RNA–Protein interactions for RNA: ENST00000582665.5

NDEL1-214, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-214ENST00000582665 ZC3H12CQ9C0D7 883 aaKnown RBP12.39□□□□□ -0.43
NDEL1-214ENST00000582665 RWDD1Q9H446 243 aaPredicted RBP12.39□□□□□ -0.43
NDEL1-214ENST00000582665 AKAP2Q9Y2D5 859 aa12.39□□□□□ -0.43
NDEL1-214ENST00000582665 DICER1Q9UPY3 1922 aaKnown RBP12.39□□□□□ -0.43
NDEL1-214ENST00000582665 ZC3H4Q9UPT8 1303 aaKnown RBP12.38□□□□□ -0.43
NDEL1-214ENST00000582665 PPIP5K2O43314 1243 aa12.38□□□□□ -0.43
NDEL1-214ENST00000582665 KCNJ4P48050 445 aa12.38□□□□□ -0.43
NDEL1-214ENST00000582665 OS9Q13438 667 aaPredicted RBP12.38□□□□□ -0.43
NDEL1-214ENST00000582665 TNNI3KQ59H18 835 aa12.38□□□□□ -0.43
NDEL1-214ENST00000582665 C9orf131Q5VYM1 1079 aa12.38□□□□□ -0.43
NDEL1-214ENST00000582665 GCC1Q96CN9 775 aa12.38□□□□□ -0.43
NDEL1-214ENST00000582665 FAM84BQ96KN1 310 aaPredicted RBP12.38□□□□□ -0.43
NDEL1-214ENST00000582665 FPGT-TNNI3KV9GXZ4 949 aa12.38□□□□□ -0.43
NDEL1-214ENST00000582665 ARAP2Q8WZ64 1704 aa12.37□□□□□ -0.43
NDEL1-214ENST00000582665 A0A1B0GUL7 405 aa12.37□□□□□ -0.43
NDEL1-214ENST00000582665 FZD9O00144 591 aa12.37□□□□□ -0.43
NDEL1-214ENST00000582665 IFIT1P09914 478 aaKnown RBP12.37□□□□□ -0.43
NDEL1-214ENST00000582665 SLC5A1P13866 664 aa12.37□□□□□ -0.43
NDEL1-214ENST00000582665 TIMM10P62072 90 aa12.37□□□□□ -0.43
NDEL1-214ENST00000582665 LARGE2Q8N3Y3 721 aa12.37□□□□□ -0.43
NDEL1-214ENST00000582665 EAF2Q96CJ1 260 aaPredicted RBP12.37□□□□□ -0.43
NDEL1-214ENST00000582665 COA1Q9GZY4 146 aa12.37□□□□□ -0.43
NDEL1-214ENST00000582665 CCDC88AQ3V6T2 1871 aa12.36□□□□□ -0.43
NDEL1-214ENST00000582665 YDJCA8MPS7 323 aa12.36□□□□□ -0.43
NDEL1-214ENST00000582665 RIMBP2O15034 1052 aa12.36□□□□□ -0.43
NDEL1-214ENST00000582665 IL1R1P14778 569 aa12.36□□□□□ -0.43
NDEL1-214ENST00000582665 PODNQ7Z5L7 613 aa12.36□□□□□ -0.43
NDEL1-214ENST00000582665 TDRD7Q8NHU6 1098 aaKnown RBP12.36□□□□□ -0.43
NDEL1-214ENST00000582665 LRRCC1Q9C099 1032 aa12.36□□□□□ -0.43
NDEL1-214ENST00000582665 CD209Q9NNX6 404 aa12.36□□□□□ -0.43
NDEL1-214ENST00000582665 RNF181Q9P0P0 153 aa12.36□□□□□ -0.43
NDEL1-214ENST00000582665 ZNRF3Q9ULT6 936 aa12.36□□□□□ -0.43
NDEL1-214ENST00000582665 ADORA1P30542 326 aa12.35□□□□□ -0.43
NDEL1-214ENST00000582665 HIBADHP31937 336 aaKnown RBP12.35□□□□□ -0.43
NDEL1-214ENST00000582665 GYG1P46976 350 aa12.35□□□□□ -0.43
NDEL1-214ENST00000582665 BCAMP50895 628 aa12.35□□□□□ -0.43
NDEL1-214ENST00000582665 NIM1KQ8IY84 436 aa12.35□□□□□ -0.43
NDEL1-214ENST00000582665 CLASRPQ8N2M8 674 aaKnown RBP12.35□□□□□ -0.43
NDEL1-214ENST00000582665 JDP2Q8WYK2 163 aa12.35□□□□□ -0.43
NDEL1-214ENST00000582665 XAGE2Q96GT9 111 aa12.35□□□□□ -0.43
NDEL1-214ENST00000582665 IL1RAPL2Q9NP60 686 aa12.35□□□□□ -0.43
NDEL1-214ENST00000582665 DBNLQ9UJU6 430 aaKnown RBP12.35□□□□□ -0.43
NDEL1-214ENST00000582665 KDM2BQ8NHM5 1336 aa12.35□□□□□ -0.43
NDEL1-214ENST00000582665 ECE2O60344 883 aa12.34□□□□□ -0.43
NDEL1-214ENST00000582665 DOK7Q18PE1 504 aa12.34□□□□□ -0.43
NDEL1-214ENST00000582665 CAVIN4Q5BKX8 364 aa12.34□□□□□ -0.43
NDEL1-214ENST00000582665 ZNF804AQ7Z570 1209 aa12.34□□□□□ -0.43
NDEL1-214ENST00000582665 ZNF512BQ96KM6 892 aaPredicted RBP12.34□□□□□ -0.43
NDEL1-214ENST00000582665 DBNDD2Q9BQY9 259 aa12.34□□□□□ -0.43
NDEL1-214ENST00000582665 DBNDD1Q9H9R9 158 aa12.34□□□□□ -0.43
NDEL1-214ENST00000582665 CHD4Q14839 1912 aa12.34□□□□□ -0.43
NDEL1-214ENST00000582665 SCN9AQ15858 1988 aa12.34□□□□□ -0.43
NDEL1-214ENST00000582665 FAM205AQ6ZU69 1335 aa12.34□□□□□ -0.43
NDEL1-214ENST00000582665 TIAM2Q8IVF5 1701 aa12.34□□□□□ -0.43
NDEL1-214ENST00000582665 ZNF646O15015 1829 aaPredicted RBP12.33□□□□□ -0.44
NDEL1-214ENST00000582665 APBB1O00213 710 aa12.33□□□□□ -0.44
NDEL1-214ENST00000582665 SMARCA5O60264 1052 aaPredicted RBP12.33□□□□□ -0.44
NDEL1-214ENST00000582665 PHKA1P46020 1223 aa12.33□□□□□ -0.44
NDEL1-214ENST00000582665 NUCB1Q02818 461 aa12.33□□□□□ -0.44
NDEL1-214ENST00000582665 CXCL9Q07325 125 aa12.33□□□□□ -0.44
NDEL1-214ENST00000582665 CCDC102BQ68D86 513 aa12.33□□□□□ -0.44
NDEL1-214ENST00000582665 NEUROD6Q96NK8 337 aa12.33□□□□□ -0.44
NDEL1-214ENST00000582665 CCDC8Q9H0W5 538 aaPredicted RBP12.33□□□□□ -0.44
NDEL1-214ENST00000582665 KCNQ5Q9NR82 932 aa12.33□□□□□ -0.44
NDEL1-214ENST00000582665 TLR7Q9NYK1 1049 aaKnown RBP12.33□□□□□ -0.44
NDEL1-214ENST00000582665 PDS5AQ29RF7 1337 aaKnown RBP12.33□□□□□ -0.44
NDEL1-214ENST00000582665 SALL3Q9BXA9 1300 aa12.33□□□□□ -0.44
NDEL1-214ENST00000582665 PSME4Q14997 1843 aa12.32□□□□□ -0.44
NDEL1-214ENST00000582665 SEMA3EO15041 775 aa12.32□□□□□ -0.44
NDEL1-214ENST00000582665 ARID4AP29374 1257 aaPredicted RBP12.32□□□□□ -0.44
NDEL1-214ENST00000582665 AACSQ86V21 672 aa12.32□□□□□ -0.44
NDEL1-214ENST00000582665 ZNF541Q9H0D2 1346 aa12.32□□□□□ -0.44
NDEL1-214ENST00000582665 VIL1P09327 827 aaKnown RBP12.31□□□□□ -0.44
NDEL1-214ENST00000582665 DACT2Q5SW24 774 aa12.31□□□□□ -0.44
NDEL1-214ENST00000582665 ANKRD45Q5TZF3 282 aa12.31□□□□□ -0.44
NDEL1-214ENST00000582665 STRIP1Q5VSL9 837 aa12.31□□□□□ -0.44
NDEL1-214ENST00000582665 PPP4R2Q9NY27 417 aa12.31□□□□□ -0.44
NDEL1-214ENST00000582665 COL1A1P02452 1464 aaPredicted RBP12.31□□□□□ -0.44
NDEL1-214ENST00000582665 USP17L3A6NCW0 530 aa12.3□□□□□ -0.44
NDEL1-214ENST00000582665 USP17L4A6NCW7 530 aa12.3□□□□□ -0.44
NDEL1-214ENST00000582665 GLTPD2A6NH11 291 aa12.3□□□□□ -0.44
NDEL1-214ENST00000582665 G3V3G9 751 aa12.3□□□□□ -0.44
NDEL1-214ENST00000582665 PSMD14O00487 310 aa12.3□□□□□ -0.44
NDEL1-214ENST00000582665 RAD17O75943 681 aa12.3□□□□□ -0.44
NDEL1-214ENST00000582665 IFIT2P09913 472 aaKnown RBP12.3□□□□□ -0.44
NDEL1-214ENST00000582665 EIF6P56537 245 aaKnown RBP12.3□□□□□ -0.44
NDEL1-214ENST00000582665 FKBP1AP62942 108 aaKnown RBP12.3□□□□□ -0.44
NDEL1-214ENST00000582665 RASGRF1Q13972 1273 aa12.3□□□□□ -0.44
NDEL1-214ENST00000582665 TNIP1Q15025 636 aa12.3□□□□□ -0.44
NDEL1-214ENST00000582665 DCAF8Q5TAQ9 597 aa12.3□□□□□ -0.44
NDEL1-214ENST00000582665 CIAPIN1Q6FI81 312 aa12.3□□□□□ -0.44
NDEL1-214ENST00000582665 CENPQQ7L2Z9 268 aaPredicted RBP12.3□□□□□ -0.44
NDEL1-214ENST00000582665 USP17L1Q7RTZ2 530 aa12.3□□□□□ -0.44
NDEL1-214ENST00000582665 CHD1LQ86WJ1 897 aa12.3□□□□□ -0.44
NDEL1-214ENST00000582665 VPS37DQ86XT2 251 aa12.3□□□□□ -0.44
NDEL1-214ENST00000582665 GPC2Q8N158 579 aa12.3□□□□□ -0.44
NDEL1-214ENST00000582665 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.3□□□□□ -0.44
NDEL1-214ENST00000582665 GMLQ99445 158 aa12.3□□□□□ -0.44
NDEL1-214ENST00000582665 GNL3LQ9NVN8 582 aaKnown RBP12.3□□□□□ -0.44
NDEL1-214ENST00000582665 UQCRFS1P1P0C7P4 283 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms