RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 REPIN1Q9BWE0 567 aaKnown RBP7.81□□□□□ -1.16
USP3-215ENST00000559771 TBC1D2BQ9UPU7 963 aa7.81□□□□□ -1.16
USP3-215ENST00000559771 ARIH1Q9Y4X5 557 aaPredicted RBP7.81□□□□□ -1.16
USP3-215ENST00000559771 DICER1Q9UPY3 1922 aaKnown RBP7.81□□□□□ -1.16
USP3-215ENST00000559771 CACNA1SQ13698 1873 aa7.81□□□□□ -1.16
USP3-215ENST00000559771 SIAH2O43255 324 aa7.8□□□□□ -1.16
USP3-215ENST00000559771 STARD3NLO95772 234 aa7.8□□□□□ -1.16
USP3-215ENST00000559771 PRKAR2BP31323 418 aa7.8□□□□□ -1.16
USP3-215ENST00000559771 IL6STP40189 918 aaPredicted RBP7.8□□□□□ -1.16
USP3-215ENST00000559771 BRICD5Q6PL45 260 aa7.8□□□□□ -1.16
USP3-215ENST00000559771 TTC5Q8N0Z6 440 aa7.8□□□□□ -1.16
USP3-215ENST00000559771 TTLL6Q8N841 843 aa7.8□□□□□ -1.16
USP3-215ENST00000559771 GAS2L2Q8NHY3 880 aa7.8□□□□□ -1.16
USP3-215ENST00000559771 SLC27A5Q9Y2P5 690 aa7.8□□□□□ -1.16
USP3-215ENST00000559771 USP16Q9Y5T5 823 aa7.8□□□□□ -1.16
USP3-215ENST00000559771 KDM2BQ8NHM5 1336 aa7.79□□□□□ -1.16
USP3-215ENST00000559771 ZC3H4Q9UPT8 1303 aaKnown RBP7.79□□□□□ -1.16
USP3-215ENST00000559771 GLTPD2A6NH11 291 aa7.79□□□□□ -1.16
USP3-215ENST00000559771 H0YIN7 160 aa7.79□□□□□ -1.16
USP3-215ENST00000559771 LMNB1P20700 586 aa7.79□□□□□ -1.16
USP3-215ENST00000559771 PPP2R1AP30153 589 aa7.79□□□□□ -1.16
USP3-215ENST00000559771 PIP4K2AP48426 406 aaPredicted RBP7.79□□□□□ -1.16
USP3-215ENST00000559771 TEFQ10587 303 aa7.79□□□□□ -1.16
USP3-215ENST00000559771 FSTL1Q12841 308 aa7.79□□□□□ -1.16
USP3-215ENST00000559771 ZNF385CQ66K41 422 aaPredicted RBP7.79□□□□□ -1.16
USP3-215ENST00000559771 NBPF10Q6P3W6 841 aaKnown RBP7.79□□□□□ -1.16
USP3-215ENST00000559771 NBPF15Q8N660 670 aa7.79□□□□□ -1.16
USP3-215ENST00000559771 GPR161Q8N6U8 529 aaKnown RBP7.79□□□□□ -1.16
USP3-215ENST00000559771 JMYQ8N9B5 988 aa7.79□□□□□ -1.16
USP3-215ENST00000559771 FMNL2Q96PY5 1086 aa7.79□□□□□ -1.16
USP3-215ENST00000559771 BRIP1Q9BX63 1249 aa7.79□□□□□ -1.16
USP3-215ENST00000559771 DLG5Q8TDM6 1919 aa7.79□□□□□ -1.16
USP3-215ENST00000559771 A0A087WZG4 1122 aa7.78□□□□□ -1.16
USP3-215ENST00000559771 BTBD11A6QL63 1104 aa7.78□□□□□ -1.16
USP3-215ENST00000559771 FMNL1O95466 1100 aaPredicted RBP7.78□□□□□ -1.16
USP3-215ENST00000559771 DCTN1Q14203 1278 aa7.78□□□□□ -1.16
USP3-215ENST00000559771 MCM10Q7L590 875 aa7.78□□□□□ -1.16
USP3-215ENST00000559771 KLRG1Q96E93 195 aa7.78□□□□□ -1.16
USP3-215ENST00000559771 TEX13AQ9BXU3 409 aaPredicted RBP7.78□□□□□ -1.16
USP3-215ENST00000559771 KDM3BQ7LBC6 1761 aa7.78□□□□□ -1.16
USP3-215ENST00000559771 LAMB4A4D0S4 1761 aa7.77□□□□□ -1.17
USP3-215ENST00000559771 C21orf2O43822 256 aa7.77□□□□□ -1.17
USP3-215ENST00000559771 SRGNP10124 158 aa7.77□□□□□ -1.17
USP3-215ENST00000559771 MSS51Q4VC12 460 aa7.77□□□□□ -1.17
USP3-215ENST00000559771 C7orf43Q8WVR3 580 aa7.77□□□□□ -1.17
USP3-215ENST00000559771 ZNF330Q9Y3S2 320 aaPredicted RBP7.77□□□□□ -1.17
USP3-215ENST00000559771 SALL2Q9Y467 1007 aaPredicted RBP7.77□□□□□ -1.17
USP3-215ENST00000559771 KLRG2A4D1S0 409 aaPredicted RBP7.76□□□□□ -1.17
USP3-215ENST00000559771 ARHGEF15O94989 841 aa7.76□□□□□ -1.17
USP3-215ENST00000559771 VEGFAP15692 232 aaPredicted RBP7.76□□□□□ -1.17
USP3-215ENST00000559771 PDE6BP35913 854 aa7.76□□□□□ -1.17
USP3-215ENST00000559771 DZIP3Q86Y13 1208 aaKnown RBP7.76□□□□□ -1.17
USP3-215ENST00000559771 C16orf71Q8IYS4 520 aaPredicted RBP7.76□□□□□ -1.17
USP3-215ENST00000559771 SMC1BQ8NDV3 1235 aa7.76□□□□□ -1.17
USP3-215ENST00000559771 ZNF622Q969S3 477 aaKnown RBP eCLIP7.76□□□□□ -1.17
USP3-215ENST00000559771 SETDB2Q96T68 719 aa7.76□□□□□ -1.17
USP3-215ENST00000559771 SNED1Q8TER0 1413 aa7.76□□□□□ -1.17
USP3-215ENST00000559771 LTBP3Q9NS15 1303 aa7.76□□□□□ -1.17
USP3-215ENST00000559771 PPFIA3O75145 1194 aa7.75□□□□□ -1.17
USP3-215ENST00000559771 SNRPA1P09661 255 aaKnown RBP7.75□□□□□ -1.17
USP3-215ENST00000559771 U2AF1L5P0DN76 240 aaPredicted RBP7.75□□□□□ -1.17
USP3-215ENST00000559771 FECHP22830 423 aa7.75□□□□□ -1.17
USP3-215ENST00000559771 U2AF1Q01081 240 aaKnown RBP eCLIP7.75□□□□□ -1.178e-9■□□□□ 10.7
USP3-215ENST00000559771 HLFQ16534 295 aa7.75□□□□□ -1.17
USP3-215ENST00000559771 STYK1Q6J9G0 422 aa7.75□□□□□ -1.17
USP3-215ENST00000559771 PRPF40BQ6NWY9 871 aaKnown RBP7.75□□□□□ -1.17
USP3-215ENST00000559771 OLFM4Q6UX06 510 aa7.75□□□□□ -1.17
USP3-215ENST00000559771 CNBD1Q8NA66 436 aa7.75□□□□□ -1.17
USP3-215ENST00000559771 CFAP53Q96M91 514 aa7.75□□□□□ -1.17
USP3-215ENST00000559771 PLEKHF1Q96S99 279 aa7.75□□□□□ -1.17
USP3-215ENST00000559771 MIS18AQ9NYP9 233 aa7.75□□□□□ -1.17
USP3-215ENST00000559771 NUP98P52948 1817 aa7.75□□□□□ -1.17
USP3-215ENST00000559771 ADAMTSL1Q8N6G6 1762 aa7.74□□□□□ -1.17
USP3-215ENST00000559771 HTATSF1O43719 755 aaKnown RBP7.74□□□□□ -1.17
USP3-215ENST00000559771 FUT2Q10981 343 aa7.74□□□□□ -1.17
USP3-215ENST00000559771 ERFEQ4G0M1 354 aa7.74□□□□□ -1.17
USP3-215ENST00000559771 COL13A1Q5TAT6 717 aaPredicted RBP7.74□□□□□ -1.17
USP3-215ENST00000559771 CLEC4GQ6UXB4 293 aa7.74□□□□□ -1.17
USP3-215ENST00000559771 RNF19BQ6ZMZ0 732 aa7.74□□□□□ -1.17
USP3-215ENST00000559771 WHAMMQ8TF30 809 aa7.74□□□□□ -1.17
USP3-215ENST00000559771 MASTLQ96GX5 879 aa7.74□□□□□ -1.17
USP3-215ENST00000559771 COL4A5P29400 1685 aa7.73□□□□□ -1.17
USP3-215ENST00000559771 DDNO94850 711 aaPredicted RBP7.73□□□□□ -1.17
USP3-215ENST00000559771 MMP16P51512 607 aa7.73□□□□□ -1.17
USP3-215ENST00000559771 KANK3Q6NY19 840 aa7.73□□□□□ -1.17
USP3-215ENST00000559771 SLC51AQ86UW1 340 aa7.73□□□□□ -1.17
USP3-215ENST00000559771 CNKSR1Q969H4 720 aa7.73□□□□□ -1.17
USP3-215ENST00000559771 CNTNAP3BQ96NU0 1288 aa7.73□□□□□ -1.17
USP3-215ENST00000559771 SPOCK3Q9BQ16 436 aa7.73□□□□□ -1.17
USP3-215ENST00000559771 CNTNAP3Q9BZ76 1288 aa7.73□□□□□ -1.17
USP3-215ENST00000559771 TAOK3Q9H2K8 898 aa7.73□□□□□ -1.17
USP3-215ENST00000559771 NUDCQ9Y266 331 aa7.73□□□□□ -1.17
USP3-215ENST00000559771 SCN4AP35499 1836 aa7.73□□□□□ -1.17
USP3-215ENST00000559771 ABCC12Q96J65 1359 aa7.72□□□□□ -1.17
USP3-215ENST00000559771 WNT7BP56706 349 aa7.72□□□□□ -1.17
USP3-215ENST00000559771 ST5P78524 1137 aa7.72□□□□□ -1.17
USP3-215ENST00000559771 TAF7Q15545 349 aaPredicted RBP7.72□□□□□ -1.17
USP3-215ENST00000559771 NBPF5PQ86XG9 351 aaPredicted RBP7.72□□□□□ -1.17
USP3-215ENST00000559771 RTF1Q92541 710 aaKnown RBP7.72□□□□□ -1.17
USP3-215ENST00000559771 THUMPD2Q9BTF0 503 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms