RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 PTPN12Q05209 780 aaKnown RBP15.81■□□□□ 0.12
PRPF8-208ENST00000573716 DUSP27Q5VZP5 1158 aa15.81■□□□□ 0.12
PRPF8-208ENST00000573716 ARMC9Q7Z3E5 817 aa15.81■□□□□ 0.12
PRPF8-208ENST00000573716 PODNQ7Z5L7 613 aa15.81■□□□□ 0.12
PRPF8-208ENST00000573716 WTIPA6NIX2 430 aaPredicted RBP15.8■□□□□ 0.12
PRPF8-208ENST00000573716 PDE8AO60658 829 aa15.8■□□□□ 0.12
PRPF8-208ENST00000573716 HOXB7P09629 217 aa15.8■□□□□ 0.12
PRPF8-208ENST00000573716 NOM1Q5C9Z4 860 aaKnown RBP15.8■□□□□ 0.12
PRPF8-208ENST00000573716 HABP4Q5JVS0 413 aaKnown RBP15.8■□□□□ 0.12
PRPF8-208ENST00000573716 TRIM17Q9Y577 477 aa15.8■□□□□ 0.12
PRPF8-208ENST00000573716 WNT10BO00744 389 aa15.79■□□□□ 0.12
PRPF8-208ENST00000573716 PHAXQ9H814 394 aaKnown RBP15.79■□□□□ 0.12
PRPF8-208ENST00000573716 ANGEL1Q9UNK9 670 aaKnown RBP15.79■□□□□ 0.12
PRPF8-208ENST00000573716 PCCAP05165 728 aaPredicted RBP15.78■□□□□ 0.12
PRPF8-208ENST00000573716 DACT2Q5SW24 774 aa15.78■□□□□ 0.12
PRPF8-208ENST00000573716 CWC25Q9NXE8 425 aaPredicted RBP15.78■□□□□ 0.12
PRPF8-208ENST00000573716 FZD1Q9UP38 647 aa15.78■□□□□ 0.12
PRPF8-208ENST00000573716 TRIM35Q9UPQ4 493 aa15.78■□□□□ 0.12
PRPF8-208ENST00000573716 POTEFA5A3E0 1075 aa15.77■□□□□ 0.12
PRPF8-208ENST00000573716 SPRYD7Q5W111 196 aa15.77■□□□□ 0.12
PRPF8-208ENST00000573716 APOBEC3FQ8IUX4 373 aaKnown RBP15.77■□□□□ 0.12
PRPF8-208ENST00000573716 CCDC191Q8NCU4 936 aa15.77■□□□□ 0.12
PRPF8-208ENST00000573716 CDC5LQ99459 802 aaKnown RBP15.77■□□□□ 0.12
PRPF8-208ENST00000573716 MED23Q9ULK4 1368 aa15.76■□□□□ 0.11
PRPF8-208ENST00000573716 MYO3BQ8WXR4 1341 aa15.76■□□□□ 0.11
PRPF8-208ENST00000573716 ZNF646O15015 1829 aaPredicted RBP15.76■□□□□ 0.11
PRPF8-208ENST00000573716 ELL2O00472 640 aaPredicted RBP15.76■□□□□ 0.11
PRPF8-208ENST00000573716 ALDH1A1P00352 501 aa15.76■□□□□ 0.11
PRPF8-208ENST00000573716 OTOP1Q7RTM1 612 aa15.76■□□□□ 0.11
PRPF8-208ENST00000573716 KIAA0825Q8IV33 1275 aa15.76■□□□□ 0.11
PRPF8-208ENST00000573716 SLC10A4Q96EP9 437 aa15.76■□□□□ 0.11
PRPF8-208ENST00000573716 CCT4P50991 539 aaKnown RBP15.75■□□□□ 0.11
PRPF8-208ENST00000573716 STRIP1Q5VSL9 837 aa15.75■□□□□ 0.11
PRPF8-208ENST00000573716 RUNDC1Q96C34 613 aa15.75■□□□□ 0.11
PRPF8-208ENST00000573716 CFHR5Q9BXR6 569 aa15.75■□□□□ 0.11
PRPF8-208ENST00000573716 MBIPQ9NS73 344 aa15.75■□□□□ 0.11
PRPF8-208ENST00000573716 MINPP1Q9UNW1 487 aa15.75■□□□□ 0.11
PRPF8-208ENST00000573716 MYH3P11055 1940 aa15.74■□□□□ 0.11
PRPF8-208ENST00000573716 MANSC4A6NHS7 340 aaPredicted RBP15.74■□□□□ 0.11
PRPF8-208ENST00000573716 CTSWP56202 376 aa15.74■□□□□ 0.11
PRPF8-208ENST00000573716 WDR43Q15061 677 aaKnown RBP eCLIP15.74■□□□□ 0.11
PRPF8-208ENST00000573716 LDLRAD1Q5T700 205 aa15.74■□□□□ 0.11
PRPF8-208ENST00000573716 INTS3Q68E01 1043 aaKnown RBP15.74■□□□□ 0.11
PRPF8-208ENST00000573716 IFNL1Q8IU54 200 aa15.74■□□□□ 0.11
PRPF8-208ENST00000573716 TTLL5Q6EMB2 1281 aa15.73■□□□□ 0.11
PRPF8-208ENST00000573716 TXNRD3Q86VQ6 643 aa15.73■□□□□ 0.11
PRPF8-208ENST00000573716 CD99L2Q8TCZ2 262 aa15.73■□□□□ 0.11
PRPF8-208ENST00000573716 CLMNQ96JQ2 1002 aa15.73■□□□□ 0.11
PRPF8-208ENST00000573716 COA1Q9GZY4 146 aa15.73■□□□□ 0.11
PRPF8-208ENST00000573716 GREM2Q9H772 168 aa15.73■□□□□ 0.11
PRPF8-208ENST00000573716 KIAA0100Q14667 2235 aaKnown RBP15.73■□□□□ 0.11
PRPF8-208ENST00000573716 IGF2BP3O00425 579 aaKnown RBP eCLIP15.72■□□□□ 0.11
PRPF8-208ENST00000573716 DDX58O95786 925 aaKnown RBP15.72■□□□□ 0.11
PRPF8-208ENST00000573716 EN2P19622 333 aaPredicted RBP15.72■□□□□ 0.11
PRPF8-208ENST00000573716 INHBEP58166 350 aa15.72■□□□□ 0.11
PRPF8-208ENST00000573716 GTF2IP78347 998 aa15.72■□□□□ 0.11
PRPF8-208ENST00000573716 ERO1AQ96HE7 468 aa15.72■□□□□ 0.11
PRPF8-208ENST00000573716 WNK4Q96J92 1243 aa15.72■□□□□ 0.11
PRPF8-208ENST00000573716 METTL22Q9BUU2 404 aaPredicted RBP15.72■□□□□ 0.11
PRPF8-208ENST00000573716 BSDC1Q9NW68 430 aaPredicted RBP15.72■□□□□ 0.11
PRPF8-208ENST00000573716 RBBP6Q7Z6E9 1792 aaKnown RBP15.72■□□□□ 0.11
PRPF8-208ENST00000573716 RALBP1Q15311 655 aa15.71■□□□□ 0.11
PRPF8-208ENST00000573716 DLGAP5Q15398 846 aa15.71■□□□□ 0.11
PRPF8-208ENST00000573716 DEFB129Q9H1M3 183 aa15.71■□□□□ 0.11
PRPF8-208ENST00000573716 MAP3K2Q9Y2U5 619 aa15.71■□□□□ 0.11
PRPF8-208ENST00000573716 PPP1R12BO60237 982 aaPredicted RBP15.7■□□□□ 0.1
PRPF8-208ENST00000573716 KLRK1P26718 216 aa15.7■□□□□ 0.1
PRPF8-208ENST00000573716 IGHMBP2P38935 993 aaKnown RBP15.7■□□□□ 0.1
PRPF8-208ENST00000573716 KCNJ4P48050 445 aa15.7■□□□□ 0.1
PRPF8-208ENST00000573716 TTLL11Q8NHH1 800 aa15.7■□□□□ 0.1
PRPF8-208ENST00000573716 EFCC1Q9HA90 598 aa15.7■□□□□ 0.1
PRPF8-208ENST00000573716 PTPN22Q9Y2R2 807 aa15.7■□□□□ 0.1
PRPF8-208ENST00000573716 ZNF804BA4D1E1 1349 aa15.69■□□□□ 0.1
PRPF8-208ENST00000573716 F8W031 263 aaPredicted RBP15.69■□□□□ 0.1
PRPF8-208ENST00000573716 ZBTB48P10074 688 aaPredicted RBP15.69■□□□□ 0.1
PRPF8-208ENST00000573716 CRHR2Q13324 411 aa15.69■□□□□ 0.1
PRPF8-208ENST00000573716 OTUD7BQ6GQQ9 843 aa15.69■□□□□ 0.1
PRPF8-208ENST00000573716 TMEM106CQ9BVX2 250 aa15.69■□□□□ 0.1
PRPF8-208ENST00000573716 LEMD3Q9Y2U8 911 aa15.69■□□□□ 0.1
PRPF8-208ENST00000573716 COL1A1P02452 1464 aaPredicted RBP15.69■□□□□ 0.1
PRPF8-208ENST00000573716 ECM29Q5VYK3 1845 aa15.68■□□□□ 0.1
PRPF8-208ENST00000573716 CLRN2A0PK11 232 aa15.68■□□□□ 0.1
PRPF8-208ENST00000573716 MMP14P50281 582 aa15.68■□□□□ 0.1
PRPF8-208ENST00000573716 FXR1P51114 621 aaKnown RBP eCLIP15.68■□□□□ 0.18e-7■■■■□ 23.5
PRPF8-208ENST00000573716 VEZTQ9HBM0 779 aa15.68■□□□□ 0.1
PRPF8-208ENST00000573716 PCDHAC2Q9Y5I4 1007 aa15.68■□□□□ 0.1
PRPF8-208ENST00000573716 SSC5DA1L4H1 1573 aa15.67■□□□□ 0.1
PRPF8-208ENST00000573716 MYCP01106 439 aaPredicted RBP15.67■□□□□ 0.1
PRPF8-208ENST00000573716 IGKV5-2P06315 115 aa15.67■□□□□ 0.1
PRPF8-208ENST00000573716 NEXNQ0ZGT2 675 aa15.67■□□□□ 0.1
PRPF8-208ENST00000573716 CCDC30Q5VVM6 783 aa15.67■□□□□ 0.1
PRPF8-208ENST00000573716 UBE3BQ7Z3V4 1068 aa15.67■□□□□ 0.1
PRPF8-208ENST00000573716 ZBED3Q96IU2 234 aaPredicted RBP15.67■□□□□ 0.1
PRPF8-208ENST00000573716 MPHOSPH8Q99549 860 aa15.67■□□□□ 0.1
PRPF8-208ENST00000573716 ANKRD2Q9GZV1 360 aa15.67■□□□□ 0.1
PRPF8-208ENST00000573716 ADAMTS8Q9UP79 889 aa15.67■□□□□ 0.1
PRPF8-208ENST00000573716 PI4KAP2A4QPH2 592 aa15.66■□□□□ 0.1
PRPF8-208ENST00000573716 MYO1BO43795 1136 aa15.66■□□□□ 0.1
PRPF8-208ENST00000573716 IREB2P48200 963 aaKnown RBP15.66■□□□□ 0.1
PRPF8-208ENST00000573716 GNAI1P63096 354 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms