RNA–Protein interactions for RNA: ENST00000637789.1

CHD2-229, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-229ENST00000637789 PPP1R42Q7Z4L9 355 aa13.22□□□□□ -0.29
CHD2-229ENST00000637789 GMLQ99445 158 aa13.22□□□□□ -0.29
CHD2-229ENST00000637789 RNF208Q9H0X6 261 aa13.22□□□□□ -0.29
CHD2-229ENST00000637789 ANKRD36CQ5JPF3 1778 aa13.22□□□□□ -0.29
CHD2-229ENST00000637789 GNAT3A8MTJ3 354 aa13.21□□□□□ -0.29
CHD2-229ENST00000637789 MAGEA10P43363 369 aaPredicted RBP13.21□□□□□ -0.29
CHD2-229ENST00000637789 TMC4Q7Z404 712 aa13.21□□□□□ -0.29
CHD2-229ENST00000637789 ZBTB3Q9H5J0 574 aa13.21□□□□□ -0.29
CHD2-229ENST00000637789 PRMT2P55345 433 aa13.2□□□□□ -0.3
CHD2-229ENST00000637789 GPSM2P81274 684 aa13.2□□□□□ -0.3
CHD2-229ENST00000637789 TAF1CQ15572 869 aaPredicted RBP13.2□□□□□ -0.3
CHD2-229ENST00000637789 MAP3K11Q16584 847 aa13.2□□□□□ -0.3
CHD2-229ENST00000637789 C7orf61Q8IZ16 206 aa13.2□□□□□ -0.3
CHD2-229ENST00000637789 EYA3Q99504 573 aa13.2□□□□□ -0.3
CHD2-229ENST00000637789 ZFYVE28Q9HCC9 887 aa13.2□□□□□ -0.3
CHD2-229ENST00000637789 CEMIPQ8WUJ3 1361 aa13.2□□□□□ -0.3
CHD2-229ENST00000637789 WNT10BO00744 389 aa13.19□□□□□ -0.3
CHD2-229ENST00000637789 SYN1P17600 705 aa13.19□□□□□ -0.3
CHD2-229ENST00000637789 LACTBP83111 547 aaPredicted RBP13.19□□□□□ -0.3
CHD2-229ENST00000637789 KIF22Q14807 665 aa13.19□□□□□ -0.3
CHD2-229ENST00000637789 TJAP1Q5JTD0 557 aa13.19□□□□□ -0.3
CHD2-229ENST00000637789 KIF6Q6ZMV9 814 aa13.19□□□□□ -0.3
CHD2-229ENST00000637789 CDX2Q99626 313 aaPredicted RBP13.19□□□□□ -0.3
CHD2-229ENST00000637789 UBE2OQ9C0C9 1292 aaKnown RBP13.19□□□□□ -0.3
CHD2-229ENST00000637789 SGPL1O95470 568 aa13.18□□□□□ -0.3
CHD2-229ENST00000637789 GNRH1P01148 92 aa13.18□□□□□ -0.3
CHD2-229ENST00000637789 HCLS1P14317 486 aaPredicted RBP13.18□□□□□ -0.3
CHD2-229ENST00000637789 GRK4P32298 578 aa13.18□□□□□ -0.3
CHD2-229ENST00000637789 PARP10Q53GL7 1025 aa13.18□□□□□ -0.3
CHD2-229ENST00000637789 TBC1D16Q8TBP0 767 aa13.18□□□□□ -0.3
CHD2-229ENST00000637789 UTP14AQ9BVJ6 771 aaKnown RBP13.18□□□□□ -0.3
CHD2-229ENST00000637789 RIPOR2Q9Y4F9 1068 aa13.18□□□□□ -0.3
CHD2-229ENST00000637789 PSME4Q14997 1843 aa13.18□□□□□ -0.3
CHD2-229ENST00000637789 G3V3G9 751 aa13.17□□□□□ -0.3
CHD2-229ENST00000637789 DCAF8Q5TAQ9 597 aa13.17□□□□□ -0.3
CHD2-229ENST00000637789 ZC3H12CQ9C0D7 883 aaKnown RBP13.17□□□□□ -0.3
CHD2-229ENST00000637789 SASH1O94885 1247 aa13.16□□□□□ -0.3
CHD2-229ENST00000637789 ZNF697Q5TEC3 545 aa13.16□□□□□ -0.3
CHD2-229ENST00000637789 PAWRQ96IZ0 340 aaKnown RBP13.16□□□□□ -0.3
CHD2-229ENST00000637789 MS4A4AQ96JQ5 239 aa13.16□□□□□ -0.3
CHD2-229ENST00000637789 UNC93B1Q9H1C4 597 aa13.16□□□□□ -0.3
CHD2-229ENST00000637789 BIN2Q9UBW5 565 aaPredicted RBP13.16□□□□□ -0.3
CHD2-229ENST00000637789 SRRDQ9UH36 339 aa13.16□□□□□ -0.3
CHD2-229ENST00000637789 ARIH1Q9Y4X5 557 aaPredicted RBP13.16□□□□□ -0.3
CHD2-229ENST00000637789 CACNA1AO00555 2505 aa13.16□□□□□ -0.3
CHD2-229ENST00000637789 UBXN2AP68543 259 aa13.15□□□□□ -0.3
CHD2-229ENST00000637789 GIGYF2Q6Y7W6 1299 aaKnown RBP13.15□□□□□ -0.3
CHD2-229ENST00000637789 APOBEC3FQ8IUX4 373 aaKnown RBP13.15□□□□□ -0.3
CHD2-229ENST00000637789 RAET1EQ8TD07 263 aa13.15□□□□□ -0.3
CHD2-229ENST00000637789 BRI3BPQ8WY22 251 aa13.15□□□□□ -0.3
CHD2-229ENST00000637789 CELF1Q92879 486 aaKnown RBP13.15□□□□□ -0.3
CHD2-229ENST00000637789 COL2A1P02458 1487 aaPredicted RBP13.15□□□□□ -0.3
CHD2-229ENST00000637789 CDH23Q9H251 3354 aa13.15□□□□□ -0.3
CHD2-229ENST00000637789 UNCXA6NJT0 531 aa13.14□□□□□ -0.31
CHD2-229ENST00000637789 PPP1R12BO60237 982 aaPredicted RBP13.14□□□□□ -0.31
CHD2-229ENST00000637789 TFRCP02786 760 aaKnown RBP13.14□□□□□ -0.31
CHD2-229ENST00000637789 CTGFP29279 349 aa13.14□□□□□ -0.31
CHD2-229ENST00000637789 MORC1Q86VD1 984 aa13.14□□□□□ -0.31
CHD2-229ENST00000637789 FAM43AQ8N2R8 423 aa13.14□□□□□ -0.31
CHD2-229ENST00000637789 GAS2L2Q8NHY3 880 aa13.14□□□□□ -0.31
CHD2-229ENST00000637789 CNKSR2Q8WXI2 1034 aa13.14□□□□□ -0.31
CHD2-229ENST00000637789 TRIM47Q96LD4 638 aa13.14□□□□□ -0.31
CHD2-229ENST00000637789 COL4A1P02462 1669 aa13.14□□□□□ -0.31
CHD2-229ENST00000637789 TLR2O60603 784 aa13.13□□□□□ -0.31
CHD2-229ENST00000637789 ALYREFQ86V81 257 aaKnown RBP13.13□□□□□ -0.31
CHD2-229ENST00000637789 MYLIPQ8WY64 445 aa13.13□□□□□ -0.31
CHD2-229ENST00000637789 RRP7AQ9Y3A4 280 aaKnown RBP13.13□□□□□ -0.31
CHD2-229ENST00000637789 COL1A1P02452 1464 aaPredicted RBP13.12□□□□□ -0.31
CHD2-229ENST00000637789 CCL15-CCL14A0A0B4J2E2 113 aa13.12□□□□□ -0.31
CHD2-229ENST00000637789 USP17L3A6NCW0 530 aa13.12□□□□□ -0.31
CHD2-229ENST00000637789 USP17L4A6NCW7 530 aa13.12□□□□□ -0.31
CHD2-229ENST00000637789 MYL6BP14649 208 aa13.12□□□□□ -0.31
CHD2-229ENST00000637789 OSBPP22059 807 aa13.12□□□□□ -0.31
CHD2-229ENST00000637789 CCL15Q16663 113 aa13.12□□□□□ -0.31
CHD2-229ENST00000637789 USP17L1Q7RTZ2 530 aa13.12□□□□□ -0.31
CHD2-229ENST00000637789 NECAB2Q7Z6G3 386 aa13.12□□□□□ -0.31
CHD2-229ENST00000637789 DIS3LQ8TF46 1054 aaKnown RBP13.12□□□□□ -0.31
CHD2-229ENST00000637789 OPTNQ96CV9 577 aa13.12□□□□□ -0.31
CHD2-229ENST00000637789 DEFB129Q9H1M3 183 aa13.12□□□□□ -0.31
CHD2-229ENST00000637789 OGFOD1Q8N543 542 aa13.11□□□□□ -0.31
CHD2-229ENST00000637789 DEFB118Q96PH6 123 aa13.11□□□□□ -0.31
CHD2-229ENST00000637789 MXD3Q9BW11 206 aa13.11□□□□□ -0.31
CHD2-229ENST00000637789 MYPNQ86TC9 1320 aa13.11□□□□□ -0.31
CHD2-229ENST00000637789 UFL1O94874 794 aa13.1□□□□□ -0.31
CHD2-229ENST00000637789 PSMC4P43686 418 aa13.1□□□□□ -0.31
CHD2-229ENST00000637789 ANKRD13AQ8IZ07 590 aa13.1□□□□□ -0.31
CHD2-229ENST00000637789 PCGF6Q9BYE7 350 aa13.1□□□□□ -0.31
CHD2-229ENST00000637789 SEMA6BQ9H3T3 888 aa13.1□□□□□ -0.31
CHD2-229ENST00000637789 ELP3Q9H9T3 547 aa13.1□□□□□ -0.31
CHD2-229ENST00000637789 HCN4Q9Y3Q4 1203 aa13.1□□□□□ -0.31
CHD2-229ENST00000637789 PIEZO1Q92508 2521 aa13.1□□□□□ -0.31
CHD2-229ENST00000637789 FAM205AQ6ZU69 1335 aa13.1□□□□□ -0.31
CHD2-229ENST00000637789 USP2O75604 605 aaPredicted RBP13.09□□□□□ -0.31
CHD2-229ENST00000637789 WDHD1O75717 1129 aaPredicted RBP13.09□□□□□ -0.31
CHD2-229ENST00000637789 FOSL2P15408 326 aa13.09□□□□□ -0.31
CHD2-229ENST00000637789 CAPN2P17655 700 aa13.09□□□□□ -0.31
CHD2-229ENST00000637789 HOXD10P28358 340 aa13.09□□□□□ -0.31
CHD2-229ENST00000637789 IREB2P48200 963 aaKnown RBP13.09□□□□□ -0.31
CHD2-229ENST00000637789 C1QTNF1Q9BXJ1 281 aa13.08□□□□□ -0.32
CHD2-229ENST00000637789 CRISPLD2Q9H0B8 497 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms