RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 BLOC1S2Q6QNY1 142 aa19.49■□□□□ 0.71
CNOT3-208ENST00000613073 XAGE2Q96GT9 111 aa19.49■□□□□ 0.71
CNOT3-208ENST00000613073 THRAP3Q9Y2W1 955 aaKnown RBP19.49■□□□□ 0.71
CNOT3-208ENST00000613073 HCLS1P14317 486 aaPredicted RBP19.49■□□□□ 0.71
CNOT3-208ENST00000613073 PSMA5P28066 241 aa19.49■□□□□ 0.71
CNOT3-208ENST00000613073 GTF2F1P35269 517 aaKnown RBP eCLIP19.49■□□□□ 0.71
CNOT3-208ENST00000613073 LDHAL6AQ6ZMR3 332 aa19.49■□□□□ 0.71
CNOT3-208ENST00000613073 SMC3Q9UQE7 1217 aa19.49■□□□□ 0.71
CNOT3-208ENST00000613073 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.49■□□□□ 0.71
CNOT3-208ENST00000613073 UBN2Q6ZU65 1347 aa19.49■□□□□ 0.71
CNOT3-208ENST00000613073 LRP6O75581 1613 aa19.49■□□□□ 0.71
CNOT3-208ENST00000613073 RPAP1Q9BWH6 1393 aaPredicted RBP19.49■□□□□ 0.71
CNOT3-208ENST00000613073 RIOK3O14730 519 aaKnown RBP19.49■□□□□ 0.71
CNOT3-208ENST00000613073 TPCN1Q9ULQ1 816 aa19.49■□□□□ 0.71
CNOT3-208ENST00000613073 SPATA31A5Q5VU36 1347 aa19.48■□□□□ 0.71
CNOT3-208ENST00000613073 SPATA31A7Q8IWB4 1347 aa19.48■□□□□ 0.71
CNOT3-208ENST00000613073 KCNQ2O43526 872 aa19.48■□□□□ 0.71
CNOT3-208ENST00000613073 CTSWP56202 376 aa19.48■□□□□ 0.71
CNOT3-208ENST00000613073 MAPK8IP2Q13387 824 aaPredicted RBP19.48■□□□□ 0.71
CNOT3-208ENST00000613073 TTC39AQ5SRH9 613 aa19.48■□□□□ 0.71
CNOT3-208ENST00000613073 CRKLP46109 303 aaKnown RBP19.48■□□□□ 0.71
CNOT3-208ENST00000613073 METTL24Q5JXM2 366 aa19.48■□□□□ 0.71
CNOT3-208ENST00000613073 CCDC158Q5M9N0 1113 aa19.48■□□□□ 0.71
CNOT3-208ENST00000613073 INTS5Q6P9B9 1019 aaKnown RBP19.48■□□□□ 0.71
CNOT3-208ENST00000613073 LOC102724428A0A0B4J2F2 783 aa19.47■□□□□ 0.71
CNOT3-208ENST00000613073 SIK1P57059 783 aa19.47■□□□□ 0.71
CNOT3-208ENST00000613073 CNNM1Q9NRU3 951 aa19.47■□□□□ 0.71
CNOT3-208ENST00000613073 WNK3Q9BYP7 1800 aa19.47■□□□□ 0.71
CNOT3-208ENST00000613073 SYAP1Q96A49 352 aaPredicted RBP19.47■□□□□ 0.71
CNOT3-208ENST00000613073 AKAP2Q9Y2D5 859 aa19.47■□□□□ 0.71
CNOT3-208ENST00000613073 CDHR2Q9BYE9 1310 aa19.47■□□□□ 0.71
CNOT3-208ENST00000613073 WDR33Q9C0J8 1336 aaKnown RBP19.47■□□□□ 0.71
CNOT3-208ENST00000613073 ST3GAL1Q11201 340 aa19.46■□□□□ 0.71
CNOT3-208ENST00000613073 ITPK1Q13572 414 aa19.46■□□□□ 0.71
CNOT3-208ENST00000613073 SCARF1Q14162 830 aa19.46■□□□□ 0.71
CNOT3-208ENST00000613073 USPL1Q5W0Q7 1092 aa19.46■□□□□ 0.71
CNOT3-208ENST00000613073 PI16Q6UXB8 463 aa19.46■□□□□ 0.71
CNOT3-208ENST00000613073 JCADQ9P266 1359 aa19.46■□□□□ 0.71
CNOT3-208ENST00000613073 ANKRD18BA2A2Z9 1011 aa19.46■□□□□ 0.71
CNOT3-208ENST00000613073 TOM1O60784 492 aa19.46■□□□□ 0.71
CNOT3-208ENST00000613073 CYP21A2P08686 494 aa19.46■□□□□ 0.71
CNOT3-208ENST00000613073 PDIA4P13667 645 aaKnown RBP19.46■□□□□ 0.71
CNOT3-208ENST00000613073 SYT1P21579 422 aa19.46■□□□□ 0.71
CNOT3-208ENST00000613073 RPS6KB1P23443 525 aa19.46■□□□□ 0.71
CNOT3-208ENST00000613073 GJB2P29033 226 aa19.46■□□□□ 0.71
CNOT3-208ENST00000613073 FAM98CQ17RN3 349 aaKnown RBP19.46■□□□□ 0.71
CNOT3-208ENST00000613073 SPC24Q8NBT2 197 aa19.46■□□□□ 0.71
CNOT3-208ENST00000613073 CCDC87Q9NVE4 849 aa19.46■□□□□ 0.71
CNOT3-208ENST00000613073 HMG20BQ9P0W2 317 aa19.46■□□□□ 0.71
CNOT3-208ENST00000613073 ERVV-1B6SEH8 477 aa19.45■□□□□ 0.7
CNOT3-208ENST00000613073 EIF5P55010 431 aaKnown RBP19.45■□□□□ 0.7
CNOT3-208ENST00000613073 ZSCAN31Q96LW9 406 aaPredicted RBP19.45■□□□□ 0.7
CNOT3-208ENST00000613073 TMEM51Q9NW97 253 aa19.45■□□□□ 0.7
CNOT3-208ENST00000613073 RIPOR2Q9Y4F9 1068 aa19.45■□□□□ 0.7
CNOT3-208ENST00000613073 NUP98P52948 1817 aa19.45■□□□□ 0.7
CNOT3-208ENST00000613073 RFX7Q2KHR2 1363 aa19.45■□□□□ 0.7
CNOT3-208ENST00000613073 PALLDQ8WX93 1383 aa19.45■□□□□ 0.7
CNOT3-208ENST00000613073 PYCARDQ9ULZ3 195 aa19.45■□□□□ 0.7
CNOT3-208ENST00000613073 NRAPQ86VF7 1730 aa19.45■□□□□ 0.7
CNOT3-208ENST00000613073 SH3TC1Q8TE82 1336 aa19.44■□□□□ 0.7
CNOT3-208ENST00000613073 STK3Q13188 491 aa19.44■□□□□ 0.7
CNOT3-208ENST00000613073 SH2B1Q9NRF2 756 aaPredicted RBP19.44■□□□□ 0.7
CNOT3-208ENST00000613073 U3KPZ7 1027 aaPredicted RBP19.44■□□□□ 0.7
CNOT3-208ENST00000613073 STX6O43752 255 aa19.44■□□□□ 0.7
CNOT3-208ENST00000613073 ZNF34Q8IZ26 560 aa19.44■□□□□ 0.7
CNOT3-208ENST00000613073 C8orf37Q96NL8 207 aa19.44■□□□□ 0.7
CNOT3-208ENST00000613073 FBXO3Q9UK99 471 aa19.44■□□□□ 0.7
CNOT3-208ENST00000613073 A0A0G2JLW4 131 aa19.44■□□□□ 0.7
CNOT3-208ENST00000613073 PDE8AO60658 829 aa19.44■□□□□ 0.7
CNOT3-208ENST00000613073 KCNQ4P56696 695 aa19.44■□□□□ 0.7
CNOT3-208ENST00000613073 SUSD4Q5VX71 490 aa19.44■□□□□ 0.7
CNOT3-208ENST00000613073 USP48Q86UV5 1035 aa19.44■□□□□ 0.7
CNOT3-208ENST00000613073 RNF113AO15541 343 aaKnown RBP19.43■□□□□ 0.7
CNOT3-208ENST00000613073 ZAP70P43403 619 aa19.43■□□□□ 0.7
CNOT3-208ENST00000613073 TOB2Q14106 344 aaPredicted RBP19.43■□□□□ 0.7
CNOT3-208ENST00000613073 ZMYM1Q5SVZ6 1142 aa19.43■□□□□ 0.7
CNOT3-208ENST00000613073 NEK1Q96PY6 1258 aa19.43■□□□□ 0.7
CNOT3-208ENST00000613073 HELLSQ9NRZ9 838 aa19.43■□□□□ 0.7
CNOT3-208ENST00000613073 NAP1L2Q9ULW6 460 aaPredicted RBP19.43■□□□□ 0.7
CNOT3-208ENST00000613073 CHAF1AQ13111 956 aaPredicted RBP19.43■□□□□ 0.7
CNOT3-208ENST00000613073 TSGA10IPQ3SY00 556 aa19.43■□□□□ 0.7
CNOT3-208ENST00000613073 HELBQ8NG08 1087 aaPredicted RBP19.43■□□□□ 0.7
CNOT3-208ENST00000613073 LRRC2Q9BYS8 371 aa19.43■□□□□ 0.7
CNOT3-208ENST00000613073 MAST3O60307 1309 aa19.42■□□□□ 0.7
CNOT3-208ENST00000613073 ZSCAN22P10073 491 aaPredicted RBP19.42■□□□□ 0.7
CNOT3-208ENST00000613073 RIC1Q4ADV7 1423 aa19.42■□□□□ 0.7
CNOT3-208ENST00000613073 M0R2C6 588 aa19.42■□□□□ 0.7
CNOT3-208ENST00000613073 WASHC4Q2M389 1173 aa19.42■□□□□ 0.7
CNOT3-208ENST00000613073 NGLY1Q96IV0 654 aa19.42■□□□□ 0.7
CNOT3-208ENST00000613073 OSBP2Q969R2 916 aa19.41■□□□□ 0.7
CNOT3-208ENST00000613073 PHF14O94880 888 aa19.41■□□□□ 0.7
CNOT3-208ENST00000613073 HSPD1P10809 573 aaKnown RBP19.41■□□□□ 0.7
CNOT3-208ENST00000613073 KRT32Q14532 448 aa19.41■□□□□ 0.7
CNOT3-208ENST00000613073 SPTLC3Q9NUV7 552 aa19.41■□□□□ 0.7
CNOT3-208ENST00000613073 TCHHQ07283 1943 aa19.41■□□□□ 0.7
CNOT3-208ENST00000613073 UBAP1LF5GYI3 381 aa19.4■□□□□ 0.7
CNOT3-208ENST00000613073 BARGINQ6ZT62 677 aa19.4■□□□□ 0.7
CNOT3-208ENST00000613073 STOX1Q6ZVD7 989 aa19.4■□□□□ 0.7
CNOT3-208ENST00000613073 ANKRD36CQ5JPF3 1778 aa19.4■□□□□ 0.7
CNOT3-208ENST00000613073 SLIT2O94813 1529 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms