RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 KIF2AO00139 706 aaPredicted RBP21.27■□□□□ 0.99
GABPB1-212ENST00000615671 IGHDP01880 384 aa21.27■□□□□ 0.99
GABPB1-212ENST00000615671 RAB3IL1Q8TBN0 382 aa21.26■□□□□ 0.99
GABPB1-212ENST00000615671 LRRC45Q96CN5 670 aa21.26■□□□□ 0.99
GABPB1-212ENST00000615671 GRM8O00222 908 aa21.26■□□□□ 0.99
GABPB1-212ENST00000615671 IL2RBP14784 551 aa21.26■□□□□ 0.99
GABPB1-212ENST00000615671 FNBP4Q8N3X1 1017 aaPredicted RBP21.26■□□□□ 0.99
GABPB1-212ENST00000615671 HMG20BQ9P0W2 317 aa21.26■□□□□ 0.99
GABPB1-212ENST00000615671 IQCGQ9H095 443 aaKnown RBP21.25■□□□□ 0.99
GABPB1-212ENST00000615671 STX17P56962 302 aa21.25■□□□□ 0.99
GABPB1-212ENST00000615671 CNNM2Q9H8M5 875 aa21.25■□□□□ 0.99
GABPB1-212ENST00000615671 NOD1Q9Y239 953 aa21.25■□□□□ 0.99
GABPB1-212ENST00000615671 LDHBP07195 334 aaKnown RBP21.25■□□□□ 0.99
GABPB1-212ENST00000615671 CCDC172P0C7W6 258 aa21.25■□□□□ 0.99
GABPB1-212ENST00000615671 FAM170AA1A519 330 aa21.24■□□□□ 0.99
GABPB1-212ENST00000615671 TFCP2Q12800 502 aa21.24■□□□□ 0.99
GABPB1-212ENST00000615671 ANO6Q4KMQ2 910 aa21.24■□□□□ 0.99
GABPB1-212ENST00000615671 PYM1Q9BRP8 204 aaKnown RBP21.24■□□□□ 0.99
GABPB1-212ENST00000615671 TNRQ92752 1358 aa21.24■□□□□ 0.99
GABPB1-212ENST00000615671 SDSP20132 328 aa21.24■□□□□ 0.99
GABPB1-212ENST00000615671 GTF2F1P35269 517 aaKnown RBP eCLIP21.24■□□□□ 0.99
GABPB1-212ENST00000615671 PPIP5K1Q6PFW1 1433 aa21.24■□□□□ 0.99
GABPB1-212ENST00000615671 CAPZA3Q96KX2 299 aa21.24■□□□□ 0.99
GABPB1-212ENST00000615671 WDR7Q9Y4E6 1490 aa21.24■□□□□ 0.99
GABPB1-212ENST00000615671 DISP3Q9P2K9 1392 aa21.24■□□□□ 0.99
GABPB1-212ENST00000615671 SH3BP5O60239 455 aa21.24■□□□□ 0.99
GABPB1-212ENST00000615671 HSF2BPO75031 334 aa21.24■□□□□ 0.99
GABPB1-212ENST00000615671 PSMC4P43686 418 aa21.24■□□□□ 0.99
GABPB1-212ENST00000615671 APOBRQ0VD83 1088 aa21.24■□□□□ 0.99
GABPB1-212ENST00000615671 USP37Q86T82 979 aa21.24■□□□□ 0.99
GABPB1-212ENST00000615671 CEP112Q8N8E3 955 aa21.24■□□□□ 0.99
GABPB1-212ENST00000615671 DCAF17Q5H9S7 520 aaPredicted RBP21.24■□□□□ 0.99
GABPB1-212ENST00000615671 IFI16Q16666 785 aaKnown RBP21.23■□□□□ 0.99
GABPB1-212ENST00000615671 RBM17Q96I25 401 aaKnown RBP21.23■□□□□ 0.99
GABPB1-212ENST00000615671 PTPN23Q9H3S7 1636 aa21.23■□□□□ 0.99
GABPB1-212ENST00000615671 MAEAQ7L5Y9 396 aa21.23■□□□□ 0.99
GABPB1-212ENST00000615671 KRT2P35908 639 aa21.23■□□□□ 0.99
GABPB1-212ENST00000615671 DDX39AO00148 427 aaKnown RBP21.22■□□□□ 0.99
GABPB1-212ENST00000615671 KRT5P13647 590 aa21.22■□□□□ 0.99
GABPB1-212ENST00000615671 CEP135Q66GS9 1140 aa21.22■□□□□ 0.99
GABPB1-212ENST00000615671 NPHP3Q7Z494 1330 aa21.22■□□□□ 0.99
GABPB1-212ENST00000615671 GSDMDP57764 484 aa21.22■□□□□ 0.99
GABPB1-212ENST00000615671 TRAPPC3LQ5T215 181 aa21.22■□□□□ 0.99
GABPB1-212ENST00000615671 BTG4Q9NY30 223 aa21.22■□□□□ 0.99
GABPB1-212ENST00000615671 HCLS1P14317 486 aaPredicted RBP21.22■□□□□ 0.99
GABPB1-212ENST00000615671 AOPEPQ8N6M6 819 aa21.22■□□□□ 0.99
GABPB1-212ENST00000615671 TMX3Q96JJ7 454 aa21.22■□□□□ 0.99
GABPB1-212ENST00000615671 UFL1O94874 794 aa21.21■□□□□ 0.99
GABPB1-212ENST00000615671 RASA3Q14644 834 aa21.21■□□□□ 0.99
GABPB1-212ENST00000615671 PCF11O94913 1555 aaKnown RBP21.21■□□□□ 0.99
GABPB1-212ENST00000615671 FCHSD1Q86WN1 690 aa21.21■□□□□ 0.99
GABPB1-212ENST00000615671 IQGAP2Q13576 1575 aa21.21■□□□□ 0.99
GABPB1-212ENST00000615671 KRT9P35527 623 aa21.21■□□□□ 0.99
GABPB1-212ENST00000615671 CCDC155Q8N6L0 562 aa21.2■□□□□ 0.99
GABPB1-212ENST00000615671 C8orf58Q8NAV2 365 aa21.2■□□□□ 0.99
GABPB1-212ENST00000615671 PICK1Q9NRD5 415 aa21.2■□□□□ 0.99
GABPB1-212ENST00000615671 ZSCAN22P10073 491 aaPredicted RBP21.2■□□□□ 0.98
GABPB1-212ENST00000615671 AKAP4Q5JQC9 854 aa21.2■□□□□ 0.98
GABPB1-212ENST00000615671 EAPPQ56P03 285 aaPredicted RBP21.2■□□□□ 0.98
GABPB1-212ENST00000615671 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.2■□□□□ 0.98
GABPB1-212ENST00000615671 RAPGEF1Q13905 1077 aa21.2■□□□□ 0.98
GABPB1-212ENST00000615671 EP400NLQ6ZTU2 488 aa21.2■□□□□ 0.98
GABPB1-212ENST00000615671 SREK1Q8WXA9 508 aaKnown RBP21.2■□□□□ 0.98
GABPB1-212ENST00000615671 DENND4BO75064 1496 aaPredicted RBP21.2■□□□□ 0.98
GABPB1-212ENST00000615671 LMTK3Q96Q04 1460 aa21.2■□□□□ 0.98
GABPB1-212ENST00000615671 CGNQ9P2M7 1197 aaKnown RBP21.2■□□□□ 0.98
GABPB1-212ENST00000615671 KRT79Q5XKE5 535 aa21.19■□□□□ 0.98
GABPB1-212ENST00000615671 RNF34Q969K3 372 aa21.19■□□□□ 0.98
GABPB1-212ENST00000615671 SELENOSQ9BQE4 189 aa21.19■□□□□ 0.98
GABPB1-212ENST00000615671 UBE2HP62256 183 aa21.19■□□□□ 0.98
GABPB1-212ENST00000615671 MYCLP12524 364 aaPredicted RBP21.19■□□□□ 0.98
GABPB1-212ENST00000615671 CKAP4Q07065 602 aaKnown RBP21.19■□□□□ 0.98
GABPB1-212ENST00000615671 CCDC114Q96M63 670 aa21.19■□□□□ 0.98
GABPB1-212ENST00000615671 TTC12Q9H892 705 aaPredicted RBP21.19■□□□□ 0.98
GABPB1-212ENST00000615671 ZFYP08048 801 aaPredicted RBP21.19■□□□□ 0.98
GABPB1-212ENST00000615671 IL15P40933 162 aaPredicted RBP21.19■□□□□ 0.98
GABPB1-212ENST00000615671 MTHFSDQ2M296 383 aaKnown RBP21.19■□□□□ 0.98
GABPB1-212ENST00000615671 MICALCLQ6ZW33 695 aa21.19■□□□□ 0.98
GABPB1-212ENST00000615671 FANCAO15360 1455 aa21.19■□□□□ 0.98
GABPB1-212ENST00000615671 RFX1P22670 979 aa21.18■□□□□ 0.98
GABPB1-212ENST00000615671 KRT24Q2M2I5 525 aa21.18■□□□□ 0.98
GABPB1-212ENST00000615671 CCDC25Q86WR0 208 aa21.18■□□□□ 0.98
GABPB1-212ENST00000615671 TMTC2Q8N394 836 aa21.18■□□□□ 0.98
GABPB1-212ENST00000615671 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.18■□□□□ 0.98
GABPB1-212ENST00000615671 KSR2Q6VAB6 950 aa21.18■□□□□ 0.98
GABPB1-212ENST00000615671 ZSCAN16Q9H4T2 348 aaPredicted RBP21.18■□□□□ 0.98
GABPB1-212ENST00000615671 TMOD4Q9NZQ9 345 aa21.18■□□□□ 0.98
GABPB1-212ENST00000615671 B4DLN1 442 aa21.18■□□□□ 0.98
GABPB1-212ENST00000615671 MRPL12P52815 198 aaKnown RBP21.18■□□□□ 0.98
GABPB1-212ENST00000615671 GNAQP50148 359 aa21.18■□□□□ 0.98
GABPB1-212ENST00000615671 UBXN1Q04323 297 aa21.18■□□□□ 0.98
GABPB1-212ENST00000615671 ZSCAN23Q3MJ62 389 aa21.18■□□□□ 0.98
GABPB1-212ENST00000615671 BBXQ8WY36 941 aaPredicted RBP21.18■□□□□ 0.98
GABPB1-212ENST00000615671 EYA3Q99504 573 aa21.17■□□□□ 0.98
GABPB1-212ENST00000615671 SELENOOQ9BVL4 669 aa21.17■□□□□ 0.98
GABPB1-212ENST00000615671 DNAJC25Q9H1X3 360 aa21.17■□□□□ 0.98
GABPB1-212ENST00000615671 PSMA7O14818 248 aa21.17■□□□□ 0.98
GABPB1-212ENST00000615671 SORBS3O60504 671 aa21.17■□□□□ 0.98
GABPB1-212ENST00000615671 USP48Q86UV5 1035 aa21.17■□□□□ 0.98
GABPB1-212ENST00000615671 CCDC169A6NNP5 214 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms