RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 LEMD3Q9Y2U8 911 aa17.96■□□□□ 0.47
SHKBP1-211ENST00000595945 ATP6V0A2Q9Y487 856 aa17.96■□□□□ 0.47
SHKBP1-211ENST00000595945 DUOX1Q9NRD9 1551 aa17.96■□□□□ 0.46
SHKBP1-211ENST00000595945 MAP4K4O95819 1239 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-211ENST00000595945 PTGER2P43116 358 aa17.95■□□□□ 0.46
SHKBP1-211ENST00000595945 PHKA1P46020 1223 aa17.95■□□□□ 0.46
SHKBP1-211ENST00000595945 GORABQ5T7V8 394 aa17.95■□□□□ 0.46
SHKBP1-211ENST00000595945 CCDC102BQ68D86 513 aa17.95■□□□□ 0.46
SHKBP1-211ENST00000595945 C15orf52Q6ZUT6 534 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-211ENST00000595945 CNTROBQ8N137 903 aa17.95■□□□□ 0.46
SHKBP1-211ENST00000595945 EVI5LQ96CN4 794 aa17.95■□□□□ 0.46
SHKBP1-211ENST00000595945 ZNF804BA4D1E1 1349 aa17.95■□□□□ 0.46
SHKBP1-211ENST00000595945 UQCRFS1P1P0C7P4 283 aa17.94■□□□□ 0.46
SHKBP1-211ENST00000595945 CNKSR1Q969H4 720 aa17.94■□□□□ 0.46
SHKBP1-211ENST00000595945 ZNF622Q969S3 477 aaKnown RBP eCLIP17.94■□□□□ 0.462e-8■□□□□ 10.5
SHKBP1-211ENST00000595945 RILPL2Q969X0 211 aa17.94■□□□□ 0.46
SHKBP1-211ENST00000595945 RFX7Q2KHR2 1363 aa17.93■□□□□ 0.46
SHKBP1-211ENST00000595945 KCNA3P22001 575 aa17.93■□□□□ 0.46
SHKBP1-211ENST00000595945 ATP2B4P23634 1241 aa17.93■□□□□ 0.46
SHKBP1-211ENST00000595945 KLRK1P26718 216 aa17.93■□□□□ 0.46
SHKBP1-211ENST00000595945 SCARF1Q14162 830 aa17.93■□□□□ 0.46
SHKBP1-211ENST00000595945 FBXO33Q7Z6M2 555 aa17.93■□□□□ 0.46
SHKBP1-211ENST00000595945 CHD4Q14839 1912 aa17.92■□□□□ 0.46
SHKBP1-211ENST00000595945 SNED1Q8TER0 1413 aa17.92■□□□□ 0.46
SHKBP1-211ENST00000595945 SEC24BO95487 1268 aa17.92■□□□□ 0.46
SHKBP1-211ENST00000595945 CHMLP26374 656 aa17.92■□□□□ 0.46
SHKBP1-211ENST00000595945 MCAMP43121 646 aa17.92■□□□□ 0.46
SHKBP1-211ENST00000595945 KCNJ4P48050 445 aa17.92■□□□□ 0.46
SHKBP1-211ENST00000595945 BCAMP50895 628 aa17.92■□□□□ 0.46
SHKBP1-211ENST00000595945 PRPF40BQ6NWY9 871 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-211ENST00000595945 TICAM2Q86XR7 235 aa17.92■□□□□ 0.46
SHKBP1-211ENST00000595945 C7orf43Q8WVR3 580 aa17.92■□□□□ 0.46
SHKBP1-211ENST00000595945 EDC3Q96F86 508 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-211ENST00000595945 FAM84BQ96KN1 310 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-211ENST00000595945 ANKIB1Q9P2G1 1089 aa17.92■□□□□ 0.46
SHKBP1-211ENST00000595945 DPEP1P16444 411 aa17.91■□□□□ 0.46
SHKBP1-211ENST00000595945 GYG1P46976 350 aa17.91■□□□□ 0.46
SHKBP1-211ENST00000595945 TGFB2P61812 414 aa17.91■□□□□ 0.46
SHKBP1-211ENST00000595945 DNAJC2Q99543 621 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-211ENST00000595945 PAG1Q9NWQ8 432 aa17.91■□□□□ 0.46
SHKBP1-211ENST00000595945 NDUFB9Q9Y6M9 179 aa17.91■□□□□ 0.46
SHKBP1-211ENST00000595945 ZAP70P43403 619 aa17.9■□□□□ 0.46
SHKBP1-211ENST00000595945 RASGRF1Q13972 1273 aa17.9■□□□□ 0.46
SHKBP1-211ENST00000595945 TXNRD3Q86VQ6 643 aa17.9■□□□□ 0.46
SHKBP1-211ENST00000595945 TBC1D16Q8TBP0 767 aa17.9■□□□□ 0.46
SHKBP1-211ENST00000595945 HMG20BQ9P0W2 317 aa17.9■□□□□ 0.46
SHKBP1-211ENST00000595945 POLLQ9UGP5 575 aa17.9■□□□□ 0.46
SHKBP1-211ENST00000595945 GGA1Q9UJY5 639 aa17.9■□□□□ 0.46
SHKBP1-211ENST00000595945 NSFL1CQ9UNZ2 370 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-211ENST00000595945 COL1A1P02452 1464 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-211ENST00000595945 UFL1O94874 794 aa17.89■□□□□ 0.45
SHKBP1-211ENST00000595945 CAVIN4Q5BKX8 364 aa17.89■□□□□ 0.45
SHKBP1-211ENST00000595945 OLFM4Q6UX06 510 aa17.89■□□□□ 0.45
SHKBP1-211ENST00000595945 PI16Q6UXB8 463 aa17.89■□□□□ 0.45
SHKBP1-211ENST00000595945 KBTBD3Q8NAB2 608 aa17.89■□□□□ 0.45
SHKBP1-211ENST00000595945 SNRKQ9NRH2 765 aa17.89■□□□□ 0.45
SHKBP1-211ENST00000595945 CD2APQ9Y5K6 639 aa17.89■□□□□ 0.45
SHKBP1-211ENST00000595945 MED23Q9ULK4 1368 aa17.89■□□□□ 0.45
SHKBP1-211ENST00000595945 A0A0G2JLW4 131 aa17.88■□□□□ 0.45
SHKBP1-211ENST00000595945 GOLIM4O00461 696 aa17.88■□□□□ 0.45
SHKBP1-211ENST00000595945 SEMA3EO15041 775 aa17.88■□□□□ 0.45
SHKBP1-211ENST00000595945 CASC1Q6TDU7 716 aa17.88■□□□□ 0.45
SHKBP1-211ENST00000595945 MPNDQ8N594 471 aa17.88■□□□□ 0.45
SHKBP1-211ENST00000595945 TTLL6Q8N841 843 aa17.88■□□□□ 0.45
SHKBP1-211ENST00000595945 ESYT1Q9BSJ8 1104 aa17.88■□□□□ 0.45
SHKBP1-211ENST00000595945 FSD1Q9BTV5 496 aa17.88■□□□□ 0.45
SHKBP1-211ENST00000595945 ANTXR1Q9H6X2 564 aa17.88■□□□□ 0.45
SHKBP1-211ENST00000595945 GNL3LQ9NVN8 582 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-211ENST00000595945 PDS5AQ29RF7 1337 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-211ENST00000595945 ARFGEF1Q9Y6D6 1849 aa17.87■□□□□ 0.45
SHKBP1-211ENST00000595945 CCDC88AQ3V6T2 1871 aa17.87■□□□□ 0.45
SHKBP1-211ENST00000595945 HIP1O00291 1037 aa17.87■□□□□ 0.45
SHKBP1-211ENST00000595945 CYP2E1P05181 493 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-211ENST00000595945 HIBADHP31937 336 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-211ENST00000595945 CC2D2BQ6DHV5 1058 aa17.87■□□□□ 0.45
SHKBP1-211ENST00000595945 SPATA5Q8NB90 893 aa17.87■□□□□ 0.45
SHKBP1-211ENST00000595945 RTFDC1Q9BY42 306 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-211ENST00000595945 FER1L6Q2WGJ9 1857 aa17.86■□□□□ 0.45
SHKBP1-211ENST00000595945 EIF5BO60841 1220 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-211ENST00000595945 FKBP4Q02790 459 aaKnown RBP eCLIP17.86■□□□□ 0.45
SHKBP1-211ENST00000595945 GPR101Q96P66 508 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-211ENST00000595945 SPON1Q9HCB6 807 aa17.86■□□□□ 0.45
SHKBP1-211ENST00000595945 TTF1Q15361 905 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-211ENST00000595945 DPP8Q6V1X1 898 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-211ENST00000595945 TDRD7Q8NHU6 1098 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-211ENST00000595945 IL25Q9H293 177 aa17.85■□□□□ 0.45
SHKBP1-211ENST00000595945 PIH1D3Q9NQM4 214 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-211ENST00000595945 DIAPH3Q9NSV4 1193 aa17.85■□□□□ 0.45
SHKBP1-211ENST00000595945 DENND2AQ9ULE3 1009 aa17.85■□□□□ 0.45
SHKBP1-211ENST00000595945 ZNF646O15015 1829 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-211ENST00000595945 MAST2Q6P0Q8 1798 aa17.84■□□□□ 0.45
SHKBP1-211ENST00000595945 C6orf229H3BNL8 230 aa17.84■□□□□ 0.45
SHKBP1-211ENST00000595945 SGSM2O43147 1006 aa17.84■□□□□ 0.45
SHKBP1-211ENST00000595945 NMIQ13287 307 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-211ENST00000595945 GRIPAP1Q4V328 841 aa17.84■□□□□ 0.45
SHKBP1-211ENST00000595945 ZNF804AQ7Z570 1209 aa17.84■□□□□ 0.45
SHKBP1-211ENST00000595945 VPS37DQ86XT2 251 aa17.84■□□□□ 0.45
SHKBP1-211ENST00000595945 TMX4Q9H1E5 349 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-211ENST00000595945 RAD50Q92878 1312 aa17.83■□□□□ 0.44
SHKBP1-211ENST00000595945 IL1R1P14778 569 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms