RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 ZNF445P59923 1031 aa14.79□□□□□ -0.04
RNF43-208ENST00000584437 NUTM2AQ8IVF1 878 aaPredicted RBP14.79□□□□□ -0.04
RNF43-208ENST00000584437 GTF3C6Q969F1 213 aa14.79□□□□□ -0.04
RNF43-208ENST00000584437 RBSNQ9H1K0 784 aa14.79□□□□□ -0.04
RNF43-208ENST00000584437 MTRF1LQ9UGC7 380 aaKnown RBP14.79□□□□□ -0.04
RNF43-208ENST00000584437 ADGRF5Q8IZF2 1346 aa14.79□□□□□ -0.04
RNF43-208ENST00000584437 KRBA2Q6ZNG9 492 aa14.79□□□□□ -0.04
RNF43-208ENST00000584437 STIM2Q9P246 746 aa14.79□□□□□ -0.04
RNF43-208ENST00000584437 ASIC1P78348 528 aa14.79□□□□□ -0.04
RNF43-208ENST00000584437 SETDB1Q15047 1291 aa14.79□□□□□ -0.04
RNF43-208ENST00000584437 POTEDQ86YR6 584 aa14.79□□□□□ -0.04
RNF43-208ENST00000584437 AFAP1L1Q8TED9 768 aa14.79□□□□□ -0.04
RNF43-208ENST00000584437 CDC5LQ99459 802 aaKnown RBP14.79□□□□□ -0.04
RNF43-208ENST00000584437 LRRC2Q9BYS8 371 aa14.79□□□□□ -0.04
RNF43-208ENST00000584437 ANKIB1Q9P2G1 1089 aa14.79□□□□□ -0.04
RNF43-208ENST00000584437 LACTBP83111 547 aaPredicted RBP14.78□□□□□ -0.04
RNF43-208ENST00000584437 GRIPAP1Q4V328 841 aa14.78□□□□□ -0.04
RNF43-208ENST00000584437 USHBP1Q8N6Y0 703 aa14.78□□□□□ -0.04
RNF43-208ENST00000584437 CFAP57Q96MR6 1250 aa14.78□□□□□ -0.04
RNF43-208ENST00000584437 SCLT1Q96NL6 688 aa14.78□□□□□ -0.04
RNF43-208ENST00000584437 UTP14AQ9BVJ6 771 aaKnown RBP14.78□□□□□ -0.04
RNF43-208ENST00000584437 USP26Q9BXU7 913 aa14.78□□□□□ -0.04
RNF43-208ENST00000584437 MAGI1Q96QZ7 1491 aaPredicted RBP14.78□□□□□ -0.04
RNF43-208ENST00000584437 KRT13P13646 458 aa14.78□□□□□ -0.04
RNF43-208ENST00000584437 DHX58Q96C10 678 aa14.78□□□□□ -0.04
RNF43-208ENST00000584437 CAPZA3Q96KX2 299 aa14.78□□□□□ -0.04
RNF43-208ENST00000584437 IGSF3O75054 1194 aa14.78□□□□□ -0.04
RNF43-208ENST00000584437 CRNKL1Q9BZJ0 848 aaKnown RBP14.78□□□□□ -0.04
RNF43-208ENST00000584437 AKR1B15C9JRZ8 316 aaPredicted RBP14.78□□□□□ -0.04
RNF43-208ENST00000584437 UBXN1Q04323 297 aa14.78□□□□□ -0.04
RNF43-208ENST00000584437 U2AF2P26368 475 aaKnown RBP eCLIP14.77□□□□□ -0.041e-8■■□□□ 13.9
RNF43-208ENST00000584437 FAM160A1Q05DH4 1040 aa14.77□□□□□ -0.04
RNF43-208ENST00000584437 TRAF1Q13077 416 aa14.77□□□□□ -0.04
RNF43-208ENST00000584437 NEK11Q8NG66 645 aa14.77□□□□□ -0.04
RNF43-208ENST00000584437 CALML3P27482 149 aa14.77□□□□□ -0.05
RNF43-208ENST00000584437 IFIT1BQ5T764 474 aaKnown RBP14.77□□□□□ -0.05
RNF43-208ENST00000584437 RUFY3Q7L099 469 aa14.77□□□□□ -0.05
RNF43-208ENST00000584437 FAM83GA6ND36 823 aa14.77□□□□□ -0.05
RNF43-208ENST00000584437 TRIM14Q14142 442 aa14.77□□□□□ -0.05
RNF43-208ENST00000584437 POLR3AO14802 1390 aaPredicted RBP14.77□□□□□ -0.05
RNF43-208ENST00000584437 RIOK3O14730 519 aaKnown RBP14.76□□□□□ -0.05
RNF43-208ENST00000584437 CALM1P0DP23 149 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 CALM2P0DP24 149 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 CALM3P0DP25 149 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 NMIQ13287 307 aaPredicted RBP14.76□□□□□ -0.05
RNF43-208ENST00000584437 FMNL3Q8IVF7 1028 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 PPFIBP2Q8ND30 876 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 ZBTB40Q9NUA8 1239 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 CREB3L3Q68CJ9 461 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 IFT74Q96LB3 600 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 TOPBP1Q92547 1522 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 PLEKHM2Q8IWE5 1019 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 ELP1O95163 1332 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 ARHGEF11O15085 1522 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 KIAA0586Q9BVV6 1533 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 CCDC160A6NGH7 325 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 ZPR1O75312 459 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 IFT81Q8WYA0 676 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 ZBTB3Q9H5J0 574 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 VAT1LQ9HCJ6 419 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 TTF2Q9UNY4 1162 aaKnown RBP14.76□□□□□ -0.05
RNF43-208ENST00000584437 PTPDC1A2A3K4 754 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 PPP1R2P41236 205 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 MAP3K9P80192 1104 aa14.76□□□□□ -0.05
RNF43-208ENST00000584437 C14orf93Q9H972 538 aaKnown RBP14.76□□□□□ -0.05
RNF43-208ENST00000584437 ANKRD13DQ6ZTN6 518 aa14.75□□□□□ -0.05
RNF43-208ENST00000584437 IMPACTQ9P2X3 320 aa14.75□□□□□ -0.05
RNF43-208ENST00000584437 SNRPA1P09661 255 aaKnown RBP14.75□□□□□ -0.05
RNF43-208ENST00000584437 CHMLP26374 656 aa14.75□□□□□ -0.05
RNF43-208ENST00000584437 IL15P40933 162 aaPredicted RBP14.75□□□□□ -0.05
RNF43-208ENST00000584437 CEP85Q6P2H3 762 aa14.75□□□□□ -0.05
RNF43-208ENST00000584437 DHX32Q7L7V1 743 aaKnown RBP14.75□□□□□ -0.05
RNF43-208ENST00000584437 C16orf71Q8IYS4 520 aaPredicted RBP14.75□□□□□ -0.05
RNF43-208ENST00000584437 JAKMIP2Q96AA8 810 aa14.75□□□□□ -0.05
RNF43-208ENST00000584437 NAPGQ99747 312 aaPredicted RBP14.75□□□□□ -0.05
RNF43-208ENST00000584437 CCDC122Q5T0U0 273 aa14.75□□□□□ -0.05
RNF43-208ENST00000584437 CCDC50Q8IVM0 306 aa14.75□□□□□ -0.05
RNF43-208ENST00000584437 COMMD10Q9Y6G5 202 aa14.75□□□□□ -0.05
RNF43-208ENST00000584437 RTL9Q8NET4 1388 aa14.75□□□□□ -0.05
RNF43-208ENST00000584437 DNAJC21Q5F1R6 531 aaKnown RBP14.74□□□□□ -0.05
RNF43-208ENST00000584437 IQUBQ8NA54 791 aa14.74□□□□□ -0.05
RNF43-208ENST00000584437 ATP5DP30049 168 aa14.74□□□□□ -0.05
RNF43-208ENST00000584437 IFNL2Q8IZJ0 200 aa14.74□□□□□ -0.05
RNF43-208ENST00000584437 ATP5J2-PTCD1G3V325 749 aa14.74□□□□□ -0.05
RNF43-208ENST00000584437 GRM8O00222 908 aa14.74□□□□□ -0.05
RNF43-208ENST00000584437 GSTO1P78417 241 aa14.74□□□□□ -0.05
RNF43-208ENST00000584437 NAA25Q14CX7 972 aa14.74□□□□□ -0.05
RNF43-208ENST00000584437 CCDC26Q8TAB7 109 aa14.74□□□□□ -0.05
RNF43-208ENST00000584437 TRIM7Q9C029 511 aa14.74□□□□□ -0.05
RNF43-208ENST00000584437 SWAP70Q9UH65 585 aa14.74□□□□□ -0.05
RNF43-208ENST00000584437 POGZQ7Z3K3 1410 aa14.73□□□□□ -0.05
RNF43-208ENST00000584437 NDUFAB1O14561 156 aa14.73□□□□□ -0.05
RNF43-208ENST00000584437 ALDH3A1P30838 453 aa14.73□□□□□ -0.05
RNF43-208ENST00000584437 INPP5BP32019 993 aa14.73□□□□□ -0.05
RNF43-208ENST00000584437 CHMP4BP1P59074 171 aa14.73□□□□□ -0.05
RNF43-208ENST00000584437 PHF8Q9UPP1 1060 aa14.73□□□□□ -0.05
RNF43-208ENST00000584437 SEC24BO95487 1268 aa14.73□□□□□ -0.05
RNF43-208ENST00000584437 CALCOCO2Q13137 446 aa14.73□□□□□ -0.05
RNF43-208ENST00000584437 MTUS1Q9ULD2 1270 aa14.73□□□□□ -0.05
RNF43-208ENST00000584437 GIGYF1O75420 1035 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms