RNA–Protein interactions for RNA: ENST00000576616.5

SLC12A4-219, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-219ENST00000576616 HMGB1P09429 215 aaKnown RBP13.24□□□□□ -0.29
SLC12A4-219ENST00000576616 SCARF1Q14162 830 aa13.24□□□□□ -0.29
SLC12A4-219ENST00000576616 SF3A1Q15459 793 aaKnown RBP13.24□□□□□ -0.29
SLC12A4-219ENST00000576616 BICDL1Q6ZP65 573 aa13.24□□□□□ -0.29
SLC12A4-219ENST00000576616 SPC24Q8NBT2 197 aa13.24□□□□□ -0.29
SLC12A4-219ENST00000576616 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.24□□□□□ -0.297e-7■■■■□ 25.4
SLC12A4-219ENST00000576616 DACT1Q9NYF0 836 aa13.24□□□□□ -0.29
SLC12A4-219ENST00000576616 MAST3O60307 1309 aa13.23□□□□□ -0.29
SLC12A4-219ENST00000576616 M0R2C6 588 aa13.23□□□□□ -0.29
SLC12A4-219ENST00000576616 SNAP23O00161 211 aa13.23□□□□□ -0.29
SLC12A4-219ENST00000576616 PCCAP05165 728 aaPredicted RBP13.23□□□□□ -0.29
SLC12A4-219ENST00000576616 ATP6V1AP38606 617 aa13.23□□□□□ -0.29
SLC12A4-219ENST00000576616 GIGYF2Q6Y7W6 1299 aaKnown RBP13.23□□□□□ -0.29
SLC12A4-219ENST00000576616 SCAND2PQ9GZW5 306 aaPredicted RBP13.23□□□□□ -0.29
SLC12A4-219ENST00000576616 CTNNA3Q9UI47 895 aa13.23□□□□□ -0.29
SLC12A4-219ENST00000576616 GNL2Q13823 731 aaKnown RBP13.23□□□□□ -0.29
SLC12A4-219ENST00000576616 STOX1Q6ZVD7 989 aa13.23□□□□□ -0.29
SLC12A4-219ENST00000576616 GTF3C6Q969F1 213 aa13.23□□□□□ -0.29
SLC12A4-219ENST00000576616 ISCA1Q9BUE6 129 aa13.23□□□□□ -0.29
SLC12A4-219ENST00000576616 GPHNQ9NQX3 736 aaPredicted RBP13.23□□□□□ -0.29
SLC12A4-219ENST00000576616 CCDC39Q9UFE4 941 aa13.23□□□□□ -0.29
SLC12A4-219ENST00000576616 IQSEC3Q9UPP2 1182 aaPredicted RBP13.23□□□□□ -0.29
SLC12A4-219ENST00000576616 MAP3K15Q6ZN16 1313 aa13.23□□□□□ -0.29
SLC12A4-219ENST00000576616 ZNF213O14771 459 aa13.23□□□□□ -0.29
SLC12A4-219ENST00000576616 NKX1-1Q15270 411 aaPredicted RBP13.23□□□□□ -0.29
SLC12A4-219ENST00000576616 ZMYM1Q5SVZ6 1142 aa13.23□□□□□ -0.29
SLC12A4-219ENST00000576616 CCDC192P0DO97 292 aa13.22□□□□□ -0.29
SLC12A4-219ENST00000576616 KIAA2012Q0VF49 1180 aa13.22□□□□□ -0.29
SLC12A4-219ENST00000576616 SCRN1Q12765 414 aa13.22□□□□□ -0.29
SLC12A4-219ENST00000576616 ZHX1Q9UKY1 873 aaPredicted RBP13.22□□□□□ -0.29
SLC12A4-219ENST00000576616 PTPDC1A2A3K4 754 aa13.22□□□□□ -0.29
SLC12A4-219ENST00000576616 LIG1P18858 919 aa13.22□□□□□ -0.29
SLC12A4-219ENST00000576616 DDB1Q16531 1140 aa13.22□□□□□ -0.29
SLC12A4-219ENST00000576616 RRP12Q5JTH9 1297 aaKnown RBP13.22□□□□□ -0.29
SLC12A4-219ENST00000576616 NLRP10Q86W26 655 aa13.22□□□□□ -0.29
SLC12A4-219ENST00000576616 KCNB2Q92953 911 aa13.22□□□□□ -0.29
SLC12A4-219ENST00000576616 IL17RAQ96F46 866 aa13.22□□□□□ -0.29
SLC12A4-219ENST00000576616 R3HCC1Q9Y3T6 440 aaKnown RBP13.22□□□□□ -0.29
SLC12A4-219ENST00000576616 ADCY5O95622 1261 aa13.22□□□□□ -0.29
SLC12A4-219ENST00000576616 OTUD7BQ6GQQ9 843 aa13.22□□□□□ -0.29
SLC12A4-219ENST00000576616 NFXL1Q6ZNB6 911 aa13.22□□□□□ -0.29
SLC12A4-219ENST00000576616 USP54Q70EL1 1684 aa13.21□□□□□ -0.29
SLC12A4-219ENST00000576616 COL5A2P05997 1499 aaPredicted RBP13.21□□□□□ -0.29
SLC12A4-219ENST00000576616 MAP3K11Q16584 847 aa13.21□□□□□ -0.29
SLC12A4-219ENST00000576616 HOMEZQ8IX15 550 aa13.21□□□□□ -0.29
SLC12A4-219ENST00000576616 CCDC144CPQ8IYA2 1237 aa13.21□□□□□ -0.29
SLC12A4-219ENST00000576616 TRPM3Q9HCF6 1732 aaPredicted RBP13.21□□□□□ -0.29
SLC12A4-219ENST00000576616 ME1P48163 572 aa13.21□□□□□ -0.29
SLC12A4-219ENST00000576616 ZRSR1Q15695 479 aaKnown RBP13.21□□□□□ -0.29
SLC12A4-219ENST00000576616 SASS6Q6UVJ0 657 aa13.21□□□□□ -0.29
SLC12A4-219ENST00000576616 GPR108Q9NPR9 543 aa13.21□□□□□ -0.29
SLC12A4-219ENST00000576616 COL15A1P39059 1388 aa13.21□□□□□ -0.3
SLC12A4-219ENST00000576616 POLR3DP05423 398 aaPredicted RBP13.21□□□□□ -0.3
SLC12A4-219ENST00000576616 TTLL11Q8NHH1 800 aa13.21□□□□□ -0.3
SLC12A4-219ENST00000576616 AIDAQ96BJ3 306 aa13.21□□□□□ -0.3
SLC12A4-219ENST00000576616 DSCC1Q9BVC3 393 aa13.21□□□□□ -0.3
SLC12A4-219ENST00000576616 PUS7LQ9H0K6 701 aaKnown RBP13.21□□□□□ -0.3
SLC12A4-219ENST00000576616 KLF18A0A0U1RQI7 1052 aa13.2□□□□□ -0.3
SLC12A4-219ENST00000576616 GOLGA8BA8MQT2 603 aa13.2□□□□□ -0.3
SLC12A4-219ENST00000576616 GPAA1O43292 621 aa13.2□□□□□ -0.3
SLC12A4-219ENST00000576616 CIAO1O76071 339 aa13.2□□□□□ -0.3
SLC12A4-219ENST00000576616 FGAP02671 866 aa13.2□□□□□ -0.3
SLC12A4-219ENST00000576616 RXRAP19793 462 aa13.2□□□□□ -0.3
SLC12A4-219ENST00000576616 CTSWP56202 376 aa13.2□□□□□ -0.3
SLC12A4-219ENST00000576616 PRC1O43663 620 aa13.2□□□□□ -0.3
SLC12A4-219ENST00000576616 KCNQ4P56696 695 aa13.2□□□□□ -0.3
SLC12A4-219ENST00000576616 CFAP45Q9UL16 551 aa13.2□□□□□ -0.3
SLC12A4-219ENST00000576616 TCHHQ07283 1943 aa13.2□□□□□ -0.3
SLC12A4-219ENST00000576616 USPL1Q5W0Q7 1092 aa13.2□□□□□ -0.3
SLC12A4-219ENST00000576616 LEO1Q8WVC0 666 aaPredicted RBP13.19□□□□□ -0.3
SLC12A4-219ENST00000576616 FTOQ9C0B1 505 aaKnown RBP eCLIP13.19□□□□□ -0.3
SLC12A4-219ENST00000576616 ABCF2Q9UG63 623 aa13.19□□□□□ -0.3
SLC12A4-219ENST00000576616 SH3TC1Q8TE82 1336 aa13.19□□□□□ -0.3
SLC12A4-219ENST00000576616 ZFYP08048 801 aaPredicted RBP13.19□□□□□ -0.3
SLC12A4-219ENST00000576616 NIP7Q9Y221 180 aaKnown RBP eCLIP13.19□□□□□ -0.3
SLC12A4-219ENST00000576616 CYP19A1P11511 503 aaPredicted RBP13.19□□□□□ -0.3
SLC12A4-219ENST00000576616 HSPA1LP34931 641 aa13.19□□□□□ -0.3
SLC12A4-219ENST00000576616 PHKA1P46020 1223 aa13.19□□□□□ -0.3
SLC12A4-219ENST00000576616 CCDC73Q6ZRK6 1079 aa13.19□□□□□ -0.3
SLC12A4-219ENST00000576616 MCM5P33992 734 aa13.18□□□□□ -0.3
SLC12A4-219ENST00000576616 ZSCAN25Q6NSZ9 544 aa13.18□□□□□ -0.3
SLC12A4-219ENST00000576616 APPBP2Q92624 585 aa13.18□□□□□ -0.3
SLC12A4-219ENST00000576616 PDE8AO60658 829 aa13.18□□□□□ -0.3
SLC12A4-219ENST00000576616 HMGN5P82970 282 aaKnown RBP13.18□□□□□ -0.3
SLC12A4-219ENST00000576616 TSGA10IPQ3SY00 556 aa13.18□□□□□ -0.3
SLC12A4-219ENST00000576616 CCDC82Q8N4S0 544 aa13.18□□□□□ -0.3
SLC12A4-219ENST00000576616 TMEM87AQ8NBN3 555 aa13.18□□□□□ -0.3
SLC12A4-219ENST00000576616 NCOA7Q8NI08 942 aa13.18□□□□□ -0.3
SLC12A4-219ENST00000576616 TTC12Q9H892 705 aaPredicted RBP13.18□□□□□ -0.3
SLC12A4-219ENST00000576616 VGLL3A8MV65 326 aa13.18□□□□□ -0.3
SLC12A4-219ENST00000576616 MCAMP43121 646 aa13.18□□□□□ -0.3
SLC12A4-219ENST00000576616 VPS37DQ86XT2 251 aa13.18□□□□□ -0.3
SLC12A4-219ENST00000576616 SEC31BQ9NQW1 1179 aa13.18□□□□□ -0.3
SLC12A4-219ENST00000576616 ORC3Q9UBD5 711 aaPredicted RBP13.18□□□□□ -0.3
SLC12A4-219ENST00000576616 SDF4Q9BRK5 362 aa13.17□□□□□ -0.3
SLC12A4-219ENST00000576616 LRP2BPQ9P2M1 347 aa13.17□□□□□ -0.3
SLC12A4-219ENST00000576616 IGHMBP2P38935 993 aaKnown RBP13.17□□□□□ -0.3
SLC12A4-219ENST00000576616 SYNE3Q6ZMZ3 975 aa13.17□□□□□ -0.3
SLC12A4-219ENST00000576616 MICU3Q86XE3 530 aa13.17□□□□□ -0.3
SLC12A4-219ENST00000576616 C8orf76Q96K31 380 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms