RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 ANGEL2Q5VTE6 544 aaKnown RBP10.01□□□□□ -0.81
CCDC47-205ENST00000582331 CELF1Q92879 486 aaKnown RBP10.01□□□□□ -0.81
CCDC47-205ENST00000582331 TSPYL4Q9UJ04 414 aa10.01□□□□□ -0.81
CCDC47-205ENST00000582331 TAF1P21675 1872 aa10□□□□□ -0.81
CCDC47-205ENST00000582331 UBE2Q2LH0YL09 131 aa10□□□□□ -0.81
CCDC47-205ENST00000582331 TM4SF4P48230 202 aa10□□□□□ -0.81
CCDC47-205ENST00000582331 ZNF280AP59817 542 aaPredicted RBP10□□□□□ -0.81
CCDC47-205ENST00000582331 SF3B3Q15393 1217 aaKnown RBP10□□□□□ -0.81
CCDC47-205ENST00000582331 NFE2L2Q16236 605 aa10□□□□□ -0.81
CCDC47-205ENST00000582331 TBC1D16Q8TBP0 767 aa10□□□□□ -0.81
CCDC47-205ENST00000582331 XAGE3Q8WTP9 111 aa10□□□□□ -0.81
CCDC47-205ENST00000582331 LRRC37AA6NMS7 1700 aa9.99□□□□□ -0.81
CCDC47-205ENST00000582331 FKTNO75072 461 aa9.99□□□□□ -0.81
CCDC47-205ENST00000582331 PSEN1P49768 467 aa9.99□□□□□ -0.81
CCDC47-205ENST00000582331 IRX5P78411 483 aaPredicted RBP9.99□□□□□ -0.81
CCDC47-205ENST00000582331 PDAP1Q13442 181 aaKnown RBP9.99□□□□□ -0.81
CCDC47-205ENST00000582331 RSBN1LQ6PCB5 846 aaPredicted RBP9.99□□□□□ -0.81
CCDC47-205ENST00000582331 MOB2Q70IA6 237 aa9.99□□□□□ -0.81
CCDC47-205ENST00000582331 AGBL3Q8NEM8 1001 aa9.99□□□□□ -0.81
CCDC47-205ENST00000582331 NECTIN2Q92692 538 aa9.99□□□□□ -0.81
CCDC47-205ENST00000582331 ZNF428Q96B54 188 aa9.99□□□□□ -0.81
CCDC47-205ENST00000582331 PAPPA2Q9BXP8 1791 aa9.98□□□□□ -0.81
CCDC47-205ENST00000582331 DLG5Q8TDM6 1919 aa9.98□□□□□ -0.81
CCDC47-205ENST00000582331 RPS8P62241 208 aaKnown RBP9.98□□□□□ -0.81
CCDC47-205ENST00000582331 GOLGA2Q08379 1002 aa9.98□□□□□ -0.81
CCDC47-205ENST00000582331 SREBF2Q12772 1141 aa9.98□□□□□ -0.81
CCDC47-205ENST00000582331 TTLL12Q14166 644 aaPredicted RBP9.98□□□□□ -0.81
CCDC47-205ENST00000582331 CCER1Q8TC90 406 aaPredicted RBP9.98□□□□□ -0.81
CCDC47-205ENST00000582331 FAM89AQ96GI7 184 aa9.98□□□□□ -0.81
CCDC47-205ENST00000582331 PLEKHF1Q96S99 279 aa9.98□□□□□ -0.81
CCDC47-205ENST00000582331 PNNQ9H307 717 aaKnown RBP9.98□□□□□ -0.81
CCDC47-205ENST00000582331 OCEL1Q9H607 264 aa9.98□□□□□ -0.81
CCDC47-205ENST00000582331 MYOZ2Q9NPC6 264 aa9.98□□□□□ -0.81
CCDC47-205ENST00000582331 PITPNM2Q9BZ72 1349 aa9.98□□□□□ -0.81
CCDC47-205ENST00000582331 DDX60Q8IY21 1712 aaKnown RBP9.97□□□□□ -0.81
CCDC47-205ENST00000582331 USP17L8P0C7I0 530 aa9.97□□□□□ -0.81
CCDC47-205ENST00000582331 MKRN3Q13064 507 aaKnown RBP9.97□□□□□ -0.81
CCDC47-205ENST00000582331 PRAMEF18Q5VWM3 479 aa9.97□□□□□ -0.81
CCDC47-205ENST00000582331 INTS3Q68E01 1043 aaKnown RBP9.97□□□□□ -0.81
CCDC47-205ENST00000582331 CFHR5Q9BXR6 569 aa9.97□□□□□ -0.81
CCDC47-205ENST00000582331 BABAM1Q9NWV8 329 aa9.97□□□□□ -0.81
CCDC47-205ENST00000582331 PODXL2Q9NZ53 605 aa9.97□□□□□ -0.81
CCDC47-205ENST00000582331 UFL1O94874 794 aa9.96□□□□□ -0.82
CCDC47-205ENST00000582331 NF2P35240 595 aa9.96□□□□□ -0.82
CCDC47-205ENST00000582331 PLBD2Q8NHP8 589 aa9.96□□□□□ -0.82
CCDC47-205ENST00000582331 GMLQ99445 158 aa9.96□□□□□ -0.82
CCDC47-205ENST00000582331 ISCA1Q9BUE6 129 aa9.96□□□□□ -0.82
CCDC47-205ENST00000582331 ANKIB1Q9P2G1 1089 aa9.96□□□□□ -0.82
CCDC47-205ENST00000582331 GGA1Q9UJY5 639 aa9.96□□□□□ -0.82
CCDC47-205ENST00000582331 SCAF8Q9UPN6 1271 aaKnown RBP9.96□□□□□ -0.82
CCDC47-205ENST00000582331 MAPK8IP3Q9UPT6 1336 aa9.96□□□□□ -0.82
CCDC47-205ENST00000582331 ZNF609O15014 1411 aa9.96□□□□□ -0.82
CCDC47-205ENST00000582331 USP17L3A6NCW0 530 aa9.95□□□□□ -0.82
CCDC47-205ENST00000582331 USP17L4A6NCW7 530 aa9.95□□□□□ -0.82
CCDC47-205ENST00000582331 ATP5J2-PTCD1G3V325 749 aa9.95□□□□□ -0.82
CCDC47-205ENST00000582331 IRS4O14654 1257 aaPredicted RBP9.95□□□□□ -0.82
CCDC47-205ENST00000582331 ALDH1A1P00352 501 aa9.95□□□□□ -0.82
CCDC47-205ENST00000582331 RTL5Q5HYW3 569 aaPredicted RBP9.95□□□□□ -0.82
CCDC47-205ENST00000582331 ANKRD13DQ6ZTN6 518 aa9.95□□□□□ -0.82
CCDC47-205ENST00000582331 USP17L1Q7RTZ2 530 aa9.95□□□□□ -0.82
CCDC47-205ENST00000582331 R3HDMLQ9H3Y0 253 aa9.95□□□□□ -0.82
CCDC47-205ENST00000582331 TRIM17Q9Y577 477 aa9.95□□□□□ -0.82
CCDC47-205ENST00000582331 SCN9AQ15858 1988 aa9.95□□□□□ -0.82
CCDC47-205ENST00000582331 RIPK4P57078 832 aa9.94□□□□□ -0.82
CCDC47-205ENST00000582331 PTPN12Q05209 780 aaKnown RBP9.94□□□□□ -0.82
CCDC47-205ENST00000582331 NBPF9Q3BBW0 867 aa9.94□□□□□ -0.82
CCDC47-205ENST00000582331 ARMC9Q7Z3E5 817 aa9.94□□□□□ -0.82
CCDC47-205ENST00000582331 PODNQ7Z5L7 613 aa9.94□□□□□ -0.82
CCDC47-205ENST00000582331 MKI67P46013 3256 aaKnown RBP9.93□□□□□ -0.82
CCDC47-205ENST00000582331 HSP90B1P14625 803 aaKnown RBP9.93□□□□□ -0.82
CCDC47-205ENST00000582331 FXR1P51114 621 aaKnown RBP eCLIP9.93□□□□□ -0.82
CCDC47-205ENST00000582331 INHBEP58166 350 aa9.93□□□□□ -0.82
CCDC47-205ENST00000582331 TRIM28Q13263 835 aaKnown RBP9.93□□□□□ -0.82
CCDC47-205ENST00000582331 OGFOD1Q8N543 542 aa9.93□□□□□ -0.82
CCDC47-205ENST00000582331 SEC31BQ9NQW1 1179 aa9.93□□□□□ -0.82
CCDC47-205ENST00000582331 CHPF2Q9P2E5 772 aa9.93□□□□□ -0.82
CCDC47-205ENST00000582331 COL4A1P02462 1669 aa9.93□□□□□ -0.82
CCDC47-205ENST00000582331 ATP2B4P23634 1241 aa9.92□□□□□ -0.82
CCDC47-205ENST00000582331 PRKG1Q13976 671 aa9.92□□□□□ -0.82
CCDC47-205ENST00000582331 SPRYD7Q5W111 196 aa9.92□□□□□ -0.82
CCDC47-205ENST00000582331 OTOP1Q7RTM1 612 aa9.92□□□□□ -0.82
CCDC47-205ENST00000582331 XDHP47989 1333 aa9.91□□□□□ -0.82
CCDC47-205ENST00000582331 MANSC4A6NHS7 340 aaPredicted RBP9.91□□□□□ -0.82
CCDC47-205ENST00000582331 WNT10BO00744 389 aa9.91□□□□□ -0.82
CCDC47-205ENST00000582331 EN2P19622 333 aaPredicted RBP9.91□□□□□ -0.82
CCDC47-205ENST00000582331 LMOD3Q0VAK6 560 aa9.91□□□□□ -0.82
CCDC47-205ENST00000582331 KRT24Q2M2I5 525 aa9.91□□□□□ -0.82
CCDC47-205ENST00000582331 CCDC152Q4G0S7 254 aa9.91□□□□□ -0.82
CCDC47-205ENST00000582331 LDLRAD1Q5T700 205 aa9.91□□□□□ -0.82
CCDC47-205ENST00000582331 HDGFL1Q5TGJ6 251 aa9.91□□□□□ -0.82
CCDC47-205ENST00000582331 ZBTB38Q8NAP3 1195 aaPredicted RBP9.91□□□□□ -0.82
CCDC47-205ENST00000582331 SLC10A4Q96EP9 437 aa9.91□□□□□ -0.82
CCDC47-205ENST00000582331 ERO1AQ96HE7 468 aa9.91□□□□□ -0.82
CCDC47-205ENST00000582331 DBF4Q9UBU7 674 aaPredicted RBP9.91□□□□□ -0.82
CCDC47-205ENST00000582331 ANGEL1Q9UNK9 670 aaKnown RBP9.91□□□□□ -0.82
CCDC47-205ENST00000582331 PTPN22Q9Y2R2 807 aa9.91□□□□□ -0.82
CCDC47-205ENST00000582331 MMP14P50281 582 aa9.9□□□□□ -0.82
CCDC47-205ENST00000582331 DACT2Q5SW24 774 aa9.9□□□□□ -0.82
CCDC47-205ENST00000582331 APOBEC3FQ8IUX4 373 aaKnown RBP9.9□□□□□ -0.82
CCDC47-205ENST00000582331 ANKRD18AQ8IVF6 992 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms