RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 GGA3Q9NZ52 723 aa17.69■□□□□ 0.42
GTF3C1-211ENST00000569653 ECE1P42892 770 aa17.68■□□□□ 0.42
GTF3C1-211ENST00000569653 DACT2Q5SW24 774 aa17.68■□□□□ 0.42
GTF3C1-211ENST00000569653 AGBL3Q8NEM8 1001 aa17.68■□□□□ 0.42
GTF3C1-211ENST00000569653 HHIPL1Q96JK4 782 aa17.68■□□□□ 0.42
GTF3C1-211ENST00000569653 TSKSQ9UJT2 592 aa17.68■□□□□ 0.42
GTF3C1-211ENST00000569653 SCAF8Q9UPN6 1271 aaKnown RBP17.68■□□□□ 0.42
GTF3C1-211ENST00000569653 CASP8AP2Q9UKL3 1982 aa17.68■□□□□ 0.42
GTF3C1-211ENST00000569653 MAP2K1Q02750 393 aaPredicted RBP17.67■□□□□ 0.42
GTF3C1-211ENST00000569653 USP17L3A6NCW0 530 aa17.66■□□□□ 0.42
GTF3C1-211ENST00000569653 USP17L4A6NCW7 530 aa17.66■□□□□ 0.42
GTF3C1-211ENST00000569653 G3V3G9 751 aa17.66■□□□□ 0.42
GTF3C1-211ENST00000569653 SCARF1Q14162 830 aa17.66■□□□□ 0.42
GTF3C1-211ENST00000569653 DCAF8Q5TAQ9 597 aa17.66■□□□□ 0.42
GTF3C1-211ENST00000569653 USP17L1Q7RTZ2 530 aa17.66■□□□□ 0.42
GTF3C1-211ENST00000569653 PODNQ7Z5L7 613 aa17.66■□□□□ 0.42
GTF3C1-211ENST00000569653 MYH16Q9H6N6 1097 aa17.66■□□□□ 0.42
GTF3C1-211ENST00000569653 FAM155AB1AL88 458 aaPredicted RBP17.65■□□□□ 0.42
GTF3C1-211ENST00000569653 IGHMBP2P38935 993 aaKnown RBP17.65■□□□□ 0.42
GTF3C1-211ENST00000569653 HUNKP57058 714 aa17.65■□□□□ 0.42
GTF3C1-211ENST00000569653 ANGEL2Q5VTE6 544 aaKnown RBP17.65■□□□□ 0.42
GTF3C1-211ENST00000569653 MYOZ2Q9NPC6 264 aa17.65■□□□□ 0.42
GTF3C1-211ENST00000569653 ZNF804BA4D1E1 1349 aa17.65■□□□□ 0.42
GTF3C1-211ENST00000569653 USP17L8P0C7I0 530 aa17.64■□□□□ 0.41
GTF3C1-211ENST00000569653 MAP2K2P36507 400 aa17.64■□□□□ 0.41
GTF3C1-211ENST00000569653 CHRNDQ07001 517 aa17.64■□□□□ 0.41
GTF3C1-211ENST00000569653 HELBQ8NG08 1087 aaPredicted RBP17.64■□□□□ 0.41
GTF3C1-211ENST00000569653 DCPSQ96C86 337 aaKnown RBP17.64■□□□□ 0.41
GTF3C1-211ENST00000569653 CDCA5Q96FF9 252 aa17.64■□□□□ 0.41
GTF3C1-211ENST00000569653 KAZALD1Q96I82 304 aa17.64■□□□□ 0.41
GTF3C1-211ENST00000569653 GBA2Q9HCG7 927 aaPredicted RBP17.64■□□□□ 0.41
GTF3C1-211ENST00000569653 LEMD3Q9Y2U8 911 aa17.64■□□□□ 0.41
GTF3C1-211ENST00000569653 TAF5LO75529 589 aa17.63■□□□□ 0.41
GTF3C1-211ENST00000569653 NBPF9Q3BBW0 867 aa17.63■□□□□ 0.41
GTF3C1-211ENST00000569653 ZNF594Q96JF6 807 aaPredicted RBP17.63■□□□□ 0.41
GTF3C1-211ENST00000569653 COA1Q9GZY4 146 aa17.63■□□□□ 0.41
GTF3C1-211ENST00000569653 PAPPA2Q9BXP8 1791 aa17.63■□□□□ 0.41
GTF3C1-211ENST00000569653 LMBR1LQ6UX01 489 aa17.62■□□□□ 0.41
GTF3C1-211ENST00000569653 ANKRD18BA2A2Z9 1011 aa17.61■□□□□ 0.41
GTF3C1-211ENST00000569653 GRM8O00222 908 aa17.61■□□□□ 0.41
GTF3C1-211ENST00000569653 STRIP1Q5VSL9 837 aa17.61■□□□□ 0.41
GTF3C1-211ENST00000569653 PRAMEF18Q5VWM3 479 aa17.61■□□□□ 0.41
GTF3C1-211ENST00000569653 SULF1Q8IWU6 871 aa17.61■□□□□ 0.41
GTF3C1-211ENST00000569653 CERS5Q8N5B7 392 aa17.61■□□□□ 0.41
GTF3C1-211ENST00000569653 MPHOSPH8Q99549 860 aa17.61■□□□□ 0.41
GTF3C1-211ENST00000569653 ANKRD2Q9GZV1 360 aa17.61■□□□□ 0.41
GTF3C1-211ENST00000569653 ECM29Q5VYK3 1845 aa17.61■□□□□ 0.41
GTF3C1-211ENST00000569653 BRPF1P55201 1214 aaPredicted RBP17.6■□□□□ 0.41
GTF3C1-211ENST00000569653 RGMBQ6NW40 437 aa17.6■□□□□ 0.41
GTF3C1-211ENST00000569653 MOB2Q70IA6 237 aa17.6■□□□□ 0.41
GTF3C1-211ENST00000569653 MRPL50Q8N5N7 158 aaKnown RBP17.6■□□□□ 0.41
GTF3C1-211ENST00000569653 FBXW7Q969H0 707 aa17.6■□□□□ 0.41
GTF3C1-211ENST00000569653 SUCLG2Q96I99 432 aa17.6■□□□□ 0.41
GTF3C1-211ENST00000569653 AKAP11Q9UKA4 1901 aa17.59■□□□□ 0.41
GTF3C1-211ENST00000569653 PITPNM2Q9BZ72 1349 aa17.59■□□□□ 0.41
GTF3C1-211ENST00000569653 WNT10BO00744 389 aa17.59■□□□□ 0.41
GTF3C1-211ENST00000569653 SASH1O94885 1247 aa17.59■□□□□ 0.41
GTF3C1-211ENST00000569653 NBPF7P0C2Y1 421 aaPredicted RBP17.59■□□□□ 0.41
GTF3C1-211ENST00000569653 IFIT5Q13325 482 aaKnown RBP17.59■□□□□ 0.41
GTF3C1-211ENST00000569653 SLC4A10Q6U841 1118 aa17.59■□□□□ 0.41
GTF3C1-211ENST00000569653 ZBED3Q96IU2 234 aaPredicted RBP17.59■□□□□ 0.41
GTF3C1-211ENST00000569653 CD209Q9NNX6 404 aa17.59■□□□□ 0.41
GTF3C1-211ENST00000569653 CHMP3Q9Y3E7 222 aa17.59■□□□□ 0.41
GTF3C1-211ENST00000569653 PCDHAC2Q9Y5I4 1007 aa17.59■□□□□ 0.41
GTF3C1-211ENST00000569653 AOX1Q06278 1338 aa17.58■□□□□ 0.4
GTF3C1-211ENST00000569653 ALDH1L1O75891 902 aa17.58■□□□□ 0.4
GTF3C1-211ENST00000569653 GTF2IP78347 998 aa17.58■□□□□ 0.4
GTF3C1-211ENST00000569653 NOGQ13253 232 aa17.58■□□□□ 0.4
GTF3C1-211ENST00000569653 TTLL5Q6EMB2 1281 aa17.58■□□□□ 0.4
GTF3C1-211ENST00000569653 C15orf52Q6ZUT6 534 aaKnown RBP17.58■□□□□ 0.4
GTF3C1-211ENST00000569653 C2orf69Q8N8R5 385 aa17.58■□□□□ 0.4
GTF3C1-211ENST00000569653 SLC10A3P09131 477 aa17.57■□□□□ 0.4
GTF3C1-211ENST00000569653 KIAA0825Q8IV33 1275 aa17.57■□□□□ 0.4
GTF3C1-211ENST00000569653 CDCA7LQ96GN5 454 aa17.57■□□□□ 0.4
GTF3C1-211ENST00000569653 PUS3Q9BZE2 481 aaKnown RBP17.57■□□□□ 0.4
GTF3C1-211ENST00000569653 ARAP2Q8WZ64 1704 aa17.57■□□□□ 0.4
GTF3C1-211ENST00000569653 UTYO14607 1347 aa17.56■□□□□ 0.4
GTF3C1-211ENST00000569653 KIF23Q02241 960 aaPredicted RBP17.56■□□□□ 0.4
GTF3C1-211ENST00000569653 ANKRD44Q8N8A2 993 aa17.56■□□□□ 0.4
GTF3C1-211ENST00000569653 SSH1Q8WYL5 1049 aa17.56■□□□□ 0.4
GTF3C1-211ENST00000569653 ABHD8Q96I13 439 aa17.56■□□□□ 0.4
GTF3C1-211ENST00000569653 BEGAINQ9BUH8 593 aa17.56■□□□□ 0.4
GTF3C1-211ENST00000569653 SRCIN1Q9C0H9 1055 aa17.56■□□□□ 0.4
GTF3C1-211ENST00000569653 JAG2Q9Y219 1238 aa17.56■□□□□ 0.4
GTF3C1-211ENST00000569653 MYO3BQ8WXR4 1341 aa17.55■□□□□ 0.4
GTF3C1-211ENST00000569653 KCNJ4P48050 445 aa17.55■□□□□ 0.4
GTF3C1-211ENST00000569653 ZNF157P51786 506 aaPredicted RBP17.55■□□□□ 0.4
GTF3C1-211ENST00000569653 SLFN5Q08AF3 891 aa17.55■□□□□ 0.4
GTF3C1-211ENST00000569653 RASAL3Q86YV0 1011 aa17.55■□□□□ 0.4
GTF3C1-211ENST00000569653 C9orf78Q9NZ63 289 aaPredicted RBP17.55■□□□□ 0.4
GTF3C1-211ENST00000569653 SSC5DA1L4H1 1573 aa17.54■□□□□ 0.4
GTF3C1-211ENST00000569653 IL1R1P14778 569 aa17.54■□□□□ 0.4
GTF3C1-211ENST00000569653 UBE2Q2LH0YL09 131 aa17.53■□□□□ 0.4
GTF3C1-211ENST00000569653 PLIN1O60240 522 aa17.53■□□□□ 0.4
GTF3C1-211ENST00000569653 CCDC57Q2TAC2 916 aa17.53■□□□□ 0.4
GTF3C1-211ENST00000569653 RABL6Q3YEC7 729 aaPredicted RBP17.53■□□□□ 0.4
GTF3C1-211ENST00000569653 LDHAL6AQ6ZMR3 332 aa17.53■□□□□ 0.4
GTF3C1-211ENST00000569653 CSRNP1Q96S65 589 aa17.53■□□□□ 0.4
GTF3C1-211ENST00000569653 BICC1Q9H694 974 aaKnown RBP17.53■□□□□ 0.4
GTF3C1-211ENST00000569653 CA12O43570 354 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms