RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 SASH1O94885 1247 aa11.97□□□□□ -0.49
DDX39A-220ENST00000593008 KLRK1P26718 216 aa11.97□□□□□ -0.49
DDX39A-220ENST00000593008 IGHMBP2P38935 993 aaKnown RBP11.97□□□□□ -0.49
DDX39A-220ENST00000593008 HDAC1Q13547 482 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-220ENST00000593008 BSDC1Q9NW68 430 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-220ENST00000593008 HACL1Q9UJ83 578 aa11.97□□□□□ -0.49
DDX39A-220ENST00000593008 GGA1Q9UJY5 639 aa11.97□□□□□ -0.49
DDX39A-220ENST00000593008 MINPP1Q9UNW1 487 aa11.97□□□□□ -0.49
DDX39A-220ENST00000593008 EYA2O00167 538 aa11.96□□□□□ -0.49
DDX39A-220ENST00000593008 EPHX2P34913 555 aa11.96□□□□□ -0.49
DDX39A-220ENST00000593008 EPS15P42566 896 aa11.96□□□□□ -0.49
DDX39A-220ENST00000593008 SCNN1DP51172 638 aa11.96□□□□□ -0.49
DDX39A-220ENST00000593008 HTRA3P83110 453 aa11.96□□□□□ -0.49
DDX39A-220ENST00000593008 TFCP2Q12800 502 aa11.96□□□□□ -0.49
DDX39A-220ENST00000593008 FSTL1Q12841 308 aa11.96□□□□□ -0.49
DDX39A-220ENST00000593008 EYA3Q99504 573 aa11.96□□□□□ -0.49
DDX39A-220ENST00000593008 MPHOSPH8Q99549 860 aa11.96□□□□□ -0.49
DDX39A-220ENST00000593008 ZC3H12CQ9C0D7 883 aaKnown RBP11.96□□□□□ -0.49
DDX39A-220ENST00000593008 CHMP4BQ9H444 224 aaKnown RBP11.96□□□□□ -0.49
DDX39A-220ENST00000593008 IL1RAPL2Q9NP60 686 aa11.96□□□□□ -0.49
DDX39A-220ENST00000593008 KCNQ5Q9NR82 932 aa11.96□□□□□ -0.49
DDX39A-220ENST00000593008 CNNM1Q9NRU3 951 aa11.96□□□□□ -0.49
DDX39A-220ENST00000593008 PODXL2Q9NZ53 605 aa11.96□□□□□ -0.49
DDX39A-220ENST00000593008 XDHP47989 1333 aa11.95□□□□□ -0.5
DDX39A-220ENST00000593008 G3V3G9 751 aa11.95□□□□□ -0.5
DDX39A-220ENST00000593008 ECE2O60344 883 aa11.95□□□□□ -0.5
DDX39A-220ENST00000593008 LMOD1P29536 600 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-220ENST00000593008 GMPSP49915 693 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-220ENST00000593008 CHRNDQ07001 517 aa11.95□□□□□ -0.5
DDX39A-220ENST00000593008 DCAF8Q5TAQ9 597 aa11.95□□□□□ -0.5
DDX39A-220ENST00000593008 CIAPIN1Q6FI81 312 aa11.95□□□□□ -0.5
DDX39A-220ENST00000593008 LDHAL6AQ6ZMR3 332 aa11.95□□□□□ -0.5
DDX39A-220ENST00000593008 VGLL2Q8N8G2 317 aa11.95□□□□□ -0.5
DDX39A-220ENST00000593008 OTUD7AQ8TE49 926 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-220ENST00000593008 DCTPP1Q9H773 170 aa11.95□□□□□ -0.5
DDX39A-220ENST00000593008 TLR7Q9NYK1 1049 aaKnown RBP11.95□□□□□ -0.5
DDX39A-220ENST00000593008 CLEC11AQ9Y240 323 aa11.95□□□□□ -0.5
DDX39A-220ENST00000593008 RIPOR2Q9Y4F9 1068 aa11.95□□□□□ -0.5
DDX39A-220ENST00000593008 ZNF609O15014 1411 aa11.94□□□□□ -0.5
DDX39A-220ENST00000593008 HMMRO75330 724 aa11.94□□□□□ -0.5
DDX39A-220ENST00000593008 ATP2B4P23634 1241 aa11.94□□□□□ -0.5
DDX39A-220ENST00000593008 ADORA1P30542 326 aa11.94□□□□□ -0.5
DDX39A-220ENST00000593008 OS9Q13438 667 aaPredicted RBP11.94□□□□□ -0.5
DDX39A-220ENST00000593008 TNIP1Q15025 636 aa11.94□□□□□ -0.5
DDX39A-220ENST00000593008 CHADLQ6NUI6 762 aa11.94□□□□□ -0.5
DDX39A-220ENST00000593008 CCDC136Q96JN2 1154 aa11.94□□□□□ -0.5
DDX39A-220ENST00000593008 PPP4R2Q9NY27 417 aa11.94□□□□□ -0.5
DDX39A-220ENST00000593008 HDAC5Q9UQL6 1122 aa11.94□□□□□ -0.5
DDX39A-220ENST00000593008 NOP58Q9Y2X3 529 aaKnown RBP11.94□□□□□ -0.5
DDX39A-220ENST00000593008 ZBTB12Q9Y330 459 aaPredicted RBP11.94□□□□□ -0.5
DDX39A-220ENST00000593008 SHTN1A0MZ66 631 aa11.93□□□□□ -0.5
DDX39A-220ENST00000593008 PSMD14O00487 310 aa11.93□□□□□ -0.5
DDX39A-220ENST00000593008 APLP1P51693 650 aa11.93□□□□□ -0.5
DDX39A-220ENST00000593008 METTL24Q5JXM2 366 aa11.93□□□□□ -0.5
DDX39A-220ENST00000593008 TSHZ3Q63HK5 1081 aa11.93□□□□□ -0.5
DDX39A-220ENST00000593008 LDHDQ86WU2 507 aa11.93□□□□□ -0.5
DDX39A-220ENST00000593008 GPRC5DQ9NZD1 345 aa11.93□□□□□ -0.5
DDX39A-220ENST00000593008 CIAO1O76071 339 aa11.92□□□□□ -0.5
DDX39A-220ENST00000593008 G3BP1Q13283 466 aaKnown RBP eCLIP11.92□□□□□ -0.5
DDX39A-220ENST00000593008 AAMPQ13685 434 aa11.92□□□□□ -0.5
DDX39A-220ENST00000593008 MAP1SQ66K74 1059 aaPredicted RBP11.92□□□□□ -0.5
DDX39A-220ENST00000593008 PNMA8AQ86V59 439 aaPredicted RBP11.92□□□□□ -0.5
DDX39A-220ENST00000593008 TXNRD3Q86VQ6 643 aa11.92□□□□□ -0.5
DDX39A-220ENST00000593008 SMC5Q8IY18 1101 aa11.92□□□□□ -0.5
DDX39A-220ENST00000593008 RHPN1Q8TCX5 695 aa11.92□□□□□ -0.5
DDX39A-220ENST00000593008 RWDD1Q9H446 243 aaPredicted RBP11.92□□□□□ -0.5
DDX39A-220ENST00000593008 IRS2Q9Y4H2 1338 aa11.91□□□□□ -0.5
DDX39A-220ENST00000593008 PDE4AP27815 886 aa11.91□□□□□ -0.5
DDX39A-220ENST00000593008 IL15P40933 162 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-220ENST00000593008 KCNJ4P48050 445 aa11.91□□□□□ -0.5
DDX39A-220ENST00000593008 IFFO2Q5TF58 517 aa11.91□□□□□ -0.5
DDX39A-220ENST00000593008 EAF2Q96CJ1 260 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-220ENST00000593008 LNPKQ9C0E8 428 aa11.91□□□□□ -0.5
DDX39A-220ENST00000593008 ANKRD2Q9GZV1 360 aa11.91□□□□□ -0.5
DDX39A-220ENST00000593008 CCDC8Q9H0W5 538 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-220ENST00000593008 ARAP2Q8WZ64 1704 aa11.91□□□□□ -0.5
DDX39A-220ENST00000593008 ZNF804BA4D1E1 1349 aa11.9□□□□□ -0.5
DDX39A-220ENST00000593008 TNNI3KQ59H18 835 aa11.9□□□□□ -0.5
DDX39A-220ENST00000593008 ANKRD45Q5TZF3 282 aa11.9□□□□□ -0.5
DDX39A-220ENST00000593008 MICALL2Q8IY33 904 aa11.9□□□□□ -0.5
DDX39A-220ENST00000593008 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
DDX39A-220ENST00000593008 DBNDD2Q9BQY9 259 aa11.9□□□□□ -0.5
DDX39A-220ENST00000593008 ADARB2Q9NS39 739 aaKnown RBP11.9□□□□□ -0.5
DDX39A-220ENST00000593008 CNOT7Q9UIV1 285 aaKnown RBP11.9□□□□□ -0.5
DDX39A-220ENST00000593008 LEMD3Q9Y2U8 911 aa11.9□□□□□ -0.5
DDX39A-220ENST00000593008 FPGT-TNNI3KV9GXZ4 949 aa11.9□□□□□ -0.5
DDX39A-220ENST00000593008 COL1A1P02452 1464 aaPredicted RBP11.89□□□□□ -0.51
DDX39A-220ENST00000593008 MROH5Q6ZUA9 1318 aa11.89□□□□□ -0.51
DDX39A-220ENST00000593008 SCN4AP35499 1836 aa11.89□□□□□ -0.51
DDX39A-220ENST00000593008 A0A1B0GUL7 405 aa11.89□□□□□ -0.51
DDX39A-220ENST00000593008 PDE8BO95263 885 aa11.89□□□□□ -0.51
DDX39A-220ENST00000593008 FGFR2P21802 821 aa11.89□□□□□ -0.51
DDX39A-220ENST00000593008 TIMM10P62072 90 aa11.89□□□□□ -0.51
DDX39A-220ENST00000593008 ATP2B3Q16720 1220 aa11.89□□□□□ -0.51
DDX39A-220ENST00000593008 AACSQ86V21 672 aa11.89□□□□□ -0.51
DDX39A-220ENST00000593008 CNTROBQ8N137 903 aa11.89□□□□□ -0.51
DDX39A-220ENST00000593008 TRPM4Q8TD43 1214 aa11.89□□□□□ -0.51
DDX39A-220ENST00000593008 LRRCC1Q9C099 1032 aa11.89□□□□□ -0.51
DDX39A-220ENST00000593008 DBNLQ9UJU6 430 aaKnown RBP11.89□□□□□ -0.51
DDX39A-220ENST00000593008 MED23Q9ULK4 1368 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms