RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 LNPKQ9C0E8 428 aa10.48□□□□□ -0.73
VPS11-206ENST00000614944 TBC1D2BQ9UPU7 963 aa10.48□□□□□ -0.73
VPS11-206ENST00000614944 GNPATO15228 680 aa10.48□□□□□ -0.73
VPS11-206ENST00000614944 TDO2P48775 406 aa10.48□□□□□ -0.73
VPS11-206ENST00000614944 G3BP1Q13283 466 aaKnown RBP eCLIP10.48□□□□□ -0.731e-6■■■■□ 23
VPS11-206ENST00000614944 SUSD4Q5VX71 490 aa10.48□□□□□ -0.73
VPS11-206ENST00000614944 TTLL11Q8NHH1 800 aa10.48□□□□□ -0.73
VPS11-206ENST00000614944 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.48□□□□□ -0.73
VPS11-206ENST00000614944 ZNF609O15014 1411 aa10.48□□□□□ -0.73
VPS11-206ENST00000614944 ZKSCAN8Q15776 578 aaPredicted RBP10.48□□□□□ -0.73
VPS11-206ENST00000614944 LMBR1LQ6UX01 489 aa10.48□□□□□ -0.73
VPS11-206ENST00000614944 UPF2Q9HAU5 1272 aaKnown RBP10.48□□□□□ -0.73
VPS11-206ENST00000614944 TNRC6CQ9HCJ0 1690 aaKnown RBP10.47□□□□□ -0.73
VPS11-206ENST00000614944 IRS4O14654 1257 aaPredicted RBP10.47□□□□□ -0.73
VPS11-206ENST00000614944 TRAK2O60296 914 aa10.47□□□□□ -0.73
VPS11-206ENST00000614944 ZPR1O75312 459 aa10.47□□□□□ -0.73
VPS11-206ENST00000614944 PDE1AP54750 535 aa10.47□□□□□ -0.73
VPS11-206ENST00000614944 DONSONQ9NYP3 566 aa10.47□□□□□ -0.73
VPS11-206ENST00000614944 SASH1O94885 1247 aa10.47□□□□□ -0.73
VPS11-206ENST00000614944 TRMT112Q9UI30 125 aaKnown RBP10.47□□□□□ -0.73
VPS11-206ENST00000614944 EXOC6BQ9Y2D4 811 aa10.47□□□□□ -0.73
VPS11-206ENST00000614944 EYA2O00167 538 aa10.46□□□□□ -0.73
VPS11-206ENST00000614944 MX1P20591 662 aa10.46□□□□□ -0.73
VPS11-206ENST00000614944 NOP2P46087 812 aaKnown RBP10.46□□□□□ -0.73
VPS11-206ENST00000614944 HS1BP3Q53T59 392 aa10.46□□□□□ -0.73
VPS11-206ENST00000614944 FAM182BQ5T319 152 aa10.46□□□□□ -0.73
VPS11-206ENST00000614944 ATG9AQ7Z3C6 839 aa10.46□□□□□ -0.73
VPS11-206ENST00000614944 CLASRPQ8N2M8 674 aaKnown RBP10.46□□□□□ -0.73
VPS11-206ENST00000614944 CAMKK2Q96RR4 588 aa10.46□□□□□ -0.73
VPS11-206ENST00000614944 BRMS1Q9HCU9 246 aa10.46□□□□□ -0.73
VPS11-206ENST00000614944 BSDC1Q9NW68 430 aaPredicted RBP10.46□□□□□ -0.73
VPS11-206ENST00000614944 RSPH14Q9UHP6 348 aa10.46□□□□□ -0.73
VPS11-206ENST00000614944 TM4SF1P30408 202 aa10.46□□□□□ -0.73
VPS11-206ENST00000614944 MYRIPQ8NFW9 859 aa10.46□□□□□ -0.73
VPS11-206ENST00000614944 ZNF512BQ96KM6 892 aaPredicted RBP10.46□□□□□ -0.73
VPS11-206ENST00000614944 CALR3Q96L12 384 aaKnown RBP10.46□□□□□ -0.73
VPS11-206ENST00000614944 NIP7Q9Y221 180 aaKnown RBP eCLIP10.46□□□□□ -0.73
VPS11-206ENST00000614944 ICE2Q659A1 982 aa10.46□□□□□ -0.74
VPS11-206ENST00000614944 ZNF710Q8N1W2 664 aa10.46□□□□□ -0.74
VPS11-206ENST00000614944 GPATCH3Q96I76 525 aa10.46□□□□□ -0.74
VPS11-206ENST00000614944 MRVI1Q9Y6F6 885 aa10.46□□□□□ -0.74
VPS11-206ENST00000614944 DLEC1Q9Y238 1755 aa10.46□□□□□ -0.74
VPS11-206ENST00000614944 KIF13BQ9NQT8 1826 aa10.45□□□□□ -0.74
VPS11-206ENST00000614944 KIF1CO43896 1103 aaKnown RBP10.45□□□□□ -0.74
VPS11-206ENST00000614944 MCM4P33991 863 aa10.45□□□□□ -0.74
VPS11-206ENST00000614944 RFC4P35249 363 aa10.45□□□□□ -0.74
VPS11-206ENST00000614944 IFIT5Q13325 482 aaKnown RBP10.45□□□□□ -0.74
VPS11-206ENST00000614944 CCDC57Q2TAC2 916 aa10.45□□□□□ -0.74
VPS11-206ENST00000614944 CCDC152Q4G0S7 254 aa10.45□□□□□ -0.74
VPS11-206ENST00000614944 USPL1Q5W0Q7 1092 aa10.45□□□□□ -0.74
VPS11-206ENST00000614944 SLKQ9H2G2 1235 aaPredicted RBP10.45□□□□□ -0.74
VPS11-206ENST00000614944 MROH5Q6ZUA9 1318 aa10.45□□□□□ -0.74
VPS11-206ENST00000614944 DUOX1Q9NRD9 1551 aa10.45□□□□□ -0.74
VPS11-206ENST00000614944 ANKRD18BA2A2Z9 1011 aa10.45□□□□□ -0.74
VPS11-206ENST00000614944 KLRG2A4D1S0 409 aaPredicted RBP10.45□□□□□ -0.74
VPS11-206ENST00000614944 ERC2O15083 957 aa10.45□□□□□ -0.74
VPS11-206ENST00000614944 APBA3O96018 575 aa10.45□□□□□ -0.74
VPS11-206ENST00000614944 TBC1D9BQ66K14 1250 aa10.45□□□□□ -0.74
VPS11-206ENST00000614944 PI4K2BQ8TCG2 481 aa10.45□□□□□ -0.74
VPS11-206ENST00000614944 FAM89AQ96GI7 184 aa10.45□□□□□ -0.74
VPS11-206ENST00000614944 FEZ1Q99689 392 aa10.45□□□□□ -0.74
VPS11-206ENST00000614944 AKAP2Q9Y2D5 859 aa10.45□□□□□ -0.74
VPS11-206ENST00000614944 ANKRD31Q8N7Z5 1873 aa10.45□□□□□ -0.74
VPS11-206ENST00000614944 DHX16O60231 1041 aaKnown RBP10.44□□□□□ -0.74
VPS11-206ENST00000614944 GLRX3O76003 335 aaKnown RBP10.44□□□□□ -0.74
VPS11-206ENST00000614944 GSPT1P15170 499 aaKnown RBP10.44□□□□□ -0.74
VPS11-206ENST00000614944 SETDB2Q96T68 719 aa10.44□□□□□ -0.74
VPS11-206ENST00000614944 NOL7Q9UMY1 257 aaKnown RBP10.44□□□□□ -0.74
VPS11-206ENST00000614944 RIPOR2Q9Y4F9 1068 aa10.44□□□□□ -0.74
VPS11-206ENST00000614944 GYS1P13807 737 aa10.44□□□□□ -0.74
VPS11-206ENST00000614944 TPTE2Q6XPS3 522 aa10.44□□□□□ -0.74
VPS11-206ENST00000614944 TMTC2Q8N394 836 aa10.44□□□□□ -0.74
VPS11-206ENST00000614944 PDCL2Q8N4E4 241 aa10.44□□□□□ -0.74
VPS11-206ENST00000614944 LTBP1Q14766 1721 aa10.44□□□□□ -0.74
VPS11-206ENST00000614944 DOCK2Q92608 1830 aa10.44□□□□□ -0.74
VPS11-206ENST00000614944 CDC45O75419 566 aa10.43□□□□□ -0.74
VPS11-206ENST00000614944 TNNI3KQ59H18 835 aa10.43□□□□□ -0.74
VPS11-206ENST00000614944 MNS1Q8NEH6 495 aa10.43□□□□□ -0.74
VPS11-206ENST00000614944 ECHDC1Q9NTX5 307 aa10.43□□□□□ -0.74
VPS11-206ENST00000614944 FPGT-TNNI3KV9GXZ4 949 aa10.43□□□□□ -0.74
VPS11-206ENST00000614944 KIAA1551Q9HCM1 1747 aa10.43□□□□□ -0.74
VPS11-206ENST00000614944 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.43□□□□□ -0.74
VPS11-206ENST00000614944 SLFN14P0C7P3 912 aa10.43□□□□□ -0.74
VPS11-206ENST00000614944 GUCY2CP25092 1073 aa10.43□□□□□ -0.74
VPS11-206ENST00000614944 VGLL2Q8N8G2 317 aa10.43□□□□□ -0.74
VPS11-206ENST00000614944 ZNF330Q9Y3S2 320 aaPredicted RBP10.43□□□□□ -0.74
VPS11-206ENST00000614944 GPTP24298 496 aa10.43□□□□□ -0.74
VPS11-206ENST00000614944 CALRP27797 417 aaKnown RBP10.43□□□□□ -0.74
VPS11-206ENST00000614944 IL17RAQ96F46 866 aa10.43□□□□□ -0.74
VPS11-206ENST00000614944 SNRKQ9NRH2 765 aa10.43□□□□□ -0.74
VPS11-206ENST00000614944 MPHOSPH10O00566 681 aaKnown RBP10.42□□□□□ -0.74
VPS11-206ENST00000614944 SMARCA5O60264 1052 aaPredicted RBP10.42□□□□□ -0.74
VPS11-206ENST00000614944 TNNT1P13805 278 aa10.42□□□□□ -0.74
VPS11-206ENST00000614944 ATP5JP18859 108 aa10.42□□□□□ -0.74
VPS11-206ENST00000614944 AMIGO3Q86WK7 504 aa10.42□□□□□ -0.74
VPS11-206ENST00000614944 NLGN1Q8N2Q7 840 aa10.42□□□□□ -0.74
VPS11-206ENST00000614944 OGFRQ9NZT2 677 aa10.42□□□□□ -0.74
VPS11-206ENST00000614944 PA2G4Q9UQ80 394 aaKnown RBP10.42□□□□□ -0.74
VPS11-206ENST00000614944 ITGA6P23229 1130 aa10.42□□□□□ -0.74
VPS11-206ENST00000614944 CRY2Q49AN0 593 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms