RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 CLCN1P35523 988 aa21.93■■□□□ 1.1
CTSD-212ENST00000637815 SCARF1Q14162 830 aa21.93■■□□□ 1.1
CTSD-212ENST00000637815 METTL24Q5JXM2 366 aa21.93■■□□□ 1.1
CTSD-212ENST00000637815 LDHAL6AQ6ZMR3 332 aa21.93■■□□□ 1.1
CTSD-212ENST00000637815 ZNF34Q8IZ26 560 aa21.93■■□□□ 1.1
CTSD-212ENST00000637815 KLHL34Q8N239 644 aa21.93■■□□□ 1.1
CTSD-212ENST00000637815 VGLL2Q8N8G2 317 aa21.93■■□□□ 1.1
CTSD-212ENST00000637815 MYH15Q9Y2K3 1946 aa21.93■■□□□ 1.1
CTSD-212ENST00000637815 UBN2Q6ZU65 1347 aa21.93■■□□□ 1.1
CTSD-212ENST00000637815 DDX60Q8IY21 1712 aaKnown RBP21.92■■□□□ 1.1
CTSD-212ENST00000637815 EXOSC10Q01780 885 aaKnown RBP21.92■■□□□ 1.1
CTSD-212ENST00000637815 ZNF512BQ96KM6 892 aaPredicted RBP21.92■■□□□ 1.1
CTSD-212ENST00000637815 BRF1Q92994 677 aa21.92■■□□□ 1.1
CTSD-212ENST00000637815 MYH14Q7Z406 1995 aaKnown RBP21.92■■□□□ 1.1
CTSD-212ENST00000637815 E7EWF7 191 aa21.91■■□□□ 1.1
CTSD-212ENST00000637815 EIF5P55010 431 aaKnown RBP21.91■■□□□ 1.1
CTSD-212ENST00000637815 PFKFB2O60825 505 aa21.9■■□□□ 1.1
CTSD-212ENST00000637815 LETM1O95202 739 aaPredicted RBP21.9■■□□□ 1.1
CTSD-212ENST00000637815 ZAP70P43403 619 aa21.9■■□□□ 1.1
CTSD-212ENST00000637815 AK7Q96M32 723 aa21.9■■□□□ 1.1
CTSD-212ENST00000637815 LLPHQ9BRT6 129 aaKnown RBP21.9■■□□□ 1.1
CTSD-212ENST00000637815 TBC1D2BQ9UPU7 963 aa21.9■■□□□ 1.1
CTSD-212ENST00000637815 LAMB2P55268 1798 aa21.9■■□□□ 1.1
CTSD-212ENST00000637815 ELP1O95163 1332 aa21.9■■□□□ 1.1
CTSD-212ENST00000637815 HSP90B1P14625 803 aaKnown RBP21.9■■□□□ 1.1
CTSD-212ENST00000637815 KRT85P78386 507 aa21.9■■□□□ 1.1
CTSD-212ENST00000637815 DDB1Q16531 1140 aa21.9■■□□□ 1.1
CTSD-212ENST00000637815 APPBP2Q92624 585 aa21.9■■□□□ 1.1
CTSD-212ENST00000637815 CNNM1Q9NRU3 951 aa21.9■■□□□ 1.1
CTSD-212ENST00000637815 FOXP2O15409 715 aa21.89■■□□□ 1.1
CTSD-212ENST00000637815 JAK2O60674 1132 aa21.89■■□□□ 1.1
CTSD-212ENST00000637815 INTS5Q6P9B9 1019 aaKnown RBP21.89■■□□□ 1.1
CTSD-212ENST00000637815 SMARCC2Q8TAQ2 1214 aa21.89■■□□□ 1.1
CTSD-212ENST00000637815 A0A0G2JLW4 131 aa21.89■■□□□ 1.09
CTSD-212ENST00000637815 SCRN1Q12765 414 aa21.89■■□□□ 1.09
CTSD-212ENST00000637815 FBXL16Q8N461 479 aa21.89■■□□□ 1.09
CTSD-212ENST00000637815 LRRC2Q9BYS8 371 aa21.89■■□□□ 1.09
CTSD-212ENST00000637815 CTNNA3Q9UI47 895 aa21.89■■□□□ 1.09
CTSD-212ENST00000637815 MCAMP43121 646 aa21.88■■□□□ 1.09
CTSD-212ENST00000637815 FGD1P98174 961 aa21.88■■□□□ 1.09
CTSD-212ENST00000637815 FERMT3Q86UX7 667 aa21.88■■□□□ 1.09
CTSD-212ENST00000637815 CCDC87Q9NVE4 849 aa21.88■■□□□ 1.09
CTSD-212ENST00000637815 ATRNO75882 1429 aa21.88■■□□□ 1.09
CTSD-212ENST00000637815 PDE8BO95263 885 aa21.87■■□□□ 1.09
CTSD-212ENST00000637815 HS1BP3Q53T59 392 aa21.87■■□□□ 1.09
CTSD-212ENST00000637815 WASHC4Q2M389 1173 aa21.87■■□□□ 1.09
CTSD-212ENST00000637815 PI16Q6UXB8 463 aa21.87■■□□□ 1.09
CTSD-212ENST00000637815 TTC6Q86TZ1 520 aa21.87■■□□□ 1.09
CTSD-212ENST00000637815 COL5A3P25940 1745 aaPredicted RBP21.86■■□□□ 1.09
CTSD-212ENST00000637815 DOCK2Q92608 1830 aa21.86■■□□□ 1.09
CTSD-212ENST00000637815 ADAMTS2O95450 1211 aa21.86■■□□□ 1.09
CTSD-212ENST00000637815 TTLL5Q6EMB2 1281 aa21.86■■□□□ 1.09
CTSD-212ENST00000637815 FAM184AQ8NB25 1140 aa21.86■■□□□ 1.09
CTSD-212ENST00000637815 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.85■■□□□ 1.092e-6■■■□□ 17.7
CTSD-212ENST00000637815 SPATA31A5Q5VU36 1347 aa21.85■■□□□ 1.09
CTSD-212ENST00000637815 SPATA31A7Q8IWB4 1347 aa21.85■■□□□ 1.09
CTSD-212ENST00000637815 ZNF831Q5JPB2 1677 aa21.85■■□□□ 1.09
CTSD-212ENST00000637815 BCORQ6W2J9 1755 aa21.85■■□□□ 1.09
CTSD-212ENST00000637815 CRKLP46109 303 aaKnown RBP21.85■■□□□ 1.09
CTSD-212ENST00000637815 APOBRQ0VD83 1088 aa21.85■■□□□ 1.09
CTSD-212ENST00000637815 MARCH10Q8NA82 808 aaPredicted RBP21.85■■□□□ 1.09
CTSD-212ENST00000637815 RNF214Q8ND24 703 aa21.85■■□□□ 1.09
CTSD-212ENST00000637815 NSUN7Q8NE18 718 aaKnown RBP21.85■■□□□ 1.09
CTSD-212ENST00000637815 SCAND2PQ9GZW5 306 aaPredicted RBP21.85■■□□□ 1.09
CTSD-212ENST00000637815 PUS7LQ9H0K6 701 aaKnown RBP21.85■■□□□ 1.09
CTSD-212ENST00000637815 ARID4AP29374 1257 aaPredicted RBP21.84■■□□□ 1.09
CTSD-212ENST00000637815 TTF1Q15361 905 aaPredicted RBP21.84■■□□□ 1.09
CTSD-212ENST00000637815 IMMTQ16891 758 aaKnown RBP21.84■■□□□ 1.09
CTSD-212ENST00000637815 ZSCAN25Q6NSZ9 544 aa21.84■■□□□ 1.09
CTSD-212ENST00000637815 ZNF274Q96GC6 653 aaPredicted RBP21.84■■□□□ 1.09
CTSD-212ENST00000637815 MROH5Q6ZUA9 1318 aa21.84■■□□□ 1.09
CTSD-212ENST00000637815 LOC102724428A0A0B4J2F2 783 aa21.84■■□□□ 1.09
CTSD-212ENST00000637815 FGAP02671 866 aa21.84■■□□□ 1.09
CTSD-212ENST00000637815 ATP6V1AP38606 617 aa21.84■■□□□ 1.09
CTSD-212ENST00000637815 SIK1P57059 783 aa21.84■■□□□ 1.09
CTSD-212ENST00000637815 EVCP57679 992 aa21.84■■□□□ 1.09
CTSD-212ENST00000637815 RESTQ13127 1097 aa21.84■■□□□ 1.09
CTSD-212ENST00000637815 FAM173BQ6P4H8 233 aa21.84■■□□□ 1.09
CTSD-212ENST00000637815 SALL1Q9NSC2 1324 aa21.83■■□□□ 1.09
CTSD-212ENST00000637815 CTDNEP1O95476 244 aa21.83■■□□□ 1.09
CTSD-212ENST00000637815 FGFR2P21802 821 aa21.83■■□□□ 1.09
CTSD-212ENST00000637815 ADD2P35612 726 aa21.83■■□□□ 1.09
CTSD-212ENST00000637815 HMGN5P82970 282 aaKnown RBP21.83■■□□□ 1.09
CTSD-212ENST00000637815 PUM3Q15397 648 aaKnown RBP21.83■■□□□ 1.09
CTSD-212ENST00000637815 SUSD4Q5VX71 490 aa21.83■■□□□ 1.09
CTSD-212ENST00000637815 GPAA1O43292 621 aa21.82■■□□□ 1.08
CTSD-212ENST00000637815 BARGINQ6ZT62 677 aa21.82■■□□□ 1.08
CTSD-212ENST00000637815 ZSCAN30Q86W11 494 aa21.82■■□□□ 1.08
CTSD-212ENST00000637815 ZSCAN16Q9H4T2 348 aaPredicted RBP21.82■■□□□ 1.08
CTSD-212ENST00000637815 CAMTA2O94983 1202 aa21.82■■□□□ 1.08
CTSD-212ENST00000637815 UVSSAQ2YD98 709 aa21.82■■□□□ 1.08
CTSD-212ENST00000637815 CCDC102BQ68D86 513 aa21.82■■□□□ 1.08
CTSD-212ENST00000637815 LPIN2Q92539 896 aa21.82■■□□□ 1.08
CTSD-212ENST00000637815 CHMP4CQ96CF2 233 aa21.82■■□□□ 1.08
CTSD-212ENST00000637815 ACSBG1Q96GR2 724 aa21.82■■□□□ 1.08
CTSD-212ENST00000637815 FUCA2Q9BTY2 467 aa21.82■■□□□ 1.08
CTSD-212ENST00000637815 UQCRFS1P1P0C7P4 283 aa21.81■■□□□ 1.08
CTSD-212ENST00000637815 PDIA3P30101 505 aaKnown RBP21.81■■□□□ 1.08
CTSD-212ENST00000637815 PARP10Q53GL7 1025 aa21.81■■□□□ 1.08
CTSD-212ENST00000637815 NAA16Q6N069 864 aaPredicted RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms