RNA–Protein interactions for RNA: ENST00000561702.5

SPG7-203, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-203ENST00000561702 A0A1B0GUL6 1792 aa17.15■□□□□ 0.34
SPG7-203ENST00000561702 GYS1P13807 737 aa17.14■□□□□ 0.34
SPG7-203ENST00000561702 ADORA1P30542 326 aa17.14■□□□□ 0.34
SPG7-203ENST00000561702 ZNF827Q17R98 1081 aa17.14■□□□□ 0.34
SPG7-203ENST00000561702 SYAP1Q96A49 352 aaPredicted RBP17.14■□□□□ 0.34
SPG7-203ENST00000561702 SH2B1Q9NRF2 756 aaPredicted RBP17.14■□□□□ 0.34
SPG7-203ENST00000561702 ARAP2Q8WZ64 1704 aa17.14■□□□□ 0.33
SPG7-203ENST00000561702 HMGB2P26583 209 aaKnown RBP17.14■□□□□ 0.33
SPG7-203ENST00000561702 TPTE2Q6XPS3 522 aa17.14■□□□□ 0.33
SPG7-203ENST00000561702 AKT1S1Q96B36 256 aa17.14■□□□□ 0.33
SPG7-203ENST00000561702 PPP1R9BQ96SB3 815 aa17.14■□□□□ 0.33
SPG7-203ENST00000561702 CARMIL3Q8ND23 1372 aa17.14■□□□□ 0.33
SPG7-203ENST00000561702 CCDC171Q6TFL3 1326 aa17.13■□□□□ 0.33
SPG7-203ENST00000561702 CCDC24Q8N4L8 307 aa17.13■□□□□ 0.33
SPG7-203ENST00000561702 GPT2Q8TD30 523 aa17.13■□□□□ 0.33
SPG7-203ENST00000561702 EDC3Q96F86 508 aaKnown RBP17.13■□□□□ 0.33
SPG7-203ENST00000561702 XAGE2Q96GT9 111 aa17.13■□□□□ 0.33
SPG7-203ENST00000561702 HAUS7Q99871 368 aa17.13■□□□□ 0.33
SPG7-203ENST00000561702 ZSWIM6Q9HCJ5 1215 aa17.13■□□□□ 0.33
SPG7-203ENST00000561702 ATP6V1DQ9Y5K8 247 aa17.13■□□□□ 0.33
SPG7-203ENST00000561702 CYP46A1Q9Y6A2 500 aa17.13■□□□□ 0.33
SPG7-203ENST00000561702 PSMA5P28066 241 aa17.13■□□□□ 0.33
SPG7-203ENST00000561702 CLCN1P35523 988 aa17.13■□□□□ 0.33
SPG7-203ENST00000561702 AK2P54819 239 aa17.13■□□□□ 0.33
SPG7-203ENST00000561702 ATP2B3Q16720 1220 aa17.13■□□□□ 0.33
SPG7-203ENST00000561702 RNF20Q5VTR2 975 aa17.13■□□□□ 0.33
SPG7-203ENST00000561702 NOL8Q76FK4 1167 aaKnown RBP17.13■□□□□ 0.33
SPG7-203ENST00000561702 RASEFQ8IZ41 740 aa17.13■□□□□ 0.33
SPG7-203ENST00000561702 NDUFB9Q9Y6M9 179 aa17.13■□□□□ 0.33
SPG7-203ENST00000561702 RFX7Q2KHR2 1363 aa17.12■□□□□ 0.33
SPG7-203ENST00000561702 MROH5Q6ZUA9 1318 aa17.12■□□□□ 0.33
SPG7-203ENST00000561702 PDE8BO95263 885 aa17.12■□□□□ 0.33
SPG7-203ENST00000561702 IGHMBP2P38935 993 aaKnown RBP17.12■□□□□ 0.33
SPG7-203ENST00000561702 NECTIN1Q15223 517 aa17.12■□□□□ 0.33
SPG7-203ENST00000561702 KLHL34Q8N239 644 aa17.12■□□□□ 0.33
SPG7-203ENST00000561702 MPHOSPH8Q99549 860 aa17.12■□□□□ 0.33
SPG7-203ENST00000561702 CASTP20810 708 aaKnown RBP17.11■□□□□ 0.33
SPG7-203ENST00000561702 TICAM2Q86XR7 235 aa17.11■□□□□ 0.33
SPG7-203ENST00000561702 MAP4K1Q92918 833 aa17.11■□□□□ 0.33
SPG7-203ENST00000561702 RRAGDQ9NQL2 400 aaPredicted RBP17.11■□□□□ 0.33
SPG7-203ENST00000561702 HELBQ8NG08 1087 aaPredicted RBP17.11■□□□□ 0.33
SPG7-203ENST00000561702 NLRP3Q96P20 1036 aa17.11■□□□□ 0.33
SPG7-203ENST00000561702 CDC5LQ99459 802 aaKnown RBP17.11■□□□□ 0.33
SPG7-203ENST00000561702 DNAJC2Q99543 621 aaKnown RBP17.11■□□□□ 0.33
SPG7-203ENST00000561702 AKAP11Q9UKA4 1901 aa17.11■□□□□ 0.33
SPG7-203ENST00000561702 TM4SF1P30408 202 aa17.1■□□□□ 0.33
SPG7-203ENST00000561702 LRSAM1Q6UWE0 723 aa17.1■□□□□ 0.33
SPG7-203ENST00000561702 RUFY3Q7L099 469 aa17.1■□□□□ 0.33
SPG7-203ENST00000561702 TMEM87AQ8NBN3 555 aa17.1■□□□□ 0.33
SPG7-203ENST00000561702 FSD1Q9BTV5 496 aa17.1■□□□□ 0.33
SPG7-203ENST00000561702 PDRG1Q9NUG6 133 aa17.1■□□□□ 0.33
SPG7-203ENST00000561702 TFCP2L1Q9NZI6 479 aa17.1■□□□□ 0.33
SPG7-203ENST00000561702 SMC3Q9UQE7 1217 aa17.1■□□□□ 0.33
SPG7-203ENST00000561702 FGFR2P21802 821 aa17.09■□□□□ 0.33
SPG7-203ENST00000561702 PTH1RQ03431 593 aa17.09■□□□□ 0.33
SPG7-203ENST00000561702 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.09■□□□□ 0.33
SPG7-203ENST00000561702 HMG20BQ9P0W2 317 aa17.09■□□□□ 0.33
SPG7-203ENST00000561702 IFIT1P09914 478 aaKnown RBP17.09■□□□□ 0.33
SPG7-203ENST00000561702 KCNJ4P48050 445 aa17.09■□□□□ 0.33
SPG7-203ENST00000561702 ANKRD1Q15327 319 aa17.09■□□□□ 0.33
SPG7-203ENST00000561702 CCDC158Q5M9N0 1113 aa17.09■□□□□ 0.33
SPG7-203ENST00000561702 GORABQ5T7V8 394 aa17.09■□□□□ 0.33
SPG7-203ENST00000561702 PRPF40BQ6NWY9 871 aaKnown RBP17.09■□□□□ 0.33
SPG7-203ENST00000561702 JAKMIP1Q96N16 626 aaKnown RBP17.09■□□□□ 0.33
SPG7-203ENST00000561702 ALDH8A1Q9H2A2 487 aaPredicted RBP17.09■□□□□ 0.33
SPG7-203ENST00000561702 ESPNB1AK53 854 aa17.08■□□□□ 0.33
SPG7-203ENST00000561702 TAF5LO75529 589 aa17.08■□□□□ 0.33
SPG7-203ENST00000561702 ZSCAN22P10073 491 aaPredicted RBP17.08■□□□□ 0.33
SPG7-203ENST00000561702 NMIQ13287 307 aaPredicted RBP17.08■□□□□ 0.33
SPG7-203ENST00000561702 PUM3Q15397 648 aaKnown RBP17.08■□□□□ 0.33
SPG7-203ENST00000561702 CSPP1Q1MSJ5 1256 aa17.08■□□□□ 0.33
SPG7-203ENST00000561702 TTC39AQ5SRH9 613 aa17.08■□□□□ 0.33
SPG7-203ENST00000561702 COL23A1Q86Y22 540 aaPredicted RBP17.08■□□□□ 0.33
SPG7-203ENST00000561702 ANKRD18AQ8IVF6 992 aa17.08■□□□□ 0.33
SPG7-203ENST00000561702 CNBD1Q8NA66 436 aa17.08■□□□□ 0.33
SPG7-203ENST00000561702 RBM8AQ9Y5S9 174 aaKnown RBP17.08■□□□□ 0.33
SPG7-203ENST00000561702 RPAP1Q9BWH6 1393 aaPredicted RBP17.08■□□□□ 0.32
SPG7-203ENST00000561702 STX6O43752 255 aa17.08■□□□□ 0.32
SPG7-203ENST00000561702 HS1BP3Q53T59 392 aa17.08■□□□□ 0.32
SPG7-203ENST00000561702 CREB3L3Q68CJ9 461 aa17.08■□□□□ 0.32
SPG7-203ENST00000561702 PRR5LQ6MZQ0 368 aa17.08■□□□□ 0.32
SPG7-203ENST00000561702 DDX46Q7L014 1031 aaKnown RBP17.08■□□□□ 0.32
SPG7-203ENST00000561702 CELF1Q92879 486 aaKnown RBP17.08■□□□□ 0.32
SPG7-203ENST00000561702 FAM227BQ96M60 508 aa17.08■□□□□ 0.32
SPG7-203ENST00000561702 TMEM63CQ9P1W3 806 aa17.08■□□□□ 0.32
SPG7-203ENST00000561702 MED23Q9ULK4 1368 aa17.07■□□□□ 0.32
SPG7-203ENST00000561702 NPHP1O15259 732 aa17.07■□□□□ 0.32
SPG7-203ENST00000561702 SERPINB2P05120 415 aa17.07■□□□□ 0.32
SPG7-203ENST00000561702 CHRNDQ07001 517 aa17.07■□□□□ 0.32
SPG7-203ENST00000561702 DDR1Q08345 913 aa17.07■□□□□ 0.32
SPG7-203ENST00000561702 TSGA10IPQ3SY00 556 aa17.07■□□□□ 0.32
SPG7-203ENST00000561702 FOXD4L5Q5VV16 416 aaPredicted RBP17.07■□□□□ 0.32
SPG7-203ENST00000561702 FOXD4L4Q8WXT5 416 aaPredicted RBP17.07■□□□□ 0.32
SPG7-203ENST00000561702 LPIN2Q92539 896 aa17.07■□□□□ 0.32
SPG7-203ENST00000561702 PAG1Q9NWQ8 432 aa17.07■□□□□ 0.32
SPG7-203ENST00000561702 SNAP23O00161 211 aa17.06■□□□□ 0.32
SPG7-203ENST00000561702 GOLIM4O00461 696 aa17.06■□□□□ 0.32
SPG7-203ENST00000561702 SCARF1Q14162 830 aa17.06■□□□□ 0.32
SPG7-203ENST00000561702 BSDC1Q9NW68 430 aaPredicted RBP17.06■□□□□ 0.32
SPG7-203ENST00000561702 A0A0D9SFI3 127 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms