RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 SKAP1Q86WV1 359 aa27.67■■■□□ 2.02
SYNGR3-202ENST00000562045 EYA3Q99504 573 aa27.67■■■□□ 2.02
SYNGR3-202ENST00000562045 VPS33BQ9H267 617 aa27.67■■■□□ 2.02
SYNGR3-202ENST00000562045 YDJCA8MPS7 323 aa27.67■■■□□ 2.02
SYNGR3-202ENST00000562045 SURF6O75683 361 aaKnown RBP27.67■■■□□ 2.02
SYNGR3-202ENST00000562045 MED23Q9ULK4 1368 aa27.66■■■□□ 2.02
SYNGR3-202ENST00000562045 FZD9O00144 591 aa27.66■■■□□ 2.02
SYNGR3-202ENST00000562045 PDE8BO95263 885 aa27.66■■■□□ 2.02
SYNGR3-202ENST00000562045 KCNJ4P48050 445 aa27.66■■■□□ 2.02
SYNGR3-202ENST00000562045 JDP2Q8WYK2 163 aa27.66■■■□□ 2.02
SYNGR3-202ENST00000562045 ZC3H12CQ9C0D7 883 aaKnown RBP27.66■■■□□ 2.02
SYNGR3-202ENST00000562045 NOP58Q9Y2X3 529 aaKnown RBP27.66■■■□□ 2.02
SYNGR3-202ENST00000562045 RAB11FIP3O75154 756 aa27.65■■■□□ 2.02
SYNGR3-202ENST00000562045 RGS3P49796 1198 aa27.65■■■□□ 2.02
SYNGR3-202ENST00000562045 NIM1KQ8IY84 436 aa27.65■■■□□ 2.02
SYNGR3-202ENST00000562045 LNPKQ9C0E8 428 aa27.65■■■□□ 2.02
SYNGR3-202ENST00000562045 KCNQ5Q9NR82 932 aa27.65■■■□□ 2.02
SYNGR3-202ENST00000562045 FBXO3Q9UK99 471 aa27.65■■■□□ 2.02
SYNGR3-202ENST00000562045 IL15P40933 162 aaPredicted RBP27.64■■■□□ 2.02
SYNGR3-202ENST00000562045 ZNF526Q8TF50 670 aaPredicted RBP27.64■■■□□ 2.01
SYNGR3-202ENST00000562045 APBB1O00213 710 aa27.63■■■□□ 2.01
SYNGR3-202ENST00000562045 LRRCC1Q9C099 1032 aa27.63■■■□□ 2.01
SYNGR3-202ENST00000562045 ECE2O60344 883 aa27.62■■■□□ 2.01
SYNGR3-202ENST00000562045 SASH1O94885 1247 aa27.62■■■□□ 2.01
SYNGR3-202ENST00000562045 FGFR2P21802 821 aa27.62■■■□□ 2.01
SYNGR3-202ENST00000562045 TFCP2Q12800 502 aa27.62■■■□□ 2.01
SYNGR3-202ENST00000562045 ZNRF3Q9ULT6 936 aa27.62■■■□□ 2.01
SYNGR3-202ENST00000562045 ZC3H4Q9UPT8 1303 aaKnown RBP27.62■■■□□ 2.01
SYNGR3-202ENST00000562045 UBE4AQ14139 1066 aa27.61■■■□□ 2.01
SYNGR3-202ENST00000562045 ZNF646O15015 1829 aaPredicted RBP27.61■■■□□ 2.01
SYNGR3-202ENST00000562045 DDNO94850 711 aaPredicted RBP27.61■■■□□ 2.01
SYNGR3-202ENST00000562045 CEP126Q9P2H0 1117 aa27.61■■■□□ 2.01
SYNGR3-202ENST00000562045 PDE4AP27815 886 aa27.6■■■□□ 2.01
SYNGR3-202ENST00000562045 G3BP1Q13283 466 aaKnown RBP eCLIP27.6■■■□□ 2.01
SYNGR3-202ENST00000562045 OS9Q13438 667 aaPredicted RBP27.6■■■□□ 2.01
SYNGR3-202ENST00000562045 ERC1Q8IUD2 1116 aa27.6■■■□□ 2.01
SYNGR3-202ENST00000562045 RAD17O75943 681 aa27.59■■■□□ 2.01
SYNGR3-202ENST00000562045 GYG1P46976 350 aa27.59■■■□□ 2.01
SYNGR3-202ENST00000562045 CXCL9Q07325 125 aa27.59■■■□□ 2.01
SYNGR3-202ENST00000562045 PUM3Q15397 648 aaKnown RBP27.59■■■□□ 2.01
SYNGR3-202ENST00000562045 C15orf52Q6ZUT6 534 aaKnown RBP27.59■■■□□ 2.01
SYNGR3-202ENST00000562045 KIF1BPQ96EK5 621 aa27.59■■■□□ 2.01
SYNGR3-202ENST00000562045 PSME4Q14997 1843 aa27.59■■■□□ 2.01
SYNGR3-202ENST00000562045 GLTPD2A6NH11 291 aa27.58■■■□□ 2.01
SYNGR3-202ENST00000562045 ARAP2Q8WZ64 1704 aa27.58■■■□□ 2.01
SYNGR3-202ENST00000562045 ZNF784Q8NCA9 323 aaPredicted RBP27.58■■■□□ 2.01
SYNGR3-202ENST00000562045 RHPN1Q8TCX5 695 aa27.57■■■□□ 2
SYNGR3-202ENST00000562045 FAM84BQ96KN1 310 aaPredicted RBP27.57■■■□□ 2
SYNGR3-202ENST00000562045 SMARCA5O60264 1052 aaPredicted RBP27.56■■■□□ 2
SYNGR3-202ENST00000562045 ATP2B3Q16720 1220 aa27.56■■■□□ 2
SYNGR3-202ENST00000562045 G3V3G9 751 aa27.55■■■□□ 2
SYNGR3-202ENST00000562045 EIF6P56537 245 aaKnown RBP27.55■■■□□ 2
SYNGR3-202ENST00000562045 TIMM10P62072 90 aa27.55■■■□□ 2
SYNGR3-202ENST00000562045 DCAF8Q5TAQ9 597 aa27.55■■■□□ 2
SYNGR3-202ENST00000562045 COA1Q9GZY4 146 aa27.55■■■□□ 2
SYNGR3-202ENST00000562045 GJA3Q9Y6H8 435 aa27.55■■■□□ 2
SYNGR3-202ENST00000562045 ADORA1P30542 326 aa27.55■■■□□ 2
SYNGR3-202ENST00000562045 LPIN2Q92539 896 aa27.55■■■□□ 2
SYNGR3-202ENST00000562045 CD209Q9NNX6 404 aa27.55■■■□□ 2
SYNGR3-202ENST00000562045 WDR90Q96KV7 1748 aa27.53■■■□□ 2
SYNGR3-202ENST00000562045 PSMD14O00487 310 aa27.53■■■□□ 2
SYNGR3-202ENST00000562045 BCAMP50895 628 aa27.53■■■□□ 2
SYNGR3-202ENST00000562045 DPY19L2Q6NUT2 758 aa27.53■■■□□ 2
SYNGR3-202ENST00000562045 NMRK2Q9NPI5 230 aa27.53■■■□□ 2
SYNGR3-202ENST00000562045 ZNF609O15014 1411 aa27.53■■■□□ 2
SYNGR3-202ENST00000562045 POTECB2RU33 542 aa27.53■■■□□ 2
SYNGR3-202ENST00000562045 CIAPIN1Q6FI81 312 aa27.53■■■□□ 2
SYNGR3-202ENST00000562045 PODNQ7Z5L7 613 aa27.53■■■□□ 2
SYNGR3-202ENST00000562045 A0A1B0GUL7 405 aa27.52■■■□□ 2
SYNGR3-202ENST00000562045 IFIT1P09914 478 aaKnown RBP27.52■■■□□ 2
SYNGR3-202ENST00000562045 SLC5A1P13866 664 aa27.52■■■□□ 2
SYNGR3-202ENST00000562045 FBXO33Q7Z6M2 555 aa27.52■■■□□ 2
SYNGR3-202ENST00000562045 GPC2Q8N158 579 aa27.52■■■□□ 2
SYNGR3-202ENST00000562045 IQSEC3Q9UPP2 1182 aaPredicted RBP27.52■■■□□ 2
SYNGR3-202ENST00000562045 ZNF804AQ7Z570 1209 aa27.51■■□□□ 1.99
SYNGR3-202ENST00000562045 MXD3Q9BW11 206 aa27.51■■□□□ 1.99
SYNGR3-202ENST00000562045 BCL11AQ9H165 835 aa27.51■■□□□ 1.99
SYNGR3-202ENST00000562045 ZBTB12Q9Y330 459 aaPredicted RBP27.51■■□□□ 1.99
SYNGR3-202ENST00000562045 IL1R1P14778 569 aa27.5■■□□□ 1.99
SYNGR3-202ENST00000562045 HIBADHP31937 336 aaKnown RBP27.5■■□□□ 1.99
SYNGR3-202ENST00000562045 IL1RAPL2Q9NP60 686 aa27.5■■□□□ 1.99
SYNGR3-202ENST00000562045 JAG2Q9Y219 1238 aa27.5■■□□□ 1.99
SYNGR3-202ENST00000562045 C16orf71Q8IYS4 520 aaPredicted RBP27.5■■□□□ 1.99
SYNGR3-202ENST00000562045 CLASRPQ8N2M8 674 aaKnown RBP27.5■■□□□ 1.99
SYNGR3-202ENST00000562045 RRAGCQ9HB90 399 aa27.5■■□□□ 1.99
SYNGR3-202ENST00000562045 TNNI3KQ59H18 835 aa27.49■■□□□ 1.99
SYNGR3-202ENST00000562045 GPBP1L1Q9HC44 474 aaPredicted RBP27.49■■□□□ 1.99
SYNGR3-202ENST00000562045 FPGT-TNNI3KV9GXZ4 949 aa27.49■■□□□ 1.99
SYNGR3-202ENST00000562045 SCNN1DP51172 638 aa27.48■■□□□ 1.99
SYNGR3-202ENST00000562045 PLEKHM2Q8IWE5 1019 aa27.48■■□□□ 1.99
SYNGR3-202ENST00000562045 TDRD7Q8NHU6 1098 aaKnown RBP27.48■■□□□ 1.99
SYNGR3-202ENST00000562045 XAGE2Q96GT9 111 aa27.48■■□□□ 1.99
SYNGR3-202ENST00000562045 MYH13Q9UKX3 1938 aa27.48■■□□□ 1.99
SYNGR3-202ENST00000562045 SHTN1A0MZ66 631 aa27.47■■□□□ 1.99
SYNGR3-202ENST00000562045 GTF2IP78347 998 aa27.47■■□□□ 1.99
SYNGR3-202ENST00000562045 FBXW7Q969H0 707 aa27.47■■□□□ 1.99
SYNGR3-202ENST00000562045 EAF2Q96CJ1 260 aaPredicted RBP27.47■■□□□ 1.99
SYNGR3-202ENST00000562045 L3MBTL3Q96JM7 780 aaPredicted RBP27.47■■□□□ 1.99
SYNGR3-202ENST00000562045 NEUROD6Q96NK8 337 aa27.47■■□□□ 1.99
SYNGR3-202ENST00000562045 AKAP2Q9Y2D5 859 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms