RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 COA1Q9GZY4 146 aa20.31■□□□□ 0.84
HDDC2-210ENST00000609574 POLR2AP24928 1970 aaKnown RBP20.31■□□□□ 0.84
HDDC2-210ENST00000609574 TBC1D8O95759 1140 aa20.3■□□□□ 0.84
HDDC2-210ENST00000609574 CCT4P50991 539 aaKnown RBP20.3■□□□□ 0.84
HDDC2-210ENST00000609574 NBPF9Q3BBW0 867 aa20.3■□□□□ 0.84
HDDC2-210ENST00000609574 KSR2Q6VAB6 950 aa20.3■□□□□ 0.84
HDDC2-210ENST00000609574 MINPP1Q9UNW1 487 aa20.3■□□□□ 0.84
HDDC2-210ENST00000609574 HPS5Q9UPZ3 1129 aa20.3■□□□□ 0.84
HDDC2-210ENST00000609574 LEMD3Q9Y2U8 911 aa20.3■□□□□ 0.84
HDDC2-210ENST00000609574 PRAMEF18Q5VWM3 479 aa20.29■□□□□ 0.84
HDDC2-210ENST00000609574 MOB2Q70IA6 237 aa20.29■□□□□ 0.84
HDDC2-210ENST00000609574 C8orf58Q8NAV2 365 aa20.29■□□□□ 0.84
HDDC2-210ENST00000609574 TTLL11Q8NHH1 800 aa20.29■□□□□ 0.84
HDDC2-210ENST00000609574 ZNF296Q8WUU4 475 aaPredicted RBP20.29■□□□□ 0.84
HDDC2-210ENST00000609574 ANKRD2Q9GZV1 360 aa20.29■□□□□ 0.84
HDDC2-210ENST00000609574 MED23Q9ULK4 1368 aa20.29■□□□□ 0.84
HDDC2-210ENST00000609574 AKAP11Q9UKA4 1901 aa20.28■□□□□ 0.84
HDDC2-210ENST00000609574 KCNJ4P48050 445 aa20.28■□□□□ 0.84
HDDC2-210ENST00000609574 TM4SF4P48230 202 aa20.28■□□□□ 0.84
HDDC2-210ENST00000609574 DACT2Q5SW24 774 aa20.28■□□□□ 0.84
HDDC2-210ENST00000609574 APOBEC3FQ8IUX4 373 aaKnown RBP20.28■□□□□ 0.84
HDDC2-210ENST00000609574 SCAF8Q9UPN6 1271 aaKnown RBP20.28■□□□□ 0.84
HDDC2-210ENST00000609574 PI4KAP2A4QPH2 592 aa20.27■□□□□ 0.84
HDDC2-210ENST00000609574 WNT10BO00744 389 aa20.27■□□□□ 0.84
HDDC2-210ENST00000609574 PRPF38BQ5VTL8 546 aaKnown RBP20.27■□□□□ 0.84
HDDC2-210ENST00000609574 TTLL5Q6EMB2 1281 aa20.27■□□□□ 0.84
HDDC2-210ENST00000609574 PI4KAP1Q8N8J0 262 aa20.27■□□□□ 0.84
HDDC2-210ENST00000609574 MPHOSPH8Q99549 860 aa20.27■□□□□ 0.84
HDDC2-210ENST00000609574 GREM2Q9H772 168 aa20.27■□□□□ 0.84
HDDC2-210ENST00000609574 PDE4DIPQ5VU43 2346 aa20.27■□□□□ 0.84
HDDC2-210ENST00000609574 GPR25O00155 361 aa20.26■□□□□ 0.83
HDDC2-210ENST00000609574 ALDH1A1P00352 501 aa20.26■□□□□ 0.83
HDDC2-210ENST00000609574 MKRN3Q13064 507 aaKnown RBP20.26■□□□□ 0.83
HDDC2-210ENST00000609574 NOM1Q5C9Z4 860 aaKnown RBP20.26■□□□□ 0.83
HDDC2-210ENST00000609574 PAPPA2Q9BXP8 1791 aa20.26■□□□□ 0.83
HDDC2-210ENST00000609574 FKTNO75072 461 aa20.25■□□□□ 0.83
HDDC2-210ENST00000609574 MXD3Q9BW11 206 aa20.25■□□□□ 0.83
HDDC2-210ENST00000609574 INHBEP58166 350 aa20.24■□□□□ 0.83
HDDC2-210ENST00000609574 PRKG1Q13976 671 aa20.24■□□□□ 0.83
HDDC2-210ENST00000609574 FBXO46Q6PJ61 603 aaPredicted RBP20.24■□□□□ 0.83
HDDC2-210ENST00000609574 SCN9AQ15858 1988 aa20.24■□□□□ 0.83
HDDC2-210ENST00000609574 ZNF804BA4D1E1 1349 aa20.24■□□□□ 0.83
HDDC2-210ENST00000609574 COL4A1P02462 1669 aa20.23■□□□□ 0.83
HDDC2-210ENST00000609574 SASH1O94885 1247 aa20.23■□□□□ 0.83
HDDC2-210ENST00000609574 IGKV5-2P06315 115 aa20.23■□□□□ 0.83
HDDC2-210ENST00000609574 UBE3BQ7Z3V4 1068 aa20.23■□□□□ 0.83
HDDC2-210ENST00000609574 KIAA0825Q8IV33 1275 aa20.23■□□□□ 0.83
HDDC2-210ENST00000609574 SLC10A4Q96EP9 437 aa20.23■□□□□ 0.83
HDDC2-210ENST00000609574 GTF2IP78347 998 aa20.22■□□□□ 0.83
HDDC2-210ENST00000609574 PTPN12Q05209 780 aaKnown RBP20.22■□□□□ 0.83
HDDC2-210ENST00000609574 DLGAP5Q15398 846 aa20.22■□□□□ 0.83
HDDC2-210ENST00000609574 MYH16Q9H6N6 1097 aa20.22■□□□□ 0.83
HDDC2-210ENST00000609574 ANGEL1Q9UNK9 670 aaKnown RBP20.22■□□□□ 0.83
HDDC2-210ENST00000609574 WTIPA6NIX2 430 aaPredicted RBP20.21■□□□□ 0.83
HDDC2-210ENST00000609574 NEURL1BA8MQ27 555 aa20.21■□□□□ 0.83
HDDC2-210ENST00000609574 MYO1BO43795 1136 aa20.21■□□□□ 0.83
HDDC2-210ENST00000609574 PPP1R12BO60237 982 aaPredicted RBP20.21■□□□□ 0.83
HDDC2-210ENST00000609574 ITGA6P23229 1130 aa20.21■□□□□ 0.83
HDDC2-210ENST00000609574 CWF19L2Q2TBE0 894 aaKnown RBP20.21■□□□□ 0.83
HDDC2-210ENST00000609574 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.21■□□□□ 0.83
HDDC2-210ENST00000609574 MANSC4A6NHS7 340 aaPredicted RBP20.2■□□□□ 0.82
HDDC2-210ENST00000609574 H7C1W4 665 aa20.2■□□□□ 0.82
HDDC2-210ENST00000609574 SLC4A2P04920 1241 aa20.2■□□□□ 0.82
HDDC2-210ENST00000609574 PRKRIP1Q9H875 184 aaPredicted RBP20.2■□□□□ 0.82
HDDC2-210ENST00000609574 SUPT20HL1Q3ZLR7 823 aa20.19■□□□□ 0.82
HDDC2-210ENST00000609574 SPRYD7Q5W111 196 aa20.19■□□□□ 0.82
HDDC2-210ENST00000609574 OTUD7BQ6GQQ9 843 aa20.19■□□□□ 0.82
HDDC2-210ENST00000609574 TSPYL6Q8N831 410 aa20.19■□□□□ 0.82
HDDC2-210ENST00000609574 CFHR5Q9BXR6 569 aa20.19■□□□□ 0.82
HDDC2-210ENST00000609574 ANKRD18BA2A2Z9 1011 aa20.18■□□□□ 0.82
HDDC2-210ENST00000609574 TWISTNBQ3B726 338 aaPredicted RBP20.18■□□□□ 0.82
HDDC2-210ENST00000609574 LDLRAD1Q5T700 205 aa20.18■□□□□ 0.82
HDDC2-210ENST00000609574 TXNRD3Q86VQ6 643 aa20.18■□□□□ 0.82
HDDC2-210ENST00000609574 DEFB129Q9H1M3 183 aa20.18■□□□□ 0.82
HDDC2-210ENST00000609574 PPP2R3BQ9Y5P8 575 aa20.18■□□□□ 0.82
HDDC2-210ENST00000609574 GCKRQ14397 625 aa20.17■□□□□ 0.82
HDDC2-210ENST00000609574 GCC1Q96CN9 775 aa20.17■□□□□ 0.82
HDDC2-210ENST00000609574 PLA2G12BQ9BX93 195 aa20.17■□□□□ 0.82
HDDC2-210ENST00000609574 CD209Q9NNX6 404 aa20.17■□□□□ 0.82
HDDC2-210ENST00000609574 UNCXA6NJT0 531 aa20.16■□□□□ 0.82
HDDC2-210ENST00000609574 CHRNDQ07001 517 aa20.16■□□□□ 0.82
HDDC2-210ENST00000609574 INTS3Q68E01 1043 aaKnown RBP20.16■□□□□ 0.82
HDDC2-210ENST00000609574 TSR2Q969E8 191 aaKnown RBP20.16■□□□□ 0.82
HDDC2-210ENST00000609574 TNRC18O15417 2968 aaPredicted RBP20.16■□□□□ 0.82
HDDC2-210ENST00000609574 ZBTB48P10074 688 aaPredicted RBP20.15■□□□□ 0.82
HDDC2-210ENST00000609574 FKBP5Q13451 457 aaPredicted RBP20.15■□□□□ 0.82
HDDC2-210ENST00000609574 ZNF804AQ7Z570 1209 aa20.15■□□□□ 0.82
HDDC2-210ENST00000609574 CHMP3Q9Y3E7 222 aa20.15■□□□□ 0.82
HDDC2-210ENST00000609574 TRIM17Q9Y577 477 aa20.15■□□□□ 0.82
HDDC2-210ENST00000609574 CSF1RP07333 972 aa20.14■□□□□ 0.81
HDDC2-210ENST00000609574 IREB2P48200 963 aaKnown RBP20.14■□□□□ 0.81
HDDC2-210ENST00000609574 RBM5P52756 815 aaKnown RBP eCLIP20.14■□□□□ 0.81
HDDC2-210ENST00000609574 IFIT5Q13325 482 aaKnown RBP20.14■□□□□ 0.81
HDDC2-210ENST00000609574 IFNL1Q8IU54 200 aa20.14■□□□□ 0.81
HDDC2-210ENST00000609574 MTMR14Q8NCE2 650 aa20.14■□□□□ 0.81
HDDC2-210ENST00000609574 DNAAF4Q8WXU2 420 aa20.14■□□□□ 0.81
HDDC2-210ENST00000609574 COL1A1P02452 1464 aaPredicted RBP20.13■□□□□ 0.81
HDDC2-210ENST00000609574 FLIIQ13045 1269 aa20.13■□□□□ 0.81
HDDC2-210ENST00000609574 LINS1Q8NG48 757 aa20.13■□□□□ 0.81
HDDC2-210ENST00000609574 ERO1AQ96HE7 468 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms