RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ALDH1B1P30837 517 aa27.04■■□□□ 1.92
ATG4D-209ENST00000588857 C2CD5Q86YS7 1000 aa27.04■■□□□ 1.92
ATG4D-209ENST00000588857 GRIN3BO60391 1043 aa27.03■■□□□ 1.92
ATG4D-209ENST00000588857 ANKIB1Q9P2G1 1089 aa27.03■■□□□ 1.92
ATG4D-209ENST00000588857 CACNA1SQ13698 1873 aa27.02■■□□□ 1.92
ATG4D-209ENST00000588857 A0A0G2JLW4 131 aa27.02■■□□□ 1.92
ATG4D-209ENST00000588857 UQCRFS1P1P0C7P4 283 aa27.02■■□□□ 1.92
ATG4D-209ENST00000588857 YY1P25490 414 aa27.02■■□□□ 1.92
ATG4D-209ENST00000588857 CHMLP26374 656 aa27.02■■□□□ 1.92
ATG4D-209ENST00000588857 CCDC102BQ68D86 513 aa27.02■■□□□ 1.92
ATG4D-209ENST00000588857 ZNF512BQ96KM6 892 aaPredicted RBP27.02■■□□□ 1.92
ATG4D-209ENST00000588857 MFAP1P55081 439 aaKnown RBP27.01■■□□□ 1.92
ATG4D-209ENST00000588857 AKAP11Q9UKA4 1901 aa27.01■■□□□ 1.91
ATG4D-209ENST00000588857 PPEF1O14829 653 aaPredicted RBP27.01■■□□□ 1.91
ATG4D-209ENST00000588857 ZNF622Q969S3 477 aaKnown RBP eCLIP27.01■■□□□ 1.91
ATG4D-209ENST00000588857 FSD1Q9BTV5 496 aa27.01■■□□□ 1.91
ATG4D-209ENST00000588857 PAG1Q9NWQ8 432 aa27.01■■□□□ 1.91
ATG4D-209ENST00000588857 XDHP47989 1333 aa27■■□□□ 1.91
ATG4D-209ENST00000588857 DPEP1P16444 411 aa27■■□□□ 1.91
ATG4D-209ENST00000588857 PHKA1P46020 1223 aa27■■□□□ 1.91
ATG4D-209ENST00000588857 NDUFB9Q9Y6M9 179 aa27■■□□□ 1.91
ATG4D-209ENST00000588857 ZNF804BA4D1E1 1349 aa26.99■■□□□ 1.91
ATG4D-209ENST00000588857 HIP1O00291 1037 aa26.99■■□□□ 1.91
ATG4D-209ENST00000588857 FKBP4Q02790 459 aaKnown RBP eCLIP26.99■■□□□ 1.91
ATG4D-209ENST00000588857 CAVIN4Q5BKX8 364 aa26.99■■□□□ 1.91
ATG4D-209ENST00000588857 STYK1Q6J9G0 422 aa26.99■■□□□ 1.91
ATG4D-209ENST00000588857 DIAPH3Q9NSV4 1193 aa26.99■■□□□ 1.91
ATG4D-209ENST00000588857 WWC3Q9ULE0 1092 aa26.99■■□□□ 1.91
ATG4D-209ENST00000588857 LRRC37AA6NMS7 1700 aa26.99■■□□□ 1.91
ATG4D-209ENST00000588857 GOLIM4O00461 696 aa26.98■■□□□ 1.91
ATG4D-209ENST00000588857 ARID4AP29374 1257 aaPredicted RBP26.98■■□□□ 1.91
ATG4D-209ENST00000588857 EDC3Q96F86 508 aaKnown RBP26.98■■□□□ 1.91
ATG4D-209ENST00000588857 LEMD3Q9Y2U8 911 aa26.98■■□□□ 1.91
ATG4D-209ENST00000588857 KCNA3P22001 575 aa26.97■■□□□ 1.91
ATG4D-209ENST00000588857 SP8Q8IXZ3 490 aa26.97■■□□□ 1.91
ATG4D-209ENST00000588857 TMX4Q9H1E5 349 aaPredicted RBP26.97■■□□□ 1.91
ATG4D-209ENST00000588857 SNRKQ9NRH2 765 aa26.97■■□□□ 1.91
ATG4D-209ENST00000588857 GNL3LQ9NVN8 582 aaKnown RBP26.97■■□□□ 1.91
ATG4D-209ENST00000588857 BCAMP50895 628 aa26.97■■□□□ 1.91
ATG4D-209ENST00000588857 VPS37DQ86XT2 251 aa26.97■■□□□ 1.91
ATG4D-209ENST00000588857 ESYT1Q9BSJ8 1104 aa26.97■■□□□ 1.91
ATG4D-209ENST00000588857 NSFL1CQ9UNZ2 370 aaKnown RBP26.97■■□□□ 1.91
ATG4D-209ENST00000588857 ATP6V0A2Q9Y487 856 aa26.97■■□□□ 1.91
ATG4D-209ENST00000588857 WTIPA6NIX2 430 aaPredicted RBP26.96■■□□□ 1.91
ATG4D-209ENST00000588857 MCAMP43121 646 aa26.96■■□□□ 1.91
ATG4D-209ENST00000588857 GPSM2P81274 684 aa26.96■■□□□ 1.91
ATG4D-209ENST00000588857 SCARF1Q14162 830 aa26.96■■□□□ 1.91
ATG4D-209ENST00000588857 KIF13BQ9NQT8 1826 aa26.95■■□□□ 1.91
ATG4D-209ENST00000588857 CHRNA5P30532 468 aa26.95■■□□□ 1.9
ATG4D-209ENST00000588857 GYG1P46976 350 aa26.95■■□□□ 1.9
ATG4D-209ENST00000588857 KBTBD3Q8NAB2 608 aa26.95■■□□□ 1.9
ATG4D-209ENST00000588857 RUFY2Q8WXA3 655 aa26.95■■□□□ 1.9
ATG4D-209ENST00000588857 REC8O95072 547 aa26.94■■□□□ 1.9
ATG4D-209ENST00000588857 ATP2B4P23634 1241 aa26.94■■□□□ 1.9
ATG4D-209ENST00000588857 ZAP70P43403 619 aa26.94■■□□□ 1.9
ATG4D-209ENST00000588857 CNKSR1Q969H4 720 aa26.94■■□□□ 1.9
ATG4D-209ENST00000588857 RFX7Q2KHR2 1363 aa26.94■■□□□ 1.9
ATG4D-209ENST00000588857 DLEC1Q9Y238 1755 aa26.94■■□□□ 1.9
ATG4D-209ENST00000588857 MYH13Q9UKX3 1938 aa26.94■■□□□ 1.9
ATG4D-209ENST00000588857 TICAM2Q86XR7 235 aa26.93■■□□□ 1.9
ATG4D-209ENST00000588857 GGA1Q9UJY5 639 aa26.93■■□□□ 1.9
ATG4D-209ENST00000588857 MYH7P12883 1935 aa26.93■■□□□ 1.9
ATG4D-209ENST00000588857 TTF1Q15361 905 aaPredicted RBP26.92■■□□□ 1.9
ATG4D-209ENST00000588857 CWC27Q6UX04 472 aaKnown RBP26.92■■□□□ 1.9
ATG4D-209ENST00000588857 PI16Q6UXB8 463 aa26.92■■□□□ 1.9
ATG4D-209ENST00000588857 SLC51AQ86UW1 340 aa26.92■■□□□ 1.9
ATG4D-209ENST00000588857 SPATA5Q8NB90 893 aa26.92■■□□□ 1.9
ATG4D-209ENST00000588857 FAM84BQ96KN1 310 aaPredicted RBP26.92■■□□□ 1.9
ATG4D-209ENST00000588857 PODXL2Q9NZ53 605 aa26.92■■□□□ 1.9
ATG4D-209ENST00000588857 PIM2Q9P1W9 311 aa26.92■■□□□ 1.9
ATG4D-209ENST00000588857 UFL1O94874 794 aa26.92■■□□□ 1.9
ATG4D-209ENST00000588857 RASGRF1Q13972 1273 aa26.92■■□□□ 1.9
ATG4D-209ENST00000588857 HMG20BQ9P0W2 317 aa26.92■■□□□ 1.9
ATG4D-209ENST00000588857 BCS1LQ9Y276 419 aa26.92■■□□□ 1.9
ATG4D-209ENST00000588857 SLX4Q8IY92 1834 aa26.91■■□□□ 1.9
ATG4D-209ENST00000588857 HIBADHP31937 336 aaKnown RBP26.91■■□□□ 1.9
ATG4D-209ENST00000588857 LRRFIP1Q32MZ4 808 aaKnown RBP26.91■■□□□ 1.9
ATG4D-209ENST00000588857 ANTXR1Q9H6X2 564 aa26.91■■□□□ 1.9
ATG4D-209ENST00000588857 LTBP1Q14766 1721 aa26.9■■□□□ 1.9
ATG4D-209ENST00000588857 KLRK1P26718 216 aa26.9■■□□□ 1.9
ATG4D-209ENST00000588857 PRPF40BQ6NWY9 871 aaKnown RBP26.9■■□□□ 1.9
ATG4D-209ENST00000588857 FBXO33Q7Z6M2 555 aa26.9■■□□□ 1.9
ATG4D-209ENST00000588857 C22orf23Q9BZE7 217 aa26.9■■□□□ 1.9
ATG4D-209ENST00000588857 TBC1D32Q96NH3 1257 aa26.89■■□□□ 1.9
ATG4D-209ENST00000588857 MYO5AQ9Y4I1 1855 aaKnown RBP26.89■■□□□ 1.89
ATG4D-209ENST00000588857 SGSM2O43147 1006 aa26.88■■□□□ 1.89
ATG4D-209ENST00000588857 NMIQ13287 307 aaPredicted RBP26.88■■□□□ 1.89
ATG4D-209ENST00000588857 C15orf52Q6ZUT6 534 aaKnown RBP26.88■■□□□ 1.89
ATG4D-209ENST00000588857 MPNDQ8N594 471 aa26.88■■□□□ 1.89
ATG4D-209ENST00000588857 KIAA1551Q9HCM1 1747 aa26.88■■□□□ 1.89
ATG4D-209ENST00000588857 C6orf229H3BNL8 230 aa26.88■■□□□ 1.89
ATG4D-209ENST00000588857 SEMA3EO15041 775 aa26.88■■□□□ 1.89
ATG4D-209ENST00000588857 FRAT2O75474 233 aaPredicted RBP26.88■■□□□ 1.89
ATG4D-209ENST00000588857 CYP2E1P05181 493 aaPredicted RBP26.88■■□□□ 1.89
ATG4D-209ENST00000588857 TBC1D16Q8TBP0 767 aa26.88■■□□□ 1.89
ATG4D-209ENST00000588857 IRS2Q9Y4H2 1338 aa26.87■■□□□ 1.89
ATG4D-209ENST00000588857 DALRD3Q5D0E6 543 aaKnown RBP26.87■■□□□ 1.89
ATG4D-209ENST00000588857 FAM227BQ96M60 508 aa26.87■■□□□ 1.89
ATG4D-209ENST00000588857 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.87■■□□□ 1.891e-6■■■■■ 36.3
ATG4D-209ENST00000588857 DENND2AQ9ULE3 1009 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms