RNA–Protein interactions for RNA: ENST00000630866.1

SPTAN1-223, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5 BASIC

Gene SPTAN1, Length 7,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-223	ENST00000630866	KIF4A	O95239	1232 aa		9.85	□□□□□ -0.83
SPTAN1-223	ENST00000630866	WDR66	Q8TBY9	1149 aa		9.85	□□□□□ -0.83
SPTAN1-223	ENST00000630866	MMRN2	Q9H8L6	949 aa		9.85	□□□□□ -0.83
SPTAN1-223	ENST00000630866	EXOC1	Q9NV70	894 aa		9.85	□□□□□ -0.83
SPTAN1-223	ENST00000630866	SMCR8	Q8TEV9	937 aa	Predicted RBP	9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	RBM27	Q9P2N5	1060 aa	Known RBP	9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	CSAD	Q9Y600	493 aa		9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	CEP170	Q5SW79	1584 aa		9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	STAMBP	O95630	424 aa		9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	DLGAP5	Q15398	846 aa		9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	KANK3	Q6NY19	840 aa		9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	CEP63	Q96MT8	703 aa		9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	SBNO1	A3KN83	1393 aa		9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	PABPN1L	A6NDY0	278 aa	Known RBP	9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	FAM114A1	Q8IWE2	563 aa		9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	SLC52A2	Q9HAB3	445 aa		9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866		A0A1W2PP64	1363 aa		9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	RTL9	Q8NET4	1388 aa		9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	FAM196A	Q6ZSG2	479 aa		9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	IMPG2	Q9BZV3	1241 aa		9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	RBM25	P49756	843 aa	Known RBP	9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	PUM3	Q15397	648 aa	Known RBP	9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	FAM212A	Q96EL1	285 aa		9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	ZBTB21	Q9ULJ3	1066 aa		9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	PRAG1	Q86YV5	1406 aa		9.84	□□□□□ -0.83
SPTAN1-223	ENST00000630866	ATP8B2	P98198	1209 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	PANK2	Q9BZ23	570 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	NEO1	Q92859	1461 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	GOLGA6L10	A0A0M3HER8	536 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	TRIM37	O94972	964 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	BMP15	O95972	392 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	FSIP1	Q8NA03	581 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	BICC1	Q9H694	974 aa	Known RBP	9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	YEATS2	Q9ULM3	1422 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	KDM6B	O15054	1643 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	PPFIA3	O75145	1194 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	KRT13	P13646	458 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	TFCP2	Q12800	502 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	A1BG	P04217	495 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	CALML3	P27482	149 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	GRIPAP1	Q4V328	841 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	HOOK3	Q86VS8	718 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	PKNOX2	Q96KN3	472 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	ALG1	Q9BT22	464 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	TMEM2	Q9UHN6	1383 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	CTAGE5	O15320	804 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	IRX3	P78415	501 aa	Predicted RBP	9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	CCDC91	Q7Z6B0	441 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	ZNF526	Q8TF50	670 aa	Predicted RBP	9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	CERS3	Q8IU89	383 aa		9.83	□□□□□ -0.84
SPTAN1-223	ENST00000630866	GJB2	P29033	226 aa		9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	ZYX	Q15942	572 aa	Known RBP	9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	C2CD5	Q86YS7	1000 aa		9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	NUP88	Q99567	741 aa	Predicted RBP	9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	SOS1	Q07889	1333 aa	Predicted RBP	9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	RNF113A	O15541	343 aa	Known RBP	9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	STAT6	P42226	847 aa		9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	DNAJC10	Q8IXB1	793 aa		9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	BACH2	Q9BYV9	841 aa		9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	PARP1	P09874	1014 aa	Known RBP	9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	TNNT1	P13805	278 aa		9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	GNA11	P29992	359 aa		9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	C20orf194	Q5TEA3	1177 aa		9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	TNPO1	Q92973	898 aa	Known RBP	9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	BRF1	Q92994	677 aa		9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	DCPS	Q96C86	337 aa	Known RBP	9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	EDC4	Q6P2E9	1401 aa	Known RBP	9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	COL17A1	Q9UMD9	1497 aa	Predicted RBP	9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	TNFAIP1	Q13829	316 aa		9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	USP48	Q86UV5	1035 aa		9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	SPATA24	Q86W54	205 aa		9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	DDX23	Q9BUQ8	820 aa	Known RBP	9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	SBNO2	Q9Y2G9	1366 aa		9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	NOP56	O00567	594 aa	Known RBP	9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	TTC22	Q5TAA0	569 aa		9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	LRRC45	Q96CN5	670 aa		9.82	□□□□□ -0.84
SPTAN1-223	ENST00000630866	PIK3C2G	O75747	1445 aa		9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	GSTTP1	A0A1W2PQM5	241 aa		9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	KRT27	Q7Z3Y8	459 aa		9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	LRRC2	Q9BYS8	371 aa		9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	SPC25	Q9HBM1	224 aa		9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	ERVV-2	B6SEH9	535 aa		9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	CCDC172	P0C7W6	258 aa		9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	SULF1	Q8IWU6	871 aa		9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	MRPL50	Q8N5N7	158 aa	Known RBP	9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	TBC1D5	Q92609	795 aa		9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	METTL22	Q9BUU2	404 aa	Predicted RBP	9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	USO1	O60763	962 aa	Known RBP	9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	SLC5A4	Q9NY91	659 aa		9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	TCP10	Q12799	353 aa		9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	RMND1	Q9NWS8	449 aa		9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	TMEM94	Q12767	1356 aa		9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	SSX2IP	Q9Y2D8	614 aa		9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	ZBED4	O75132	1171 aa		9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	EIF3J	O75822	258 aa	Known RBP	9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	CCDC117	Q8IWD4	279 aa	Predicted RBP	9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	NLGN1	Q8N2Q7	840 aa		9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	CNKSR1	Q969H4	720 aa		9.81	□□□□□ -0.84
SPTAN1-223	ENST00000630866	HOMER2	Q9NSB8	354 aa		9.81	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms