RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 PPP2R3BQ9Y5P8 575 aa11.29□□□□□ -0.6
SMG1-216ENST00000569122 ATP5J2-PTCD1G3V325 749 aa11.28□□□□□ -0.6
SMG1-216ENST00000569122 HOXB7P09629 217 aa11.28□□□□□ -0.6
SMG1-216ENST00000569122 RIPK4P57078 832 aa11.28□□□□□ -0.6
SMG1-216ENST00000569122 PRKG1Q13976 671 aa11.28□□□□□ -0.6
SMG1-216ENST00000569122 SLC9C1Q4G0N8 1177 aa11.28□□□□□ -0.6
SMG1-216ENST00000569122 CD99L2Q8TCZ2 262 aa11.28□□□□□ -0.6
SMG1-216ENST00000569122 ZNF333Q96JL9 665 aa11.28□□□□□ -0.6
SMG1-216ENST00000569122 CDC5LQ99459 802 aaKnown RBP11.28□□□□□ -0.6
SMG1-216ENST00000569122 COA1Q9GZY4 146 aa11.28□□□□□ -0.6
SMG1-216ENST00000569122 ANKRD36CQ5JPF3 1778 aa11.28□□□□□ -0.6
SMG1-216ENST00000569122 PDE8AO60658 829 aa11.27□□□□□ -0.61
SMG1-216ENST00000569122 RTL5Q5HYW3 569 aaPredicted RBP11.27□□□□□ -0.61
SMG1-216ENST00000569122 DACT2Q5SW24 774 aa11.27□□□□□ -0.61
SMG1-216ENST00000569122 HDGFL1Q5TGJ6 251 aa11.27□□□□□ -0.61
SMG1-216ENST00000569122 FBXW7Q969H0 707 aa11.27□□□□□ -0.61
SMG1-216ENST00000569122 WNK4Q96J92 1243 aa11.27□□□□□ -0.61
SMG1-216ENST00000569122 DEFB129Q9H1M3 183 aa11.27□□□□□ -0.61
SMG1-216ENST00000569122 CHPF2Q9P2E5 772 aa11.27□□□□□ -0.61
SMG1-216ENST00000569122 SCAF8Q9UPN6 1271 aaKnown RBP11.27□□□□□ -0.61
SMG1-216ENST00000569122 H0YGN5 161 aa11.26□□□□□ -0.61
SMG1-216ENST00000569122 MYO1BO43795 1136 aa11.26□□□□□ -0.61
SMG1-216ENST00000569122 IREB2P48200 963 aaKnown RBP11.26□□□□□ -0.61
SMG1-216ENST00000569122 GOLGA2Q08379 1002 aa11.26□□□□□ -0.61
SMG1-216ENST00000569122 CRHR2Q13324 411 aa11.26□□□□□ -0.61
SMG1-216ENST00000569122 TTLL5Q6EMB2 1281 aa11.26□□□□□ -0.61
SMG1-216ENST00000569122 RIC3Q7Z5B4 369 aa11.26□□□□□ -0.61
SMG1-216ENST00000569122 CCDC191Q8NCU4 936 aa11.26□□□□□ -0.61
SMG1-216ENST00000569122 CCER1Q8TC90 406 aaPredicted RBP11.26□□□□□ -0.61
SMG1-216ENST00000569122 OTUD5Q96G74 571 aa11.26□□□□□ -0.61
SMG1-216ENST00000569122 CHMP4AQ9BY43 222 aa11.26□□□□□ -0.61
SMG1-216ENST00000569122 SEC31BQ9NQW1 1179 aa11.26□□□□□ -0.61
SMG1-216ENST00000569122 MED23Q9ULK4 1368 aa11.26□□□□□ -0.61
SMG1-216ENST00000569122 LRRC37AA6NMS7 1700 aa11.26□□□□□ -0.61
SMG1-216ENST00000569122 COL1A1P02452 1464 aaPredicted RBP11.25□□□□□ -0.61
SMG1-216ENST00000569122 IGF2BP3O00425 579 aaKnown RBP eCLIP11.25□□□□□ -0.61
SMG1-216ENST00000569122 GNRH1P01148 92 aa11.25□□□□□ -0.61
SMG1-216ENST00000569122 KIF22Q14807 665 aa11.25□□□□□ -0.61
SMG1-216ENST00000569122 DLGAP5Q15398 846 aa11.25□□□□□ -0.61
SMG1-216ENST00000569122 ZFYVE28Q9HCC9 887 aa11.25□□□□□ -0.61
SMG1-216ENST00000569122 BSDC1Q9NW68 430 aaPredicted RBP11.25□□□□□ -0.61
SMG1-216ENST00000569122 LEMD3Q9Y2U8 911 aa11.25□□□□□ -0.61
SMG1-216ENST00000569122 KDM3BQ7LBC6 1761 aa11.25□□□□□ -0.61
SMG1-216ENST00000569122 POLR2AP24928 1970 aaKnown RBP11.25□□□□□ -0.61
SMG1-216ENST00000569122 TESPA1A2RU30 521 aaPredicted RBP11.24□□□□□ -0.61
SMG1-216ENST00000569122 CHL1O00533 1208 aa11.24□□□□□ -0.61
SMG1-216ENST00000569122 SASH1O94885 1247 aa11.24□□□□□ -0.61
SMG1-216ENST00000569122 PCCAP05165 728 aaPredicted RBP11.24□□□□□ -0.61
SMG1-216ENST00000569122 PRMT2P55345 433 aa11.24□□□□□ -0.61
SMG1-216ENST00000569122 CHRDL2Q6WN34 429 aa11.24□□□□□ -0.61
SMG1-216ENST00000569122 ANKRD13AQ8IZ07 590 aa11.24□□□□□ -0.61
SMG1-216ENST00000569122 NKX2-3Q8TAU0 364 aa11.24□□□□□ -0.61
SMG1-216ENST00000569122 DPF3Q92784 378 aa11.24□□□□□ -0.61
SMG1-216ENST00000569122 ZNF428Q96B54 188 aa11.24□□□□□ -0.61
SMG1-216ENST00000569122 DDX60Q8IY21 1712 aaKnown RBP11.23□□□□□ -0.61
SMG1-216ENST00000569122 CCT4P50991 539 aaKnown RBP11.23□□□□□ -0.61
SMG1-216ENST00000569122 MTMR14Q8NCE2 650 aa11.23□□□□□ -0.61
SMG1-216ENST00000569122 HTATIP2Q9BUP3 242 aa11.23□□□□□ -0.61
SMG1-216ENST00000569122 CWC25Q9NXE8 425 aaPredicted RBP11.23□□□□□ -0.61
SMG1-216ENST00000569122 NR2E3Q9Y5X4 410 aa11.23□□□□□ -0.61
SMG1-216ENST00000569122 HTTP42858 3142 aa11.22□□□□□ -0.61
SMG1-216ENST00000569122 A0A1W2PPC1 479 aa11.22□□□□□ -0.61
SMG1-216ENST00000569122 KIAA0825Q8IV33 1275 aa11.22□□□□□ -0.61
SMG1-216ENST00000569122 ZBED3Q96IU2 234 aaPredicted RBP11.22□□□□□ -0.61
SMG1-216ENST00000569122 ANKRD2Q9GZV1 360 aa11.22□□□□□ -0.61
SMG1-216ENST00000569122 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.22□□□□□ -0.61
SMG1-216ENST00000569122 MINPP1Q9UNW1 487 aa11.22□□□□□ -0.61
SMG1-216ENST00000569122 ZNF804BA4D1E1 1349 aa11.21□□□□□ -0.61
SMG1-216ENST00000569122 DDX58O95786 925 aaKnown RBP11.21□□□□□ -0.61
SMG1-216ENST00000569122 CAPN2P17655 700 aa11.21□□□□□ -0.61
SMG1-216ENST00000569122 IGHMBP2P38935 993 aaKnown RBP11.21□□□□□ -0.61
SMG1-216ENST00000569122 TMPOP42166 694 aaKnown RBP11.21□□□□□ -0.61
SMG1-216ENST00000569122 MNX1P50219 401 aaPredicted RBP11.21□□□□□ -0.61
SMG1-216ENST00000569122 GTF2A2P52657 109 aa11.21□□□□□ -0.61
SMG1-216ENST00000569122 TNFAIP1Q13829 316 aa11.21□□□□□ -0.61
SMG1-216ENST00000569122 CLMNQ96JQ2 1002 aa11.21□□□□□ -0.61
SMG1-216ENST00000569122 MXD3Q9BW11 206 aa11.21□□□□□ -0.61
SMG1-216ENST00000569122 RBM27Q9P2N5 1060 aaKnown RBP11.21□□□□□ -0.61
SMG1-216ENST00000569122 LAS1LQ9Y4W2 734 aaKnown RBP11.21□□□□□ -0.61
SMG1-216ENST00000569122 PTCH2Q9Y6C5 1203 aa11.21□□□□□ -0.61
SMG1-216ENST00000569122 KIAA0100Q14667 2235 aaKnown RBP11.21□□□□□ -0.62
SMG1-216ENST00000569122 HOXD10P28358 340 aa11.2□□□□□ -0.62
SMG1-216ENST00000569122 GTF2IP78347 998 aa11.2□□□□□ -0.62
SMG1-216ENST00000569122 TAF1CQ15572 869 aaPredicted RBP11.2□□□□□ -0.62
SMG1-216ENST00000569122 HELBQ8NG08 1087 aaPredicted RBP11.2□□□□□ -0.62
SMG1-216ENST00000569122 CCDC85AQ96PX6 553 aaPredicted RBP11.2□□□□□ -0.62
SMG1-216ENST00000569122 PTPN18Q99952 460 aa11.2□□□□□ -0.62
SMG1-216ENST00000569122 ZCCHC17Q9NP64 241 aaKnown RBP11.2□□□□□ -0.62
SMG1-216ENST00000569122 CENPFP49454 3210 aa11.2□□□□□ -0.62
SMG1-216ENST00000569122 KCNJ4P48050 445 aa11.19□□□□□ -0.62
SMG1-216ENST00000569122 CTSWP56202 376 aa11.19□□□□□ -0.62
SMG1-216ENST00000569122 OPTNQ96CV9 577 aa11.19□□□□□ -0.62
SMG1-216ENST00000569122 MYD88Q99836 296 aa11.19□□□□□ -0.62
SMG1-216ENST00000569122 LAMB2P55268 1798 aa11.18□□□□□ -0.62
SMG1-216ENST00000569122 USP2O75604 605 aaPredicted RBP11.18□□□□□ -0.62
SMG1-216ENST00000569122 FKBP1AP62942 108 aaKnown RBP11.18□□□□□ -0.62
SMG1-216ENST00000569122 DUSP27Q5VZP5 1158 aa11.18□□□□□ -0.62
SMG1-216ENST00000569122 MS4A4AQ96JQ5 239 aa11.18□□□□□ -0.62
SMG1-216ENST00000569122 MPHOSPH8Q99549 860 aa11.18□□□□□ -0.62
SMG1-216ENST00000569122 VEZTQ9HBM0 779 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms