RNA–Protein interactions for RNA: ENST00000560589.5

TLE3-222, Transcript of transducin like enhancer of split 3, human

TSL 5 BASIC

Gene TLE3, Length 3,509 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TLE3-222	ENST00000560589	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.32	□□□□□ -0.28
TLE3-222	ENST00000560589	RIC3	Q7Z5B4	369 aa		13.32	□□□□□ -0.28
TLE3-222	ENST00000560589	GOLGA5	Q8TBA6	731 aa		13.32	□□□□□ -0.28
TLE3-222	ENST00000560589	SPTLC3	Q9NUV7	552 aa		13.32	□□□□□ -0.28
TLE3-222	ENST00000560589	CCDC192	P0DO97	292 aa		13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	IL2RB	P14784	551 aa		13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	LIG1	P18858	919 aa		13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	CCDC183	Q5T5S1	534 aa		13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	ARMCX6	Q7L4S7	300 aa		13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	USP48	Q86UV5	1035 aa		13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	CEP120	Q8N960	986 aa		13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	DCAF5	Q96JK2	942 aa		13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	BABAM1	Q9NWV8	329 aa		13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	PPP1R12A	O14974	1030 aa	Predicted RBP	13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	HMMR	O75330	724 aa		13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	UVSSA	Q2YD98	709 aa		13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	MMS22L	Q6ZRQ5	1243 aa		13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	N4BP2L2	Q92802	583 aa	Predicted RBP	13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	CWC22	Q9HCG8	908 aa	Known RBP	13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	GNAI3	P08754	354 aa		13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	NBPF20	Q3BBV1	942 aa		13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	TBC1D9	Q6ZT07	1266 aa		13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	CREBRF	Q8IUR6	639 aa		13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	ALS2	Q96Q42	1657 aa		13.31	□□□□□ -0.28
TLE3-222	ENST00000560589	XIRP1	Q702N8	1843 aa	Known RBP	13.3	□□□□□ -0.28
TLE3-222	ENST00000560589	SKIL	P12757	684 aa		13.3	□□□□□ -0.28
TLE3-222	ENST00000560589	COPS6	Q7L5N1	327 aa		13.3	□□□□□ -0.28
TLE3-222	ENST00000560589	FBXO18	Q8NFZ0	1043 aa		13.3	□□□□□ -0.28
TLE3-222	ENST00000560589	KCNF1	Q9H3M0	494 aa		13.3	□□□□□ -0.28
TLE3-222	ENST00000560589	ACBD3	Q9H3P7	528 aa		13.3	□□□□□ -0.28
TLE3-222	ENST00000560589	KDM6A	O15550	1401 aa	Predicted RBP	13.3	□□□□□ -0.28
TLE3-222	ENST00000560589	ERLIN2	O94905	339 aa		13.3	□□□□□ -0.28
TLE3-222	ENST00000560589	XAGE3	Q8WTP9	111 aa		13.3	□□□□□ -0.28
TLE3-222	ENST00000560589	NUCKS1	Q9H1E3	243 aa	Known RBP	13.3	□□□□□ -0.28
TLE3-222	ENST00000560589	CAMTA1	Q9Y6Y1	1673 aa		13.3	□□□□□ -0.28
TLE3-222	ENST00000560589	VPS37C	A5D8V6	355 aa	Predicted RBP	13.3	□□□□□ -0.28
TLE3-222	ENST00000560589	KIF2A	O00139	706 aa	Predicted RBP	13.3	□□□□□ -0.28
TLE3-222	ENST00000560589	ANAPC15	P60006	121 aa		13.3	□□□□□ -0.28
TLE3-222	ENST00000560589	KIRREL3	Q8IZU9	778 aa		13.3	□□□□□ -0.28
TLE3-222	ENST00000560589	LARP6	Q9BRS8	491 aa	Known RBP	13.3	□□□□□ -0.28
TLE3-222	ENST00000560589	EPC1	Q9H2F5	836 aa		13.3	□□□□□ -0.28
TLE3-222	ENST00000560589	SRGAP3	O43295	1099 aa		13.29	□□□□□ -0.28
TLE3-222	ENST00000560589	SURF6	O75683	361 aa	Known RBP	13.29	□□□□□ -0.28
TLE3-222	ENST00000560589	SSB	P05455	408 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
TLE3-222	ENST00000560589	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
TLE3-222	ENST00000560589	ATP5J2-PTCD1	G3V325	749 aa		13.29	□□□□□ -0.28
TLE3-222	ENST00000560589	CLNS1A	P54105	237 aa	Known RBP	13.29	□□□□□ -0.28
TLE3-222	ENST00000560589	PPP1R42	Q7Z4L9	355 aa		13.29	□□□□□ -0.28
TLE3-222	ENST00000560589	ACTN2	P35609	894 aa		13.29	□□□□□ -0.28
TLE3-222	ENST00000560589	FMNL2	Q96PY5	1086 aa		13.29	□□□□□ -0.28
TLE3-222	ENST00000560589	PLEKHM2	Q8IWE5	1019 aa		13.28	□□□□□ -0.28
TLE3-222	ENST00000560589	MRFAP1	Q9Y605	127 aa		13.28	□□□□□ -0.28
TLE3-222	ENST00000560589	USP54	Q70EL1	1684 aa		13.28	□□□□□ -0.28
TLE3-222	ENST00000560589	ATP10D	Q9P241	1426 aa		13.28	□□□□□ -0.28
TLE3-222	ENST00000560589	SNW1	Q13573	536 aa	Known RBP	13.28	□□□□□ -0.28
TLE3-222	ENST00000560589	BEND3	Q5T5X7	828 aa		13.28	□□□□□ -0.28
TLE3-222	ENST00000560589	MRFAP1L1	Q96HT8	127 aa		13.28	□□□□□ -0.28
TLE3-222	ENST00000560589	DNAI1	Q9UI46	699 aa		13.28	□□□□□ -0.28
TLE3-222	ENST00000560589	SKAP2	O75563	359 aa	Predicted RBP	13.27	□□□□□ -0.28
TLE3-222	ENST00000560589	A1BG	P04217	495 aa		13.27	□□□□□ -0.28
TLE3-222	ENST00000560589	PAX7	P23759	505 aa		13.27	□□□□□ -0.28
TLE3-222	ENST00000560589	MYD88	Q99836	296 aa		13.27	□□□□□ -0.28
TLE3-222	ENST00000560589	ARFGAP3	Q9NP61	516 aa		13.27	□□□□□ -0.28
TLE3-222	ENST00000560589	MED4	Q9NPJ6	270 aa		13.27	□□□□□ -0.28
TLE3-222	ENST00000560589	MCM2	P49736	904 aa		13.27	□□□□□ -0.28
TLE3-222	ENST00000560589	RNF20	Q5VTR2	975 aa		13.27	□□□□□ -0.28
TLE3-222	ENST00000560589	ADAM21	Q9UKJ8	722 aa		13.27	□□□□□ -0.28
TLE3-222	ENST00000560589	CPD	O75976	1380 aa		13.27	□□□□□ -0.29
TLE3-222	ENST00000560589	SNRPA1	P09661	255 aa	Known RBP	13.27	□□□□□ -0.29
TLE3-222	ENST00000560589	MFSD4B	Q5TF39	518 aa		13.27	□□□□□ -0.29
TLE3-222	ENST00000560589	VEZT	Q9HBM0	779 aa		13.27	□□□□□ -0.29
TLE3-222	ENST00000560589	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
TLE3-222	ENST00000560589	CNPY2	Q9Y2B0	182 aa		13.27	□□□□□ -0.29
TLE3-222	ENST00000560589	CCDC196	A0A1B0GTZ2	297 aa		13.26	□□□□□ -0.29
TLE3-222	ENST00000560589	CDC45	O75419	566 aa		13.26	□□□□□ -0.29
TLE3-222	ENST00000560589	MAP4K4	O95819	1239 aa	Predicted RBP	13.26	□□□□□ -0.29
TLE3-222	ENST00000560589	FBXW10	Q5XX13	1052 aa		13.26	□□□□□ -0.29
TLE3-222	ENST00000560589	KSR2	Q6VAB6	950 aa		13.26	□□□□□ -0.29
TLE3-222	ENST00000560589	NUTM1	Q86Y26	1132 aa		13.26	□□□□□ -0.29
TLE3-222	ENST00000560589	UPF3B	Q9BZI7	483 aa	Known RBP	13.26	□□□□□ -0.29
TLE3-222	ENST00000560589	PA2G4	Q9UQ80	394 aa	Known RBP	13.26	□□□□□ -0.29
TLE3-222	ENST00000560589	KIF4A	O95239	1232 aa		13.26	□□□□□ -0.29
TLE3-222	ENST00000560589	GSPT1	P15170	499 aa	Known RBP	13.26	□□□□□ -0.29
TLE3-222	ENST00000560589	GBP2	P32456	591 aa	Predicted RBP	13.26	□□□□□ -0.29
TLE3-222	ENST00000560589	ATP8B2	P98198	1209 aa		13.26	□□□□□ -0.29
TLE3-222	ENST00000560589	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
TLE3-222	ENST00000560589	ADCY9	O60503	1353 aa		13.26	□□□□□ -0.29
TLE3-222	ENST00000560589	AK9	Q5TCS8	1911 aa		13.26	□□□□□ -0.29
TLE3-222	ENST00000560589	FOXR1	Q6PIV2	292 aa		13.26	□□□□□ -0.29
TLE3-222	ENST00000560589	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.26	□□□□□ -0.29
TLE3-222	ENST00000560589	CCDC97	Q96F63	343 aa	Predicted RBP	13.26	□□□□□ -0.29
TLE3-222	ENST00000560589	HYPK	Q9NX55	129 aa		13.26	□□□□□ -0.29
TLE3-222	ENST00000560589	PCDH11X	Q9BZA7	1347 aa		13.25	□□□□□ -0.29
TLE3-222	ENST00000560589	PCDH11Y	Q9BZA8	1340 aa		13.25	□□□□□ -0.29
TLE3-222	ENST00000560589	HOXB7	P09629	217 aa		13.25	□□□□□ -0.29
TLE3-222	ENST00000560589	PDIA6	Q15084	440 aa		13.25	□□□□□ -0.29
TLE3-222	ENST00000560589	SIL1	Q9H173	461 aa		13.25	□□□□□ -0.29
TLE3-222	ENST00000560589	DDX58	O95786	925 aa	Known RBP	13.25	□□□□□ -0.29
TLE3-222	ENST00000560589	RPSA	P08865	295 aa	Known RBP	13.25	□□□□□ -0.29
TLE3-222	ENST00000560589	UBAP1L	F5GYI3	381 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms