□□□ 0.22
SCARB2-208ENST00000638372 OTUD7BQ6GQQ9 843 aa16.45■□□□□ 0.22
SCARB2-208ENST00000638372 ZSWIM4Q9H7M6 989 aa16.45■□□□□ 0.22
SCARB2-208ENST00000638372 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.45■□□□□ 0.22
SCARB2-208ENST00000638372 TTC37Q6PGP7 1564 aa16.45■□□□□ 0.22
SCARB2-208ENST00000638372 NEURL1BA8MQ27 555 aa16.45■□□□□ 0.22
SCARB2-208ENST00000638372 ERLIN2O94905 339 aa16.45■□□□□ 0.22
SCARB2-208ENST00000638372 SNW1Q13573 536 aaKnown RBP16.45■□□□□ 0.22
SCARB2-208ENST00000638372 WDR78Q5VTH9 848 aa16.45■□□□□ 0.22
SCARB2-208ENST00000638372 TRIM47Q96LD4 638 aa16.45■□□□□ 0.22
SCARB2-208ENST00000638372 SLAIN2Q9P270 581 aa16.45■□□□□ 0.22
SCARB2-208ENST00000638372 KDM5AP29375 1690 aaKnown RBP16.45■□□□□ 0.22
SCARB2-208ENST00000638372 A0A1B0GVL5 298 aa16.45■□□□□ 0.22
SCARB2-208ENST00000638372 GOLGA6L10A6NI86 522 aa16.45■□□□□ 0.22
SCARB2-208ENST00000638372 GPAA1O43292 621 aa16.45■□□□□ 0.22
SCARB2-208ENST00000638372 AMPD3Q01432 767 aa16.45■□□□□ 0.22
SCARB2-208ENST00000638372 RRAGBQ5VZM2 374 aa16.45■□□□□ 0.22
SCARB2-208ENST00000638372 WWC2Q6AWC2 1192 aa16.45■□□□□ 0.22
SCARB2-208ENST00000638372 EAF2Q96CJ1 260 aaPredicted RBP16.45■□□□□ 0.22
SCARB2-208ENST00000638372 ZC3H12CQ9C0D7 883 aaKnown RBP16.45■□□□□ 0.22
SCARB2-208ENST00000638372 CBX1P83916 185 aa16.45■□□□□ 0.22
SCARB2-208ENST00000638372 LUZP1Q86V48 1076 aa16.45■□□□□ 0.22
SCARB2-208ENST00000638372 GNAT2P19087 354 aa16.44■□□□□ 0.22
SCARB2-208ENST00000638372 RDXP35241 583 aaKnown RBP16.44■□□□□ 0.22
SCARB2-208ENST00000638372 NOLC1Q14978 699 aaKnown RBP eCLIP16.44■□□□□ 0.22
SCARB2-208ENST00000638372 CCDC40Q4G0X9 1142 aa16.44■□□□□ 0.22
SCARB2-208ENST00000638372 PRDM1O75626 825 aa16.44■□□□□ 0.22
SCARB2-208ENST00000638372 CLCN1P35523 988 aa16.44■□□□□ 0.22
SCARB2-208ENST00000638372 GNG11P61952 73 aa16.44■□□□□ 0.22
SCARB2-208ENST00000638372 NYXQ9GZU5 481 aa16.44■□□□□ 0.22
SCARB2-208ENST00000638372 TSPYL1Q9H0U9 437 aa16.44■□□□□ 0.22
SCARB2-208ENST00000638372 ZKSCAN5Q9Y2L8 839 aa16.44■□□□□ 0.22
SCARB2-208ENST00000638372 CCDC66A2RUB6 948 aa16.44■□□□□ 0.22
SCARB2-208ENST00000638372 FGFR1OPO95684 399 aaKnown RBP16.44■□□□□ 0.22
SCARB2-208ENST00000638372 IQCEQ6IPM2 695 aa16.44■□□□□ 0.22
SCARB2-208ENST00000638372 CWC15Q9P013 229 aaKnown RBP16.44■□□□□ 0.22
SCARB2-208ENST00000638372 PLXNC1O60486 1568 aa16.44■□□□□ 0.22
SCARB2-208ENST00000638372 SSR1P43307 286 aaKnown RBP16.43■□□□□ 0.22
SCARB2-208ENST00000638372 APPBP2Q92624 585 aa16.43■□□□□ 0.22
SCARB2-208ENST00000638372 ARMT1Q9H993 441 aa16.43■□□□□ 0.22
SCARB2-208ENST00000638372 AOX1Q06278 1338 aa16.43■□□□□ 0.22
SCARB2-208ENST00000638372 PRR36Q9H6K5 1346 aa16.43■□□□□ 0.22
SCARB2-208ENST00000638372 NAPAP54920 295 aa16.43■□□□□ 0.22
SCARB2-208ENST00000638372 TAF3Q5VWG9 929 aa16.43■□□□□ 0.22
SCARB2-208ENST00000638372 PALD1Q9ULE6 856 aa16.43■□□□□ 0.22
SCARB2-208ENST00000638372 STAT6P42226 847 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms