RNA–Protein interactions for RNA: ENST00000584155.1

NUP85-225, Transcript of nucleoporin 85, human

TSL 2

Gene NUP85, Length 300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-225	ENST00000584155	LOC102724428	A0A0B4J2F2	783 aa		4.89	□□□□□ -1.63
NUP85-225	ENST00000584155	SEMA3E	O15041	775 aa		4.89	□□□□□ -1.63
NUP85-225	ENST00000584155	UPP2	O95045	317 aa		4.89	□□□□□ -1.63
NUP85-225	ENST00000584155	MMP10	P09238	476 aa		4.89	□□□□□ -1.63
NUP85-225	ENST00000584155	DPEP1	P16444	411 aa		4.89	□□□□□ -1.63
NUP85-225	ENST00000584155	TAT	P17735	454 aa	Predicted RBP	4.89	□□□□□ -1.63
NUP85-225	ENST00000584155	ITGA6	P23229	1130 aa		4.89	□□□□□ -1.63
NUP85-225	ENST00000584155	GRM5	P41594	1212 aa		4.89	□□□□□ -1.63
NUP85-225	ENST00000584155	SIK1	P57059	783 aa		4.89	□□□□□ -1.63
NUP85-225	ENST00000584155	NR5A1	Q13285	461 aa		4.89	□□□□□ -1.63
NUP85-225	ENST00000584155	ARHGAP27	Q6ZUM4	889 aa		4.89	□□□□□ -1.63
NUP85-225	ENST00000584155	VWA5B2	Q8N398	1253 aa		4.89	□□□□□ -1.63
NUP85-225	ENST00000584155	SRP68	Q9UHB9	627 aa	Known RBP	4.89	□□□□□ -1.63
NUP85-225	ENST00000584155	ADCY9	O60503	1353 aa		4.89	□□□□□ -1.63
NUP85-225	ENST00000584155	PALLD	Q8WX93	1383 aa		4.89	□□□□□ -1.63
NUP85-225	ENST00000584155	EDC4	Q6P2E9	1401 aa	Known RBP	4.89	□□□□□ -1.63
NUP85-225	ENST00000584155	TTLL8	A6PVC2	850 aa		4.88	□□□□□ -1.63
NUP85-225	ENST00000584155	PHF20L1	A8MW92	1017 aa		4.88	□□□□□ -1.63
NUP85-225	ENST00000584155	NCL	P19338	710 aa	Known RBP	4.88	□□□□□ -1.63
NUP85-225	ENST00000584155	CHRNA5	P30532	468 aa		4.88	□□□□□ -1.63
NUP85-225	ENST00000584155	FGD1	P98174	961 aa		4.88	□□□□□ -1.63
NUP85-225	ENST00000584155	SRSF11	Q05519	484 aa	Known RBP	4.88	□□□□□ -1.63
NUP85-225	ENST00000584155	KCNH2	Q12809	1159 aa		4.88	□□□□□ -1.63
NUP85-225	ENST00000584155	RBM26	Q5T8P6	1007 aa	Known RBP	4.88	□□□□□ -1.63
NUP85-225	ENST00000584155	FAM174A	Q8TBP5	190 aa		4.88	□□□□□ -1.63
NUP85-225	ENST00000584155	RAPGEF4	Q8WZA2	1011 aa		4.88	□□□□□ -1.63
NUP85-225	ENST00000584155	RRAGC	Q9HB90	399 aa		4.88	□□□□□ -1.63
NUP85-225	ENST00000584155	POLK	Q9UBT6	870 aa		4.88	□□□□□ -1.63
NUP85-225	ENST00000584155	BCS1L	Q9Y276	419 aa		4.88	□□□□□ -1.63
NUP85-225	ENST00000584155	FAM208A	Q9UK61	1670 aa	Known RBP	4.88	□□□□□ -1.63
NUP85-225	ENST00000584155	LTN1	O94822	1766 aa		4.88	□□□□□ -1.63
NUP85-225	ENST00000584155	LY75	O60449	1722 aa		4.87	□□□□□ -1.63
NUP85-225	ENST00000584155	TESPA1	A2RU30	521 aa	Predicted RBP	4.87	□□□□□ -1.63
NUP85-225	ENST00000584155	GYS1	P13807	737 aa		4.87	□□□□□ -1.63
NUP85-225	ENST00000584155	TNNT2	P45379	298 aa	Predicted RBP	4.87	□□□□□ -1.63
NUP85-225	ENST00000584155	MAP3K10	Q02779	954 aa		4.87	□□□□□ -1.63
NUP85-225	ENST00000584155	IRF5	Q13568	498 aa		4.87	□□□□□ -1.63
NUP85-225	ENST00000584155	GAS6	Q14393	721 aa		4.87	□□□□□ -1.63
NUP85-225	ENST00000584155	CCDC27	Q2M243	656 aa		4.87	□□□□□ -1.63
NUP85-225	ENST00000584155	C9orf131	Q5VYM1	1079 aa		4.87	□□□□□ -1.63
NUP85-225	ENST00000584155	ANKRD13A	Q8IZ07	590 aa		4.87	□□□□□ -1.63
NUP85-225	ENST00000584155	PKNOX2	Q96KN3	472 aa		4.87	□□□□□ -1.63
NUP85-225	ENST00000584155	TSEN34	Q9BSV6	310 aa	Known RBP	4.87	□□□□□ -1.63
NUP85-225	ENST00000584155	BRPF3	Q9ULD4	1205 aa		4.87	□□□□□ -1.63
NUP85-225	ENST00000584155	MON2	Q7Z3U7	1717 aa		4.86	□□□□□ -1.63
NUP85-225	ENST00000584155	TOMM70	O94826	608 aa		4.86	□□□□□ -1.63
NUP85-225	ENST00000584155	PHKG2	P15735	406 aa		4.86	□□□□□ -1.63
NUP85-225	ENST00000584155	TMF1	P82094	1093 aa		4.86	□□□□□ -1.63
NUP85-225	ENST00000584155	DDR1	Q08345	913 aa		4.86	□□□□□ -1.63
NUP85-225	ENST00000584155	TRAPPC3L	Q5T215	181 aa		4.86	□□□□□ -1.63
NUP85-225	ENST00000584155	SV2A	Q7L0J3	742 aa		4.86	□□□□□ -1.63
NUP85-225	ENST00000584155	KRTAP19-1	Q8IUB9	90 aa		4.86	□□□□□ -1.63
NUP85-225	ENST00000584155	FLAD1	Q8NFF5	587 aa		4.86	□□□□□ -1.63
NUP85-225	ENST00000584155	CLUAP1	Q96AJ1	413 aa		4.86	□□□□□ -1.63
NUP85-225	ENST00000584155	PCDHGC3	Q9UN70	934 aa		4.86	□□□□□ -1.63
NUP85-225	ENST00000584155	DOT1L	Q8TEK3	1739 aa		4.86	□□□□□ -1.63
NUP85-225	ENST00000584155	BTBD11	A6QL63	1104 aa		4.85	□□□□□ -1.63
NUP85-225	ENST00000584155	SPTLC1	O15269	473 aa		4.85	□□□□□ -1.63
NUP85-225	ENST00000584155	PTCD1	O75127	700 aa	Known RBP	4.85	□□□□□ -1.63
NUP85-225	ENST00000584155	ITGB7	P26010	798 aa		4.85	□□□□□ -1.63
NUP85-225	ENST00000584155	SSFA2	P28290	1259 aa		4.85	□□□□□ -1.63
NUP85-225	ENST00000584155	TM4SF1	P30408	202 aa		4.85	□□□□□ -1.63
NUP85-225	ENST00000584155	SET	Q01105	290 aa	Predicted RBP	4.85	□□□□□ -1.63
NUP85-225	ENST00000584155	KCNA1	Q09470	495 aa		4.85	□□□□□ -1.63
NUP85-225	ENST00000584155	EIF4A2	Q14240	407 aa	Known RBP	4.85	□□□□□ -1.63
NUP85-225	ENST00000584155	SMYD5	Q6GMV2	418 aa		4.85	□□□□□ -1.63
NUP85-225	ENST00000584155	INTS5	Q6P9B9	1019 aa	Known RBP	4.85	□□□□□ -1.63
NUP85-225	ENST00000584155	NFATC2IP	Q8NCF5	419 aa		4.85	□□□□□ -1.63
NUP85-225	ENST00000584155	SMARCC1	Q92922	1105 aa	Predicted RBP	4.85	□□□□□ -1.63
NUP85-225	ENST00000584155	FOXJ1	Q92949	421 aa		4.85	□□□□□ -1.63
NUP85-225	ENST00000584155	LGR6	Q9HBX8	967 aa		4.85	□□□□□ -1.63
NUP85-225	ENST00000584155	INSR	P06213	1382 aa		4.85	□□□□□ -1.63
NUP85-225	ENST00000584155	TOGARAM1	Q9Y4F4	1720 aa		4.85	□□□□□ -1.63
NUP85-225	ENST00000584155	N4BP2	Q86UW6	1770 aa	Predicted RBP	4.84	□□□□□ -1.63
NUP85-225	ENST00000584155	QSER1	Q2KHR3	1735 aa		4.84	□□□□□ -1.63
NUP85-225	ENST00000584155	PXDNL	A1KZ92	1463 aa		4.84	□□□□□ -1.63
NUP85-225	ENST00000584155	WASHC2A	Q641Q2	1341 aa		4.84	□□□□□ -1.63
NUP85-225	ENST00000584155	PCDH11X	Q9BZA7	1347 aa		4.84	□□□□□ -1.63
NUP85-225	ENST00000584155	PCDH11Y	Q9BZA8	1340 aa		4.84	□□□□□ -1.63
NUP85-225	ENST00000584155	CDC14C	A4D256	554 aa		4.84	□□□□□ -1.63
NUP85-225	ENST00000584155	FIGNL2	A6NMB9	653 aa		4.84	□□□□□ -1.63
NUP85-225	ENST00000584155	RPS6KA4	O75676	772 aa		4.84	□□□□□ -1.63
NUP85-225	ENST00000584155	FURIN	P09958	794 aa		4.84	□□□□□ -1.63
NUP85-225	ENST00000584155	TGFB2	P61812	414 aa		4.84	□□□□□ -1.63
NUP85-225	ENST00000584155	SLC39A6	Q13433	755 aa		4.84	□□□□□ -1.63
NUP85-225	ENST00000584155	C4orf48	Q5BLP8	95 aa		4.84	□□□□□ -1.63
NUP85-225	ENST00000584155	SH3RF1	Q7Z6J0	888 aa		4.84	□□□□□ -1.63
NUP85-225	ENST00000584155	IFNL2	Q8IZJ0	200 aa		4.84	□□□□□ -1.63
NUP85-225	ENST00000584155	BEND7	Q8N7W2	519 aa	Predicted RBP	4.84	□□□□□ -1.63
NUP85-225	ENST00000584155	ENAM	Q9NRM1	1142 aa		4.84	□□□□□ -1.63
NUP85-225	ENST00000584155	TMOD3	Q9NYL9	352 aa		4.84	□□□□□ -1.63
NUP85-225	ENST00000584155	MAP2	P11137	1827 aa	Known RBP	4.83	□□□□□ -1.64
NUP85-225	ENST00000584155	TAF1L	Q8IZX4	1826 aa		4.83	□□□□□ -1.64
NUP85-225	ENST00000584155	C4B	P0C0L5	1744 aa		4.83	□□□□□ -1.64
NUP85-225	ENST00000584155	NSD3	Q9BZ95	1437 aa		4.83	□□□□□ -1.64
NUP85-225	ENST00000584155	CGNL1	Q0VF96	1302 aa		4.83	□□□□□ -1.64
NUP85-225	ENST00000584155	KRBA1	A5PL33	1030 aa		4.83	□□□□□ -1.64
NUP85-225	ENST00000584155	SPINT1	O43278	529 aa		4.83	□□□□□ -1.64
NUP85-225	ENST00000584155	RFC4	P35249	363 aa		4.83	□□□□□ -1.64
NUP85-225	ENST00000584155	CRKL	P46109	303 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms