RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 ARAP2Q8WZ64 1704 aa18.63■□□□□ 0.57
SNX29-203ENST00000564111 MROH5Q6ZUA9 1318 aa18.63■□□□□ 0.57
SNX29-203ENST00000564111 PITPNM2Q9BZ72 1349 aa18.63■□□□□ 0.57
SNX29-203ENST00000564111 TRPM4Q8TD43 1214 aa18.62■□□□□ 0.57
SNX29-203ENST00000564111 ZBTB12Q9Y330 459 aaPredicted RBP18.62■□□□□ 0.57
SNX29-203ENST00000564111 USP17L8P0C7I0 530 aa18.62■□□□□ 0.57
SNX29-203ENST00000564111 SUCLG2Q96I99 432 aa18.62■□□□□ 0.57
SNX29-203ENST00000564111 HDAC9Q9UKV0 1011 aa18.62■□□□□ 0.57
SNX29-203ENST00000564111 ABT1Q9ULW3 272 aaKnown RBP18.62■□□□□ 0.57
SNX29-203ENST00000564111 IPO8O15397 1037 aaKnown RBP18.61■□□□□ 0.57
SNX29-203ENST00000564111 FKBP1AP62942 108 aaKnown RBP18.61■□□□□ 0.57
SNX29-203ENST00000564111 DEFB115Q30KQ5 88 aa18.61■□□□□ 0.57
SNX29-203ENST00000564111 UBE4AQ14139 1066 aa18.61■□□□□ 0.57
SNX29-203ENST00000564111 OGFOD1Q8N543 542 aa18.61■□□□□ 0.57
SNX29-203ENST00000564111 GMLQ99445 158 aa18.61■□□□□ 0.57
SNX29-203ENST00000564111 TLL2Q9Y6L7 1015 aa18.6■□□□□ 0.57
SNX29-203ENST00000564111 ECM29Q5VYK3 1845 aa18.6■□□□□ 0.57
SNX29-203ENST00000564111 EPHA10Q5JZY3 1008 aa18.59■□□□□ 0.57
SNX29-203ENST00000564111 DACT2Q5SW24 774 aa18.59■□□□□ 0.57
SNX29-203ENST00000564111 MKRN1Q9UHC7 482 aaKnown RBP18.59■□□□□ 0.57
SNX29-203ENST00000564111 HIRAP54198 1017 aaPredicted RBP18.59■□□□□ 0.57
SNX29-203ENST00000564111 TBC1D10BQ4KMP7 808 aaPredicted RBP18.59■□□□□ 0.57
SNX29-203ENST00000564111 COL1A1P02452 1464 aaPredicted RBP18.58■□□□□ 0.57
SNX29-203ENST00000564111 NBPF7P0C2Y1 421 aaPredicted RBP18.58■□□□□ 0.57
SNX29-203ENST00000564111 SULF1Q8IWU6 871 aa18.58■□□□□ 0.57
SNX29-203ENST00000564111 AIDAQ96BJ3 306 aa18.58■□□□□ 0.57
SNX29-203ENST00000564111 BICC1Q9H694 974 aaKnown RBP18.58■□□□□ 0.57
SNX29-203ENST00000564111 FBXO3Q9UK99 471 aa18.58■□□□□ 0.57
SNX29-203ENST00000564111 RARSP54136 660 aaKnown RBP18.58■□□□□ 0.56
SNX29-203ENST00000564111 MYOZ2Q9NPC6 264 aa18.58■□□□□ 0.56
SNX29-203ENST00000564111 CELF2O95319 508 aaKnown RBP18.57■□□□□ 0.56
SNX29-203ENST00000564111 SAMD7Q7Z3H4 446 aa18.57■□□□□ 0.56
SNX29-203ENST00000564111 KRT26Q7Z3Y9 468 aa18.57■□□□□ 0.56
SNX29-203ENST00000564111 FBXW7Q969H0 707 aa18.57■□□□□ 0.56
SNX29-203ENST00000564111 GLIS2Q9BZE0 524 aaPredicted RBP18.57■□□□□ 0.56
SNX29-203ENST00000564111 CD209Q9NNX6 404 aa18.57■□□□□ 0.56
SNX29-203ENST00000564111 KCNQ5Q9NR82 932 aa18.57■□□□□ 0.56
SNX29-203ENST00000564111 UBTFL1P0CB47 393 aaPredicted RBP18.57■□□□□ 0.56
SNX29-203ENST00000564111 IL1R1P14778 569 aa18.57■□□□□ 0.56
SNX29-203ENST00000564111 TTLL5Q6EMB2 1281 aa18.57■□□□□ 0.56
SNX29-203ENST00000564111 USP44Q9H0E7 712 aa18.57■□□□□ 0.56
SNX29-203ENST00000564111 IRS2Q9Y4H2 1338 aa18.57■□□□□ 0.56
SNX29-203ENST00000564111 ANKRD44Q8N8A2 993 aa18.56■□□□□ 0.56
SNX29-203ENST00000564111 KAZALD1Q96I82 304 aa18.56■□□□□ 0.56
SNX29-203ENST00000564111 NOB1Q9ULX3 412 aaKnown RBP18.56■□□□□ 0.56
SNX29-203ENST00000564111 PAPPA2Q9BXP8 1791 aa18.56■□□□□ 0.56
SNX29-203ENST00000564111 WDR33Q9C0J8 1336 aaKnown RBP18.55■□□□□ 0.56
SNX29-203ENST00000564111 HSPA1AP0DMV8 641 aaKnown RBP18.55■□□□□ 0.56
SNX29-203ENST00000564111 HSPA1BP0DMV9 641 aaKnown RBP18.55■□□□□ 0.56
SNX29-203ENST00000564111 MAP2K1Q02750 393 aaPredicted RBP18.55■□□□□ 0.56
SNX29-203ENST00000564111 MIER1Q8N108 512 aa18.55■□□□□ 0.56
SNX29-203ENST00000564111 TRAF5O00463 557 aa18.55■□□□□ 0.56
SNX29-203ENST00000564111 GNAI3P08754 354 aa18.55■□□□□ 0.56
SNX29-203ENST00000564111 VEGFBP49765 207 aa18.55■□□□□ 0.56
SNX29-203ENST00000564111 USP48Q86UV5 1035 aa18.55■□□□□ 0.56
SNX29-203ENST00000564111 GGA3Q9NZ52 723 aa18.55■□□□□ 0.56
SNX29-203ENST00000564111 POLR2AP24928 1970 aaKnown RBP18.54■□□□□ 0.56
SNX29-203ENST00000564111 FKBP1BP68106 108 aa18.54■□□□□ 0.56
SNX29-203ENST00000564111 SHTN1A0MZ66 631 aa18.54■□□□□ 0.56
SNX29-203ENST00000564111 HNRNPUQ00839 825 aaKnown RBP eCLIP18.54■□□□□ 0.56
SNX29-203ENST00000564111 RBM26Q5T8P6 1007 aaKnown RBP18.54■□□□□ 0.56
SNX29-203ENST00000564111 APOBEC3FQ8IUX4 373 aaKnown RBP18.54■□□□□ 0.56
SNX29-203ENST00000564111 C2orf69Q8N8R5 385 aa18.54■□□□□ 0.56
SNX29-203ENST00000564111 ZNF594Q96JF6 807 aaPredicted RBP18.54■□□□□ 0.56
SNX29-203ENST00000564111 RIPOR2Q9Y4F9 1068 aa18.54■□□□□ 0.56
SNX29-203ENST00000564111 FAM205AQ6ZU69 1335 aa18.53■□□□□ 0.56
SNX29-203ENST00000564111 TAF5LO75529 589 aa18.53■□□□□ 0.56
SNX29-203ENST00000564111 SCARF1Q14162 830 aa18.53■□□□□ 0.56
SNX29-203ENST00000564111 METTL24Q5JXM2 366 aa18.53■□□□□ 0.56
SNX29-203ENST00000564111 CST9Q5W186 159 aa18.53■□□□□ 0.56
SNX29-203ENST00000564111 INTS3Q68E01 1043 aaKnown RBP18.53■□□□□ 0.56
SNX29-203ENST00000564111 MYH13Q9UKX3 1938 aa18.53■□□□□ 0.56
SNX29-203ENST00000564111 ZBED9Q6R2W3 1325 aa18.53■□□□□ 0.56
SNX29-203ENST00000564111 MAP2K2P36507 400 aa18.53■□□□□ 0.56
SNX29-203ENST00000564111 GTF2IP78347 998 aa18.53■□□□□ 0.56
SNX29-203ENST00000564111 TXNRD3Q86VQ6 643 aa18.53■□□□□ 0.56
SNX29-203ENST00000564111 CAPNS2Q96L46 248 aa18.53■□□□□ 0.56
SNX29-203ENST00000564111 CAVIN4Q5BKX8 364 aa18.52■□□□□ 0.56
SNX29-203ENST00000564111 MTMR14Q8NCE2 650 aa18.52■□□□□ 0.56
SNX29-203ENST00000564111 HELBQ8NG08 1087 aaPredicted RBP18.52■□□□□ 0.56
SNX29-203ENST00000564111 HIBADHP31937 336 aaKnown RBP18.51■□□□□ 0.55
SNX29-203ENST00000564111 PAXIP1Q6ZW49 1069 aaPredicted RBP18.51■□□□□ 0.55
SNX29-203ENST00000564111 SAPCD2Q86UD0 394 aa18.51■□□□□ 0.55
SNX29-203ENST00000564111 GBA2Q9HCG7 927 aaPredicted RBP18.51■□□□□ 0.55
SNX29-203ENST00000564111 PLIN1O60240 522 aa18.51■□□□□ 0.55
SNX29-203ENST00000564111 CIAO1O76071 339 aa18.51■□□□□ 0.55
SNX29-203ENST00000564111 KLRK1P26718 216 aa18.51■□□□□ 0.55
SNX29-203ENST00000564111 NF2P35240 595 aa18.5■□□□□ 0.55
SNX29-203ENST00000564111 CTCFP49711 727 aaPredicted RBP18.5■□□□□ 0.55
SNX29-203ENST00000564111 PUM3Q15397 648 aaKnown RBP18.5■□□□□ 0.55
SNX29-203ENST00000564111 ANGEL2Q5VTE6 544 aaKnown RBP18.5■□□□□ 0.55
SNX29-203ENST00000564111 VPS37DQ86XT2 251 aa18.5■□□□□ 0.55
SNX29-203ENST00000564111 TBC1D22AQ8WUA7 517 aa18.5■□□□□ 0.55
SNX29-203ENST00000564111 ZNF408Q9H9D4 720 aa18.5■□□□□ 0.55
SNX29-203ENST00000564111 CA12O43570 354 aa18.5■□□□□ 0.55
SNX29-203ENST00000564111 SASH1O94885 1247 aa18.5■□□□□ 0.55
SNX29-203ENST00000564111 IFIT1P09914 478 aaKnown RBP18.5■□□□□ 0.55
SNX29-203ENST00000564111 TDRD7Q8NHU6 1098 aaKnown RBP18.5■□□□□ 0.55
SNX29-203ENST00000564111 BEGAINQ9BUH8 593 aa18.5■□□□□ 0.55
SNX29-203ENST00000564111 PPP2R3BQ9Y5P8 575 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms