RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 USP17L3A6NCW0 530 aa21.2■□□□□ 0.98
LIN28B-202ENST00000635857 USP17L4A6NCW7 530 aa21.2■□□□□ 0.98
LIN28B-202ENST00000635857 SRGAP3O43295 1099 aa21.2■□□□□ 0.98
LIN28B-202ENST00000635857 LRRC24Q50LG9 513 aa21.2■□□□□ 0.98
LIN28B-202ENST00000635857 USP50Q70EL3 339 aaPredicted RBP21.2■□□□□ 0.98
LIN28B-202ENST00000635857 USP17L1Q7RTZ2 530 aa21.2■□□□□ 0.98
LIN28B-202ENST00000635857 DPF2Q92785 391 aa21.2■□□□□ 0.98
LIN28B-202ENST00000635857 RIPOR2Q9Y4F9 1068 aa21.2■□□□□ 0.98
LIN28B-202ENST00000635857 SCN9AQ15858 1988 aa21.19■□□□□ 0.98
LIN28B-202ENST00000635857 WTIPA6NIX2 430 aaPredicted RBP21.19■□□□□ 0.98
LIN28B-202ENST00000635857 EYA2O00167 538 aa21.19■□□□□ 0.98
LIN28B-202ENST00000635857 HSPA6P17066 643 aa21.19■□□□□ 0.98
LIN28B-202ENST00000635857 C15orf52Q6ZUT6 534 aaKnown RBP21.19■□□□□ 0.98
LIN28B-202ENST00000635857 MICALL2Q8IY33 904 aa21.19■□□□□ 0.98
LIN28B-202ENST00000635857 SIL1Q9H173 461 aa21.19■□□□□ 0.98
LIN28B-202ENST00000635857 CNOT7Q9UIV1 285 aaKnown RBP21.19■□□□□ 0.98
LIN28B-202ENST00000635857 ZBTB12Q9Y330 459 aaPredicted RBP21.19■□□□□ 0.98
LIN28B-202ENST00000635857 VIL1P09327 827 aaKnown RBP21.18■□□□□ 0.98
LIN28B-202ENST00000635857 KLRK1P26718 216 aa21.18■□□□□ 0.98
LIN28B-202ENST00000635857 PTPN12Q05209 780 aaKnown RBP21.18■□□□□ 0.98
LIN28B-202ENST00000635857 TXNRD3Q86VQ6 643 aa21.18■□□□□ 0.98
LIN28B-202ENST00000635857 VPS37DQ86XT2 251 aa21.18■□□□□ 0.98
LIN28B-202ENST00000635857 AGBL3Q8NEM8 1001 aa21.18■□□□□ 0.98
LIN28B-202ENST00000635857 KCNQ5Q9NR82 932 aa21.18■□□□□ 0.98
LIN28B-202ENST00000635857 MYO3BQ8WXR4 1341 aa21.18■□□□□ 0.98
LIN28B-202ENST00000635857 SNAP23O00161 211 aa21.17■□□□□ 0.98
LIN28B-202ENST00000635857 PDE8BO95263 885 aa21.17■□□□□ 0.98
LIN28B-202ENST00000635857 RFX5P48382 616 aaPredicted RBP21.17■□□□□ 0.98
LIN28B-202ENST00000635857 RSBN1LQ6PCB5 846 aaPredicted RBP21.17■□□□□ 0.98
LIN28B-202ENST00000635857 CHMP4BQ9H444 224 aaKnown RBP21.17■□□□□ 0.98
LIN28B-202ENST00000635857 CIAO1O76071 339 aa21.16■□□□□ 0.98
LIN28B-202ENST00000635857 IFIT1P09914 478 aaKnown RBP21.16■□□□□ 0.98
LIN28B-202ENST00000635857 POTEIP0CG38 1075 aa21.16■□□□□ 0.98
LIN28B-202ENST00000635857 POTEJP0CG39 1038 aa21.16■□□□□ 0.98
LIN28B-202ENST00000635857 RLBP1P12271 317 aa21.16■□□□□ 0.98
LIN28B-202ENST00000635857 IL15P40933 162 aaPredicted RBP21.16■□□□□ 0.98
LIN28B-202ENST00000635857 MTX1Q13505 466 aa21.16■□□□□ 0.98
LIN28B-202ENST00000635857 PUM3Q15397 648 aaKnown RBP21.16■□□□□ 0.98
LIN28B-202ENST00000635857 CAVIN4Q5BKX8 364 aa21.16■□□□□ 0.98
LIN28B-202ENST00000635857 STRIP1Q5VSL9 837 aa21.16■□□□□ 0.98
LIN28B-202ENST00000635857 PANK1Q8TE04 598 aa21.16■□□□□ 0.98
LIN28B-202ENST00000635857 CD209Q9NNX6 404 aa21.16■□□□□ 0.98
LIN28B-202ENST00000635857 APLP1P51693 650 aa21.15■□□□□ 0.98
LIN28B-202ENST00000635857 TTLL5Q6EMB2 1281 aa21.15■□□□□ 0.98
LIN28B-202ENST00000635857 COPRSQ9NQ92 184 aa21.15■□□□□ 0.98
LIN28B-202ENST00000635857 CEP126Q9P2H0 1117 aa21.15■□□□□ 0.98
LIN28B-202ENST00000635857 ADAMTSL1Q8N6G6 1762 aa21.15■□□□□ 0.98
LIN28B-202ENST00000635857 ZNF609O15014 1411 aa21.14■□□□□ 0.98
LIN28B-202ENST00000635857 SLC5A1P13866 664 aa21.14■□□□□ 0.97
LIN28B-202ENST00000635857 HIBADHP31937 336 aaKnown RBP21.14■□□□□ 0.97
LIN28B-202ENST00000635857 GTF2IP78347 998 aa21.14■□□□□ 0.97
LIN28B-202ENST00000635857 OGFOD1Q8N543 542 aa21.14■□□□□ 0.97
LIN28B-202ENST00000635857 DDX19BQ9UMR2 479 aa21.14■□□□□ 0.97
LIN28B-202ENST00000635857 FRAT2O75474 233 aaPredicted RBP21.13■□□□□ 0.97
LIN28B-202ENST00000635857 MVPQ14764 893 aaKnown RBP21.13■□□□□ 0.97
LIN28B-202ENST00000635857 PA2G4Q9UQ80 394 aaKnown RBP21.13■□□□□ 0.97
LIN28B-202ENST00000635857 USP17L8P0C7I0 530 aa21.12■□□□□ 0.97
LIN28B-202ENST00000635857 IL1R1P14778 569 aa21.12■□□□□ 0.97
LIN28B-202ENST00000635857 GYG1P46976 350 aa21.12■□□□□ 0.97
LIN28B-202ENST00000635857 DACT2Q5SW24 774 aa21.12■□□□□ 0.97
LIN28B-202ENST00000635857 MAP1SQ66K74 1059 aaPredicted RBP21.12■□□□□ 0.97
LIN28B-202ENST00000635857 VGLL2Q8N8G2 317 aa21.12■□□□□ 0.97
LIN28B-202ENST00000635857 HDAC9Q9UKV0 1011 aa21.12■□□□□ 0.97
LIN28B-202ENST00000635857 IRS2Q9Y4H2 1338 aa21.11■□□□□ 0.97
LIN28B-202ENST00000635857 ZBTB7BO15156 539 aaPredicted RBP21.11■□□□□ 0.97
LIN28B-202ENST00000635857 G3BP1Q13283 466 aaKnown RBP eCLIP21.11■□□□□ 0.97
LIN28B-202ENST00000635857 KIF4BQ2VIQ3 1234 aa21.11■□□□□ 0.97
LIN28B-202ENST00000635857 TBC1D10BQ4KMP7 808 aaPredicted RBP21.11■□□□□ 0.97
LIN28B-202ENST00000635857 RBM26Q5T8P6 1007 aaKnown RBP21.11■□□□□ 0.97
LIN28B-202ENST00000635857 ATG9AQ7Z3C6 839 aa21.11■□□□□ 0.97
LIN28B-202ENST00000635857 LPIN2Q92539 896 aa21.11■□□□□ 0.97
LIN28B-202ENST00000635857 C1orf115Q9H7X2 142 aa21.11■□□□□ 0.97
LIN28B-202ENST00000635857 MMP14P50281 582 aa21.1■□□□□ 0.97
LIN28B-202ENST00000635857 OS9Q13438 667 aaPredicted RBP21.1■□□□□ 0.97
LIN28B-202ENST00000635857 ATP2B3Q16720 1220 aa21.1■□□□□ 0.97
LIN28B-202ENST00000635857 SAMD7Q7Z3H4 446 aa21.1■□□□□ 0.97
LIN28B-202ENST00000635857 CNTROBQ8N137 903 aa21.1■□□□□ 0.97
LIN28B-202ENST00000635857 TRPM4Q8TD43 1214 aa21.1■□□□□ 0.97
LIN28B-202ENST00000635857 ZC3H15Q8WU90 426 aaKnown RBP21.1■□□□□ 0.97
LIN28B-202ENST00000635857 COG6Q9Y2V7 657 aa21.1■□□□□ 0.97
LIN28B-202ENST00000635857 PNMA6EA0A0J9YXQ4 647 aa21.09■□□□□ 0.97
LIN28B-202ENST00000635857 SHTN1A0MZ66 631 aa21.09■□□□□ 0.97
LIN28B-202ENST00000635857 PDE3AQ14432 1141 aa21.09■□□□□ 0.97
LIN28B-202ENST00000635857 FAM84BQ96KN1 310 aaPredicted RBP21.09■□□□□ 0.97
LIN28B-202ENST00000635857 AKAP2Q9Y2D5 859 aa21.09■□□□□ 0.97
LIN28B-202ENST00000635857 SASH1O94885 1247 aa21.08■□□□□ 0.97
LIN28B-202ENST00000635857 ZNF646O15015 1829 aaPredicted RBP21.08■□□□□ 0.96
LIN28B-202ENST00000635857 MYH13Q9UKX3 1938 aa21.08■□□□□ 0.96
LIN28B-202ENST00000635857 FGFR2P21802 821 aa21.07■□□□□ 0.96
LIN28B-202ENST00000635857 ZNF280AP59817 542 aaPredicted RBP21.07■□□□□ 0.96
LIN28B-202ENST00000635857 ATP8B2P98198 1209 aa21.07■□□□□ 0.96
LIN28B-202ENST00000635857 TDRD7Q8NHU6 1098 aaKnown RBP21.07■□□□□ 0.96
LIN28B-202ENST00000635857 DCPSQ96C86 337 aaKnown RBP21.07■□□□□ 0.96
LIN28B-202ENST00000635857 GMLQ99445 158 aa21.07■□□□□ 0.96
LIN28B-202ENST00000635857 MYOZ2Q9NPC6 264 aa21.07■□□□□ 0.96
LIN28B-202ENST00000635857 GNL3LQ9NVN8 582 aaKnown RBP21.07■□□□□ 0.96
LIN28B-202ENST00000635857 FKBP1AP62942 108 aaKnown RBP21.06■□□□□ 0.96
LIN28B-202ENST00000635857 KIAA0825Q8IV33 1275 aa21.06■□□□□ 0.96
LIN28B-202ENST00000635857 MXD3Q9BW11 206 aa21.06■□□□□ 0.96
LIN28B-202ENST00000635857 ARAP2Q8WZ64 1704 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms