RNA–Protein interactions for RNA: ENST00000615513.4

CDKN1A-208, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN1A, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-208ENST00000615513 PDE8AO60658 829 aa17.45■□□□□ 0.38
CDKN1A-208ENST00000615513 SMARCC2Q8TAQ2 1214 aa17.45■□□□□ 0.38
CDKN1A-208ENST00000615513 AK7Q96M32 723 aa17.45■□□□□ 0.38
CDKN1A-208ENST00000615513 CCDC85AQ96PX6 553 aaPredicted RBP17.45■□□□□ 0.38
CDKN1A-208ENST00000615513 GREM2Q9H772 168 aa17.45■□□□□ 0.38
CDKN1A-208ENST00000615513 DTNBO60941 627 aa17.44■□□□□ 0.38
CDKN1A-208ENST00000615513 APPBP2Q92624 585 aa17.44■□□□□ 0.38
CDKN1A-208ENST00000615513 WNK3Q9BYP7 1800 aa17.44■□□□□ 0.38
CDKN1A-208ENST00000615513 TRMT112Q9UI30 125 aaKnown RBP17.44■□□□□ 0.38
CDKN1A-208ENST00000615513 THRAP3Q9Y2W1 955 aaKnown RBP17.44■□□□□ 0.38
CDKN1A-208ENST00000615513 SCRN1Q12765 414 aa17.44■□□□□ 0.38
CDKN1A-208ENST00000615513 DZIP3Q86Y13 1208 aaKnown RBP17.44■□□□□ 0.38
CDKN1A-208ENST00000615513 SYNE4Q8N205 404 aa17.44■□□□□ 0.38
CDKN1A-208ENST00000615513 SYTL4Q96C24 671 aaPredicted RBP17.44■□□□□ 0.38
CDKN1A-208ENST00000615513 HMGN5P82970 282 aaKnown RBP17.43■□□□□ 0.38
CDKN1A-208ENST00000615513 TTC6Q86TZ1 520 aa17.43■□□□□ 0.38
CDKN1A-208ENST00000615513 FERMT3Q86UX7 667 aa17.43■□□□□ 0.38
CDKN1A-208ENST00000615513 ZNF34Q8IZ26 560 aa17.43■□□□□ 0.38
CDKN1A-208ENST00000615513 RNF214Q8ND24 703 aa17.43■□□□□ 0.38
CDKN1A-208ENST00000615513 ZSCAN16Q9H4T2 348 aaPredicted RBP17.43■□□□□ 0.38
CDKN1A-208ENST00000615513 KIF3AQ9Y496 699 aa17.43■□□□□ 0.38
CDKN1A-208ENST00000615513 JAK2O60674 1132 aa17.42■□□□□ 0.38
CDKN1A-208ENST00000615513 ZAP70P43403 619 aa17.42■□□□□ 0.38
CDKN1A-208ENST00000615513 SCARF1Q14162 830 aa17.42■□□□□ 0.38
CDKN1A-208ENST00000615513 VGLL2Q8N8G2 317 aa17.42■□□□□ 0.38
CDKN1A-208ENST00000615513 CNNM1Q9NRU3 951 aa17.42■□□□□ 0.38
CDKN1A-208ENST00000615513 WASHC4Q2M389 1173 aa17.42■□□□□ 0.38
CDKN1A-208ENST00000615513 ZSCAN25Q6NSZ9 544 aa17.42■□□□□ 0.38
CDKN1A-208ENST00000615513 ZNF274Q96GC6 653 aaPredicted RBP17.42■□□□□ 0.38
CDKN1A-208ENST00000615513 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.42■□□□□ 0.38
CDKN1A-208ENST00000615513 TTF1Q15361 905 aaPredicted RBP17.41■□□□□ 0.38
CDKN1A-208ENST00000615513 IMMTQ16891 758 aaKnown RBP17.41■□□□□ 0.38
CDKN1A-208ENST00000615513 LRRC2Q9BYS8 371 aa17.41■□□□□ 0.38
CDKN1A-208ENST00000615513 LAMA4Q16363 1823 aa17.41■□□□□ 0.38
CDKN1A-208ENST00000615513 MYH3P11055 1940 aa17.41■□□□□ 0.38
CDKN1A-208ENST00000615513 PDE8BO95263 885 aa17.41■□□□□ 0.38
CDKN1A-208ENST00000615513 EIF5P55010 431 aaKnown RBP17.41■□□□□ 0.38
CDKN1A-208ENST00000615513 EVCP57679 992 aa17.41■□□□□ 0.38
CDKN1A-208ENST00000615513 RESTQ13127 1097 aa17.41■□□□□ 0.38
CDKN1A-208ENST00000615513 NSUN7Q8NE18 718 aaKnown RBP17.41■□□□□ 0.38
CDKN1A-208ENST00000615513 SPATA31A1Q5TZJ5 1347 aa17.4■□□□□ 0.38
CDKN1A-208ENST00000615513 UBN2Q6ZU65 1347 aa17.4■□□□□ 0.38
CDKN1A-208ENST00000615513 NUP98P52948 1817 aa17.4■□□□□ 0.38
CDKN1A-208ENST00000615513 FOXP2O15409 715 aa17.4■□□□□ 0.38
CDKN1A-208ENST00000615513 NAA16Q6N069 864 aaPredicted RBP17.4■□□□□ 0.38
CDKN1A-208ENST00000615513 FUCA2Q9BTY2 467 aa17.4■□□□□ 0.38
CDKN1A-208ENST00000615513 NOL7Q9UMY1 257 aaKnown RBP17.4■□□□□ 0.38
CDKN1A-208ENST00000615513 H3BQV1 296 aa17.39■□□□□ 0.38
CDKN1A-208ENST00000615513 MSNP26038 577 aaKnown RBP17.39■□□□□ 0.38
CDKN1A-208ENST00000615513 MCAMP43121 646 aa17.39■□□□□ 0.38
CDKN1A-208ENST00000615513 APOBRQ0VD83 1088 aa17.39■□□□□ 0.38
CDKN1A-208ENST00000615513 IFFO2Q5TF58 517 aa17.39■□□□□ 0.38
CDKN1A-208ENST00000615513 SPATA32Q96LK8 384 aa17.39■□□□□ 0.38
CDKN1A-208ENST00000615513 TBC1D2BQ9UPU7 963 aa17.39■□□□□ 0.38
CDKN1A-208ENST00000615513 DOT1LQ8TEK3 1739 aa17.39■□□□□ 0.37
CDKN1A-208ENST00000615513 LRP5O75197 1615 aa17.39■□□□□ 0.37
CDKN1A-208ENST00000615513 DDB1Q16531 1140 aa17.39■□□□□ 0.37
CDKN1A-208ENST00000615513 TTLL5Q6EMB2 1281 aa17.39■□□□□ 0.37
CDKN1A-208ENST00000615513 FAM173BQ6P4H8 233 aa17.39■□□□□ 0.37
CDKN1A-208ENST00000615513 LEO1Q8WVC0 666 aaPredicted RBP17.39■□□□□ 0.37
CDKN1A-208ENST00000615513 CCDC39Q9UFE4 941 aa17.39■□□□□ 0.37
CDKN1A-208ENST00000615513 MROH5Q6ZUA9 1318 aa17.38■□□□□ 0.37
CDKN1A-208ENST00000615513 ATRNO75882 1429 aa17.38■□□□□ 0.37
CDKN1A-208ENST00000615513 A0A0G2JLW4 131 aa17.38■□□□□ 0.37
CDKN1A-208ENST00000615513 FGAP02671 866 aa17.38■□□□□ 0.37
CDKN1A-208ENST00000615513 MCM5P33992 734 aa17.38■□□□□ 0.37
CDKN1A-208ENST00000615513 PUS7LQ9H0K6 701 aaKnown RBP17.38■□□□□ 0.37
CDKN1A-208ENST00000615513 CCDC87Q9NVE4 849 aa17.38■□□□□ 0.37
CDKN1A-208ENST00000615513 SALL1Q9NSC2 1324 aa17.38■□□□□ 0.37
CDKN1A-208ENST00000615513 CTDNEP1O95476 244 aa17.38■□□□□ 0.37
CDKN1A-208ENST00000615513 UQCRFS1P1P0C7P4 283 aa17.38■□□□□ 0.37
CDKN1A-208ENST00000615513 ARID4AP29374 1257 aaPredicted RBP17.38■□□□□ 0.37
CDKN1A-208ENST00000615513 PDIA3P30101 505 aaKnown RBP17.38■□□□□ 0.37
CDKN1A-208ENST00000615513 ADD2P35612 726 aa17.38■□□□□ 0.37
CDKN1A-208ENST00000615513 INTS5Q6P9B9 1019 aaKnown RBP17.38■□□□□ 0.37
CDKN1A-208ENST00000615513 CFAP45Q9UL16 551 aa17.38■□□□□ 0.37
CDKN1A-208ENST00000615513 WDR19Q8NEZ3 1342 aa17.37■□□□□ 0.37
CDKN1A-208ENST00000615513 PTPDC1A2A3K4 754 aa17.37■□□□□ 0.37
CDKN1A-208ENST00000615513 GOLGA6L4A6NEF3 574 aa17.37■□□□□ 0.37
CDKN1A-208ENST00000615513 GPAA1O43292 621 aa17.37■□□□□ 0.37
CDKN1A-208ENST00000615513 PUM3Q15397 648 aaKnown RBP17.37■□□□□ 0.37
CDKN1A-208ENST00000615513 LPIN2Q92539 896 aa17.37■□□□□ 0.37
CDKN1A-208ENST00000615513 DDX11Q96FC9 970 aa17.37■□□□□ 0.37
CDKN1A-208ENST00000615513 UBE3CQ15386 1083 aa17.36■□□□□ 0.37
CDKN1A-208ENST00000615513 PARP10Q53GL7 1025 aa17.36■□□□□ 0.37
CDKN1A-208ENST00000615513 GIMAP6Q6P9H5 292 aa17.36■□□□□ 0.37
CDKN1A-208ENST00000615513 PI16Q6UXB8 463 aa17.36■□□□□ 0.37
CDKN1A-208ENST00000615513 AKAP11Q9UKA4 1901 aa17.36■□□□□ 0.37
CDKN1A-208ENST00000615513 FGFR2P21802 821 aa17.36■□□□□ 0.37
CDKN1A-208ENST00000615513 ATL3Q6DD88 541 aa17.36■□□□□ 0.37
CDKN1A-208ENST00000615513 DDX19AQ9NUU7 478 aaKnown RBP17.36■□□□□ 0.37
CDKN1A-208ENST00000615513 NRAPQ86VF7 1730 aa17.36■□□□□ 0.37
CDKN1A-208ENST00000615513 CICQ96RK0 1608 aaPredicted RBP17.36■□□□□ 0.37
CDKN1A-208ENST00000615513 NWD2Q9ULI1 1742 aa17.35■□□□□ 0.37
CDKN1A-208ENST00000615513 ZNF213O14771 459 aa17.35■□□□□ 0.37
CDKN1A-208ENST00000615513 HCLS1P14317 486 aaPredicted RBP17.35■□□□□ 0.37
CDKN1A-208ENST00000615513 TPRNQ4KMQ1 711 aa17.35■□□□□ 0.37
CDKN1A-208ENST00000615513 CCDC102BQ68D86 513 aa17.35■□□□□ 0.37
CDKN1A-208ENST00000615513 MB21D2Q8IYB1 491 aaPredicted RBP17.35■□□□□ 0.37
CDKN1A-208ENST00000615513 NCOA7Q8NI08 942 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms