RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 GPT2Q8TD30 523 aa14.2□□□□□ -0.14
USP6NL-206ENST00000609853 FOXD4L4Q8WXT5 416 aaPredicted RBP14.2□□□□□ -0.14
USP6NL-206ENST00000609853 ARAP2Q8WZ64 1704 aa14.2□□□□□ -0.14
USP6NL-206ENST00000609853 MAST3O60307 1309 aa14.2□□□□□ -0.14
USP6NL-206ENST00000609853 UBAP1LF5GYI3 381 aa14.19□□□□□ -0.14
USP6NL-206ENST00000609853 CAMTA2O94983 1202 aa14.19□□□□□ -0.14
USP6NL-206ENST00000609853 CLEC4GQ6UXB4 293 aa14.19□□□□□ -0.14
USP6NL-206ENST00000609853 DHX32Q7L7V1 743 aaKnown RBP14.19□□□□□ -0.14
USP6NL-206ENST00000609853 APPBP2Q92624 585 aa14.19□□□□□ -0.14
USP6NL-206ENST00000609853 ACSBG1Q96GR2 724 aa14.19□□□□□ -0.14
USP6NL-206ENST00000609853 CCDC85AQ96PX6 553 aaPredicted RBP14.19□□□□□ -0.14
USP6NL-206ENST00000609853 LAMA4Q16363 1823 aa14.19□□□□□ -0.14
USP6NL-206ENST00000609853 PUM3Q15397 648 aaKnown RBP14.18□□□□□ -0.14
USP6NL-206ENST00000609853 FBXL16Q8N461 479 aa14.18□□□□□ -0.14
USP6NL-206ENST00000609853 LPIN2Q92539 896 aa14.18□□□□□ -0.14
USP6NL-206ENST00000609853 LARP6Q9BRS8 491 aaKnown RBP14.18□□□□□ -0.14
USP6NL-206ENST00000609853 PHF14O94880 888 aa14.18□□□□□ -0.14
USP6NL-206ENST00000609853 PIP4K2BP78356 416 aa14.18□□□□□ -0.14
USP6NL-206ENST00000609853 ST3GAL1Q11201 340 aa14.18□□□□□ -0.14
USP6NL-206ENST00000609853 ITPK1Q13572 414 aa14.18□□□□□ -0.14
USP6NL-206ENST00000609853 CCDC152Q4G0S7 254 aa14.18□□□□□ -0.14
USP6NL-206ENST00000609853 SUSD4Q5VX71 490 aa14.18□□□□□ -0.14
USP6NL-206ENST00000609853 LARP1BQ659C4 914 aaKnown RBP14.18□□□□□ -0.14
USP6NL-206ENST00000609853 GAS2L3Q86XJ1 694 aa14.18□□□□□ -0.14
USP6NL-206ENST00000609853 LLPHQ9BRT6 129 aaKnown RBP14.18□□□□□ -0.14
USP6NL-206ENST00000609853 MTMR6Q9Y217 621 aa14.18□□□□□ -0.14
USP6NL-206ENST00000609853 TAF6LQ9Y6J9 622 aa14.18□□□□□ -0.14
USP6NL-206ENST00000609853 BCORQ6W2J9 1755 aa14.18□□□□□ -0.14
USP6NL-206ENST00000609853 ARID4AP29374 1257 aaPredicted RBP14.17□□□□□ -0.14
USP6NL-206ENST00000609853 ZAP70P43403 619 aa14.17□□□□□ -0.14
USP6NL-206ENST00000609853 NECAB1Q8N987 351 aa14.17□□□□□ -0.14
USP6NL-206ENST00000609853 GTF3C6Q969F1 213 aa14.17□□□□□ -0.14
USP6NL-206ENST00000609853 AGXT2Q9BYV1 514 aa14.17□□□□□ -0.14
USP6NL-206ENST00000609853 DDX60Q8IY21 1712 aaKnown RBP14.17□□□□□ -0.14
USP6NL-206ENST00000609853 ATRNO75882 1429 aa14.17□□□□□ -0.14
USP6NL-206ENST00000609853 A0A0G2JS52 829 aa14.16□□□□□ -0.14
USP6NL-206ENST00000609853 CHGBP05060 677 aa14.16□□□□□ -0.14
USP6NL-206ENST00000609853 FGFR2P21802 821 aa14.16□□□□□ -0.14
USP6NL-206ENST00000609853 FGD1P98174 961 aa14.16□□□□□ -0.14
USP6NL-206ENST00000609853 EXOSC10Q01780 885 aaKnown RBP14.16□□□□□ -0.14
USP6NL-206ENST00000609853 Q6ZUG5 572 aa14.16□□□□□ -0.14
USP6NL-206ENST00000609853 USP48Q86UV5 1035 aa14.16□□□□□ -0.14
USP6NL-206ENST00000609853 ANP32BQ92688 251 aaKnown RBP14.16□□□□□ -0.14
USP6NL-206ENST00000609853 OSBP2Q969R2 916 aa14.16□□□□□ -0.14
USP6NL-206ENST00000609853 RNF216Q9NWF9 866 aaPredicted RBP14.16□□□□□ -0.14
USP6NL-206ENST00000609853 M0R2C6 588 aa14.15□□□□□ -0.14
USP6NL-206ENST00000609853 SLC5A1P13866 664 aa14.15□□□□□ -0.14
USP6NL-206ENST00000609853 HOXD11P31277 338 aaPredicted RBP14.15□□□□□ -0.14
USP6NL-206ENST00000609853 UBE2HP62256 183 aa14.15□□□□□ -0.14
USP6NL-206ENST00000609853 UBE3CQ15386 1083 aa14.15□□□□□ -0.14
USP6NL-206ENST00000609853 IMMTQ16891 758 aaKnown RBP14.15□□□□□ -0.14
USP6NL-206ENST00000609853 WASHC4Q2M389 1173 aa14.15□□□□□ -0.14
USP6NL-206ENST00000609853 FNBP4Q8N3X1 1017 aaPredicted RBP14.15□□□□□ -0.14
USP6NL-206ENST00000609853 MPHOSPH8Q99549 860 aa14.15□□□□□ -0.14
USP6NL-206ENST00000609853 KIF3AQ9Y496 699 aa14.15□□□□□ -0.14
USP6NL-206ENST00000609853 BCL9LQ86UU0 1499 aa14.15□□□□□ -0.14
USP6NL-206ENST00000609853 E7EWF7 191 aa14.15□□□□□ -0.14
USP6NL-206ENST00000609853 PFKFB2O60825 505 aa14.15□□□□□ -0.14
USP6NL-206ENST00000609853 LETM1O95202 739 aaPredicted RBP14.15□□□□□ -0.14
USP6NL-206ENST00000609853 NTSR2O95665 410 aa14.15□□□□□ -0.14
USP6NL-206ENST00000609853 MCAMP43121 646 aa14.15□□□□□ -0.14
USP6NL-206ENST00000609853 SCARF1Q14162 830 aa14.15□□□□□ -0.14
USP6NL-206ENST00000609853 LRSAM1Q6UWE0 723 aa14.15□□□□□ -0.14
USP6NL-206ENST00000609853 NGLY1Q96IV0 654 aa14.15□□□□□ -0.14
USP6NL-206ENST00000609853 NIP7Q9Y221 180 aaKnown RBP eCLIP14.15□□□□□ -0.14
USP6NL-206ENST00000609853 ADD2P35612 726 aa14.14□□□□□ -0.15
USP6NL-206ENST00000609853 IGHMBP2P38935 993 aaKnown RBP14.14□□□□□ -0.15
USP6NL-206ENST00000609853 CCDC102BQ68D86 513 aa14.14□□□□□ -0.15
USP6NL-206ENST00000609853 STOX1Q6ZVD7 989 aa14.14□□□□□ -0.15
USP6NL-206ENST00000609853 TCEANC2Q96MN5 208 aa14.14□□□□□ -0.15
USP6NL-206ENST00000609853 TMEM63CQ9P1W3 806 aa14.14□□□□□ -0.15
USP6NL-206ENST00000609853 WDR19Q8NEZ3 1342 aa14.14□□□□□ -0.15
USP6NL-206ENST00000609853 CNTNAP4Q9C0A0 1308 aa14.14□□□□□ -0.15
USP6NL-206ENST00000609853 SPATA31A6Q5VVP1 1343 aa14.13□□□□□ -0.15
USP6NL-206ENST00000609853 KCNA4P22459 653 aa14.13□□□□□ -0.15
USP6NL-206ENST00000609853 NASPP49321 788 aaPredicted RBP14.13□□□□□ -0.15
USP6NL-206ENST00000609853 HMGN5P82970 282 aaKnown RBP14.13□□□□□ -0.15
USP6NL-206ENST00000609853 FAM98CQ17RN3 349 aaKnown RBP14.13□□□□□ -0.15
USP6NL-206ENST00000609853 RC3H1Q5TC82 1133 aaKnown RBP14.13□□□□□ -0.15
USP6NL-206ENST00000609853 ILDR2Q71H61 639 aa14.13□□□□□ -0.15
USP6NL-206ENST00000609853 FAM43AQ8N2R8 423 aa14.13□□□□□ -0.15
USP6NL-206ENST00000609853 ZNF274Q96GC6 653 aaPredicted RBP14.13□□□□□ -0.15
USP6NL-206ENST00000609853 VPS37CA5D8V6 355 aaPredicted RBP14.12□□□□□ -0.15
USP6NL-206ENST00000609853 HCLS1P14317 486 aaPredicted RBP14.12□□□□□ -0.15
USP6NL-206ENST00000609853 EVCP57679 992 aa14.12□□□□□ -0.15
USP6NL-206ENST00000609853 COL9A3Q14050 684 aaPredicted RBP14.12□□□□□ -0.15
USP6NL-206ENST00000609853 BRF1Q92994 677 aa14.12□□□□□ -0.15
USP6NL-206ENST00000609853 CHAMP1Q96JM3 812 aa14.12□□□□□ -0.15
USP6NL-206ENST00000609853 CDC5LQ99459 802 aaKnown RBP14.12□□□□□ -0.15
USP6NL-206ENST00000609853 PANK2Q9BZ23 570 aa14.12□□□□□ -0.15
USP6NL-206ENST00000609853 CNPY2Q9Y2B0 182 aa14.12□□□□□ -0.15
USP6NL-206ENST00000609853 ELP1O95163 1332 aa14.12□□□□□ -0.15
USP6NL-206ENST00000609853 DOCK2Q92608 1830 aa14.12□□□□□ -0.15
USP6NL-206ENST00000609853 GPAA1O43292 621 aa14.12□□□□□ -0.15
USP6NL-206ENST00000609853 KCNQ2O43526 872 aa14.12□□□□□ -0.15
USP6NL-206ENST00000609853 FGAP02671 866 aa14.12□□□□□ -0.15
USP6NL-206ENST00000609853 KRT85P78386 507 aa14.12□□□□□ -0.15
USP6NL-206ENST00000609853 SLC9C2Q5TAH2 1124 aa14.12□□□□□ -0.15
USP6NL-206ENST00000609853 SMARCC2Q8TAQ2 1214 aa14.12□□□□□ -0.15
USP6NL-206ENST00000609853 ZMYM6O95789 1325 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms