RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 MYH16Q9H6N6 1097 aa16.82■□□□□ 0.28
RPS28-204ENST00000602140 MYOZ2Q9NPC6 264 aa16.82■□□□□ 0.28
RPS28-204ENST00000602140 SPEF2Q9C093 1822 aa16.82■□□□□ 0.28
RPS28-204ENST00000602140 FAM155AB1AL88 458 aaPredicted RBP16.81■□□□□ 0.28
RPS28-204ENST00000602140 VAMP4O75379 141 aa16.81■□□□□ 0.28
RPS28-204ENST00000602140 ITGA6P23229 1130 aa16.81■□□□□ 0.28
RPS28-204ENST00000602140 CASP7P55210 303 aa16.81■□□□□ 0.28
RPS28-204ENST00000602140 WDR63Q8IWG1 891 aa16.81■□□□□ 0.28
RPS28-204ENST00000602140 CDCA5Q96FF9 252 aa16.81■□□□□ 0.28
RPS28-204ENST00000602140 PLA2G12BQ9BX93 195 aa16.81■□□□□ 0.28
RPS28-204ENST00000602140 PSME4Q14997 1843 aa16.81■□□□□ 0.28
RPS28-204ENST00000602140 ZNF157P51786 506 aaPredicted RBP16.8■□□□□ 0.28
RPS28-204ENST00000602140 EXOSC9Q06265 439 aaKnown RBP16.8■□□□□ 0.28
RPS28-204ENST00000602140 FAM161AQ3B820 660 aa16.8■□□□□ 0.28
RPS28-204ENST00000602140 TXNRD3Q86VQ6 643 aa16.8■□□□□ 0.28
RPS28-204ENST00000602140 LINS1Q8NG48 757 aa16.8■□□□□ 0.28
RPS28-204ENST00000602140 FBXW7Q969H0 707 aa16.8■□□□□ 0.28
RPS28-204ENST00000602140 CCDC102AQ96A19 550 aa16.8■□□□□ 0.28
RPS28-204ENST00000602140 MXD3Q9BW11 206 aa16.8■□□□□ 0.28
RPS28-204ENST00000602140 LEMD3Q9Y2U8 911 aa16.8■□□□□ 0.28
RPS28-204ENST00000602140 CSF1RP07333 972 aa16.79■□□□□ 0.28
RPS28-204ENST00000602140 DACT2Q5SW24 774 aa16.79■□□□□ 0.28
RPS28-204ENST00000602140 MPHOSPH8Q99549 860 aa16.79■□□□□ 0.28
RPS28-204ENST00000602140 COA1Q9GZY4 146 aa16.79■□□□□ 0.28
RPS28-204ENST00000602140 ZNF804BA4D1E1 1349 aa16.78■□□□□ 0.28
RPS28-204ENST00000602140 PITPNM2Q9BZ72 1349 aa16.78■□□□□ 0.28
RPS28-204ENST00000602140 ZEB1P37275 1124 aaPredicted RBP16.78■□□□□ 0.28
RPS28-204ENST00000602140 KIF23Q02241 960 aaPredicted RBP16.78■□□□□ 0.28
RPS28-204ENST00000602140 ANKRD2Q9GZV1 360 aa16.78■□□□□ 0.28
RPS28-204ENST00000602140 SCAF8Q9UPN6 1271 aaKnown RBP16.78■□□□□ 0.28
RPS28-204ENST00000602140 ZNF316A6NFI3 1004 aaPredicted RBP16.77■□□□□ 0.28
RPS28-204ENST00000602140 F6X3S4 739 aa16.77■□□□□ 0.28
RPS28-204ENST00000602140 KLRK1P26718 216 aa16.77■□□□□ 0.28
RPS28-204ENST00000602140 NBPF9Q3BBW0 867 aa16.77■□□□□ 0.28
RPS28-204ENST00000602140 STRIP1Q5VSL9 837 aa16.77■□□□□ 0.28
RPS28-204ENST00000602140 OGFOD1Q8N543 542 aa16.77■□□□□ 0.28
RPS28-204ENST00000602140 MYO3BQ8WXR4 1341 aa16.76■□□□□ 0.27
RPS28-204ENST00000602140 CCDC85CA6NKD9 419 aa16.76■□□□□ 0.27
RPS28-204ENST00000602140 SLC10A3P09131 477 aa16.76■□□□□ 0.27
RPS28-204ENST00000602140 CHRNDQ07001 517 aa16.76■□□□□ 0.27
RPS28-204ENST00000602140 TTLL5Q6EMB2 1281 aa16.76■□□□□ 0.27
RPS28-204ENST00000602140 SPINK5Q9NQ38 1064 aaPredicted RBP16.76■□□□□ 0.27
RPS28-204ENST00000602140 ANKRD18BA2A2Z9 1011 aa16.75■□□□□ 0.27
RPS28-204ENST00000602140 KCNJ4P48050 445 aa16.75■□□□□ 0.27
RPS28-204ENST00000602140 MCOLN1Q9GZU1 580 aa16.75■□□□□ 0.27
RPS28-204ENST00000602140 WNT10BO00744 389 aa16.74■□□□□ 0.27
RPS28-204ENST00000602140 FKBP1BP68106 108 aa16.74■□□□□ 0.27
RPS28-204ENST00000602140 FOXO4P98177 505 aa16.74■□□□□ 0.27
RPS28-204ENST00000602140 BEND3Q5T5X7 828 aa16.74■□□□□ 0.27
RPS28-204ENST00000602140 PRAMEF18Q5VWM3 479 aa16.74■□□□□ 0.27
RPS28-204ENST00000602140 CHMP3Q9Y3E7 222 aa16.74■□□□□ 0.27
RPS28-204ENST00000602140 CACNA1FO60840 1977 aa16.74■□□□□ 0.27
RPS28-204ENST00000602140 CASP8AP2Q9UKL3 1982 aa16.74■□□□□ 0.27
RPS28-204ENST00000602140 ZNF646O15015 1829 aaPredicted RBP16.74■□□□□ 0.27
RPS28-204ENST00000602140 SNAP23O00161 211 aa16.73■□□□□ 0.27
RPS28-204ENST00000602140 TAF5LO75529 589 aa16.73■□□□□ 0.27
RPS28-204ENST00000602140 TRPA1O75762 1119 aa16.73■□□□□ 0.27
RPS28-204ENST00000602140 SASH1O94885 1247 aa16.73■□□□□ 0.27
RPS28-204ENST00000602140 GTF2IP78347 998 aa16.73■□□□□ 0.27
RPS28-204ENST00000602140 IFIT5Q13325 482 aaKnown RBP16.73■□□□□ 0.27
RPS28-204ENST00000602140 DGKZQ13574 1117 aa16.73■□□□□ 0.27
RPS28-204ENST00000602140 MOB2Q70IA6 237 aa16.73■□□□□ 0.27
RPS28-204ENST00000602140 RASAL3Q86YV0 1011 aa16.73■□□□□ 0.27
RPS28-204ENST00000602140 KIAA0825Q8IV33 1275 aa16.73■□□□□ 0.27
RPS28-204ENST00000602140 FAM9BQ8IZU0 186 aa16.73■□□□□ 0.27
RPS28-204ENST00000602140 HELBQ8NG08 1087 aaPredicted RBP16.73■□□□□ 0.27
RPS28-204ENST00000602140 CSRNP1Q96S65 589 aa16.73■□□□□ 0.27
RPS28-204ENST00000602140 RNF186Q9NXI6 227 aa16.73■□□□□ 0.27
RPS28-204ENST00000602140 SAGE1Q9NXZ1 904 aa16.73■□□□□ 0.27
RPS28-204ENST00000602140 PAPPA2Q9BXP8 1791 aa16.72■□□□□ 0.27
RPS28-204ENST00000602140 MMP14P50281 582 aa16.72■□□□□ 0.27
RPS28-204ENST00000602140 CD209Q9NNX6 404 aa16.72■□□□□ 0.27
RPS28-204ENST00000602140 HDAC9Q9UKV0 1011 aa16.72■□□□□ 0.27
RPS28-204ENST00000602140 UBE2Q2LH0YL09 131 aa16.71■□□□□ 0.27
RPS28-204ENST00000602140 TTLL12Q14166 644 aaPredicted RBP16.71■□□□□ 0.27
RPS28-204ENST00000602140 EPHA10Q5JZY3 1008 aa16.71■□□□□ 0.27
RPS28-204ENST00000602140 LMBR1LQ6UX01 489 aa16.71■□□□□ 0.27
RPS28-204ENST00000602140 GRM8O00222 908 aa16.7■□□□□ 0.26
RPS28-204ENST00000602140 IRS2Q9Y4H2 1338 aa16.7■□□□□ 0.26
RPS28-204ENST00000602140 NF2P35240 595 aa16.69■□□□□ 0.26
RPS28-204ENST00000602140 CCDC57Q2TAC2 916 aa16.69■□□□□ 0.26
RPS28-204ENST00000602140 TAF7LQ5H9L4 462 aa16.69■□□□□ 0.26
RPS28-204ENST00000602140 SLC4A10Q6U841 1118 aa16.69■□□□□ 0.26
RPS28-204ENST00000602140 C15orf52Q6ZUT6 534 aaKnown RBP16.69■□□□□ 0.26
RPS28-204ENST00000602140 REM2Q8IYK8 340 aaPredicted RBP16.69■□□□□ 0.26
RPS28-204ENST00000602140 ZNF594Q96JF6 807 aaPredicted RBP16.69■□□□□ 0.26
RPS28-204ENST00000602140 C9orf78Q9NZ63 289 aaPredicted RBP16.69■□□□□ 0.26
RPS28-204ENST00000602140 PLIN1O60240 522 aa16.68■□□□□ 0.26
RPS28-204ENST00000602140 LDHAL6AQ6ZMR3 332 aa16.68■□□□□ 0.26
RPS28-204ENST00000602140 ZNF804AQ7Z570 1209 aa16.68■□□□□ 0.26
RPS28-204ENST00000602140 APOBEC3FQ8IUX4 373 aaKnown RBP16.68■□□□□ 0.26
RPS28-204ENST00000602140 CERS5Q8N5B7 392 aa16.68■□□□□ 0.26
RPS28-204ENST00000602140 ZBED3Q96IU2 234 aaPredicted RBP16.68■□□□□ 0.26
RPS28-204ENST00000602140 AKAP11Q9UKA4 1901 aa16.67■□□□□ 0.26
RPS28-204ENST00000602140 ALDH1L1O75891 902 aa16.67■□□□□ 0.26
RPS28-204ENST00000602140 DLGAP5Q15398 846 aa16.67■□□□□ 0.26
RPS28-204ENST00000602140 SRCIN1Q9C0H9 1055 aa16.67■□□□□ 0.26
RPS28-204ENST00000602140 CNNM1Q9NRU3 951 aa16.67■□□□□ 0.26
RPS28-204ENST00000602140 IL1R1P14778 569 aa16.66■□□□□ 0.26
RPS28-204ENST00000602140 RGS19P49795 217 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms