RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 CDCA5Q96FF9 252 aa24.12■■□□□ 1.45
ABCA3-204ENST00000566200 USP17L8P0C7I0 530 aa24.11■■□□□ 1.45
ABCA3-204ENST00000566200 TXNRD3Q86VQ6 643 aa24.11■■□□□ 1.45
ABCA3-204ENST00000566200 PLA2G12BQ9BX93 195 aa24.11■■□□□ 1.45
ABCA3-204ENST00000566200 MRS2Q9HD23 443 aa24.11■■□□□ 1.45
ABCA3-204ENST00000566200 MYOZ2Q9NPC6 264 aa24.11■■□□□ 1.45
ABCA3-204ENST00000566200 MXD3Q9BW11 206 aa24.1■■□□□ 1.45
ABCA3-204ENST00000566200 A0A1B0GUL6 1792 aa24.09■■□□□ 1.45
ABCA3-204ENST00000566200 VAMP4O75379 141 aa24.09■■□□□ 1.45
ABCA3-204ENST00000566200 FAM161AQ3B820 660 aa24.09■■□□□ 1.45
ABCA3-204ENST00000566200 DACT2Q5SW24 774 aa24.09■■□□□ 1.45
ABCA3-204ENST00000566200 DNAAF4Q8WXU2 420 aa24.09■■□□□ 1.45
ABCA3-204ENST00000566200 CSF1RP07333 972 aa24.08■■□□□ 1.45
ABCA3-204ENST00000566200 ITGA6P23229 1130 aa24.08■■□□□ 1.45
ABCA3-204ENST00000566200 KLRK1P26718 216 aa24.08■■□□□ 1.45
ABCA3-204ENST00000566200 FKBP5Q13451 457 aaPredicted RBP24.08■■□□□ 1.45
ABCA3-204ENST00000566200 SCAF8Q9UPN6 1271 aaKnown RBP24.08■■□□□ 1.45
ABCA3-204ENST00000566200 SALL2Q9Y467 1007 aaPredicted RBP24.08■■□□□ 1.45
ABCA3-204ENST00000566200 PAPPA2Q9BXP8 1791 aa24.07■■□□□ 1.44
ABCA3-204ENST00000566200 ZNF157P51786 506 aaPredicted RBP24.07■■□□□ 1.44
ABCA3-204ENST00000566200 KIF23Q02241 960 aaPredicted RBP24.07■■□□□ 1.44
ABCA3-204ENST00000566200 LINS1Q8NG48 757 aa24.07■■□□□ 1.44
ABCA3-204ENST00000566200 CCDC102AQ96A19 550 aa24.07■■□□□ 1.44
ABCA3-204ENST00000566200 PITPNM2Q9BZ72 1349 aa24.07■■□□□ 1.44
ABCA3-204ENST00000566200 IGHMBP2P38935 993 aaKnown RBP24.06■■□□□ 1.44
ABCA3-204ENST00000566200 EXOSC9Q06265 439 aaKnown RBP24.06■■□□□ 1.44
ABCA3-204ENST00000566200 WDR63Q8IWG1 891 aa24.06■■□□□ 1.44
ABCA3-204ENST00000566200 SPINK5Q9NQ38 1064 aaPredicted RBP24.06■■□□□ 1.44
ABCA3-204ENST00000566200 LEMD3Q9Y2U8 911 aa24.06■■□□□ 1.44
ABCA3-204ENST00000566200 SLC10A3P09131 477 aa24.05■■□□□ 1.44
ABCA3-204ENST00000566200 NBPF9Q3BBW0 867 aa24.05■■□□□ 1.44
ABCA3-204ENST00000566200 COA1Q9GZY4 146 aa24.05■■□□□ 1.44
ABCA3-204ENST00000566200 MYH16Q9H6N6 1097 aa24.05■■□□□ 1.44
ABCA3-204ENST00000566200 STRIP1Q5VSL9 837 aa24.04■■□□□ 1.44
ABCA3-204ENST00000566200 MCOLN1Q9GZU1 580 aa24.04■■□□□ 1.44
ABCA3-204ENST00000566200 ZNF804BA4D1E1 1349 aa24.04■■□□□ 1.44
ABCA3-204ENST00000566200 AKAP11Q9UKA4 1901 aa24.03■■□□□ 1.44
ABCA3-204ENST00000566200 CCDC85CA6NKD9 419 aa24.02■■□□□ 1.44
ABCA3-204ENST00000566200 F6X3S4 739 aa24.02■■□□□ 1.44
ABCA3-204ENST00000566200 FOXO4P98177 505 aa24.02■■□□□ 1.44
ABCA3-204ENST00000566200 PRAMEF18Q5VWM3 479 aa24.02■■□□□ 1.44
ABCA3-204ENST00000566200 MOB2Q70IA6 237 aa24.02■■□□□ 1.44
ABCA3-204ENST00000566200 RASAL3Q86YV0 1011 aa24.02■■□□□ 1.44
ABCA3-204ENST00000566200 FBXW7Q969H0 707 aa24.02■■□□□ 1.44
ABCA3-204ENST00000566200 ANKRD2Q9GZV1 360 aa24.02■■□□□ 1.44
ABCA3-204ENST00000566200 IRS2Q9Y4H2 1338 aa24.02■■□□□ 1.44
ABCA3-204ENST00000566200 WNT10BO00744 389 aa24.01■■□□□ 1.43
ABCA3-204ENST00000566200 CHRNDQ07001 517 aa24.01■■□□□ 1.43
ABCA3-204ENST00000566200 CSRNP1Q96S65 589 aa24.01■■□□□ 1.43
ABCA3-204ENST00000566200 MPHOSPH8Q99549 860 aa24.01■■□□□ 1.43
ABCA3-204ENST00000566200 SAGE1Q9NXZ1 904 aa24.01■■□□□ 1.43
ABCA3-204ENST00000566200 MYO3BQ8WXR4 1341 aa24.01■■□□□ 1.43
ABCA3-204ENST00000566200 SNAP23O00161 211 aa24■■□□□ 1.43
ABCA3-204ENST00000566200 FKBP1BP68106 108 aa24■■□□□ 1.43
ABCA3-204ENST00000566200 BEND3Q5T5X7 828 aa24■■□□□ 1.43
ABCA3-204ENST00000566200 RNF186Q9NXI6 227 aa24■■□□□ 1.43
ABCA3-204ENST00000566200 ANP32CO43423 234 aa23.99■■□□□ 1.43
ABCA3-204ENST00000566200 SASH1O94885 1247 aa23.99■■□□□ 1.43
ABCA3-204ENST00000566200 TTLL5Q6EMB2 1281 aa23.99■■□□□ 1.43
ABCA3-204ENST00000566200 TRPA1O75762 1119 aa23.98■■□□□ 1.43
ABCA3-204ENST00000566200 DGKZQ13574 1117 aa23.98■■□□□ 1.43
ABCA3-204ENST00000566200 OGFOD1Q8N543 542 aa23.98■■□□□ 1.43
ABCA3-204ENST00000566200 ANKRD18BA2A2Z9 1011 aa23.97■■□□□ 1.43
ABCA3-204ENST00000566200 UBE2Q2LH0YL09 131 aa23.97■■□□□ 1.43
ABCA3-204ENST00000566200 TAF5LO75529 589 aa23.97■■□□□ 1.43
ABCA3-204ENST00000566200 GTF2IP78347 998 aa23.97■■□□□ 1.43
ABCA3-204ENST00000566200 EPHA10Q5JZY3 1008 aa23.97■■□□□ 1.43
ABCA3-204ENST00000566200 CD209Q9NNX6 404 aa23.97■■□□□ 1.43
ABCA3-204ENST00000566200 ZNF316A6NFI3 1004 aaPredicted RBP23.96■■□□□ 1.43
ABCA3-204ENST00000566200 KIAA0825Q8IV33 1275 aa23.96■■□□□ 1.43
ABCA3-204ENST00000566200 HELBQ8NG08 1087 aaPredicted RBP23.96■■□□□ 1.43
ABCA3-204ENST00000566200 ZBED3Q96IU2 234 aaPredicted RBP23.96■■□□□ 1.43
ABCA3-204ENST00000566200 RGS19P49795 217 aa23.95■■□□□ 1.42
ABCA3-204ENST00000566200 C15orf52Q6ZUT6 534 aaKnown RBP23.95■■□□□ 1.42
ABCA3-204ENST00000566200 CERS5Q8N5B7 392 aa23.95■■□□□ 1.42
ABCA3-204ENST00000566200 KCNJ4P48050 445 aa23.94■■□□□ 1.42
ABCA3-204ENST00000566200 IFIT5Q13325 482 aaKnown RBP23.94■■□□□ 1.42
ABCA3-204ENST00000566200 MMP14P50281 582 aa23.93■■□□□ 1.42
ABCA3-204ENST00000566200 LMBR1LQ6UX01 489 aa23.93■■□□□ 1.42
ABCA3-204ENST00000566200 ECM29Q5VYK3 1845 aa23.93■■□□□ 1.42
ABCA3-204ENST00000566200 GRM8O00222 908 aa23.92■■□□□ 1.42
ABCA3-204ENST00000566200 ZNF594Q96JF6 807 aaPredicted RBP23.92■■□□□ 1.42
ABCA3-204ENST00000566200 CHMP3Q9Y3E7 222 aa23.92■■□□□ 1.42
ABCA3-204ENST00000566200 HDAC9Q9UKV0 1011 aa23.91■■□□□ 1.42
ABCA3-204ENST00000566200 PCDHAC2Q9Y5I4 1007 aa23.91■■□□□ 1.42
ABCA3-204ENST00000566200 IL1R1P14778 569 aa23.9■■□□□ 1.42
ABCA3-204ENST00000566200 ZEB1P37275 1124 aaPredicted RBP23.9■■□□□ 1.42
ABCA3-204ENST00000566200 REM2Q8IYK8 340 aaPredicted RBP23.9■■□□□ 1.42
ABCA3-204ENST00000566200 FAM9BQ8IZU0 186 aa23.9■■□□□ 1.42
ABCA3-204ENST00000566200 APOBEC3FQ8IUX4 373 aaKnown RBP23.89■■□□□ 1.41
ABCA3-204ENST00000566200 ZNF521Q96K83 1311 aa23.88■■□□□ 1.41
ABCA3-204ENST00000566200 TTLL12Q14166 644 aaPredicted RBP23.88■■□□□ 1.41
ABCA3-204ENST00000566200 KAZALD1Q96I82 304 aa23.88■■□□□ 1.41
ABCA3-204ENST00000566200 SSC5DA1L4H1 1573 aa23.87■■□□□ 1.41
ABCA3-204ENST00000566200 MLLT1Q03111 559 aaPredicted RBP23.87■■□□□ 1.41
ABCA3-204ENST00000566200 PTPN12Q05209 780 aaKnown RBP23.87■■□□□ 1.41
ABCA3-204ENST00000566200 CCDC57Q2TAC2 916 aa23.87■■□□□ 1.41
ABCA3-204ENST00000566200 LDHAL6AQ6ZMR3 332 aa23.87■■□□□ 1.41
ABCA3-204ENST00000566200 MTMR14Q8NCE2 650 aa23.87■■□□□ 1.41
ABCA3-204ENST00000566200 FZD1Q9UP38 647 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms