RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CHRNA4P43681 627 aa6.22□□□□□ -1.41
SPG11-206ENST00000558093 CABP4P57796 275 aa6.22□□□□□ -1.41
SPG11-206ENST00000558093 ORC1Q13415 861 aa6.22□□□□□ -1.41
SPG11-206ENST00000558093 FAM117BQ6P1L5 589 aa6.22□□□□□ -1.41
SPG11-206ENST00000558093 DCAF11Q8TEB1 546 aa6.22□□□□□ -1.41
SPG11-206ENST00000558093 OSMRQ99650 979 aa6.22□□□□□ -1.41
SPG11-206ENST00000558093 RBCK1Q9BYM8 510 aa6.22□□□□□ -1.41
SPG11-206ENST00000558093 NIF3L1Q9GZT8 377 aa6.22□□□□□ -1.41
SPG11-206ENST00000558093 ZFYVE28Q9HCC9 887 aa6.22□□□□□ -1.41
SPG11-206ENST00000558093 DZANK1Q9NVP4 752 aa6.22□□□□□ -1.41
SPG11-206ENST00000558093 USP21Q9UK80 565 aa6.22□□□□□ -1.41
SPG11-206ENST00000558093 PPME1Q9Y570 386 aa6.22□□□□□ -1.41
SPG11-206ENST00000558093 PDE2AO00408 941 aaPredicted RBP6.21□□□□□ -1.42
SPG11-206ENST00000558093 CPNE3O75131 537 aaKnown RBP6.21□□□□□ -1.42
SPG11-206ENST00000558093 TRPA1O75762 1119 aa6.21□□□□□ -1.42
SPG11-206ENST00000558093 TXNDC11Q6PKC3 985 aa6.21□□□□□ -1.42
SPG11-206ENST00000558093 CD163Q86VB7 1156 aa6.21□□□□□ -1.42
SPG11-206ENST00000558093 ASAP3Q8TDY4 903 aa6.21□□□□□ -1.42
SPG11-206ENST00000558093 ZKSCAN3Q9BRR0 538 aa6.21□□□□□ -1.42
SPG11-206ENST00000558093 SRA1Q9HD15 236 aaKnown RBP6.21□□□□□ -1.42
SPG11-206ENST00000558093 C9orf172C9J069 976 aa6.2□□□□□ -1.42
SPG11-206ENST00000558093 LINC01387J3KSC0 135 aa6.2□□□□□ -1.42
SPG11-206ENST00000558093 BAG6P46379 1132 aa6.2□□□□□ -1.42
SPG11-206ENST00000558093 TMC7Q7Z402 723 aa6.2□□□□□ -1.42
SPG11-206ENST00000558093 FBXO11Q86XK2 927 aa6.2□□□□□ -1.42
SPG11-206ENST00000558093 MAP4K3Q8IVH8 894 aa6.2□□□□□ -1.42
SPG11-206ENST00000558093 ZSCAN29Q8IWY8 852 aaPredicted RBP6.2□□□□□ -1.42
SPG11-206ENST00000558093 HHIPQ96QV1 700 aa6.2□□□□□ -1.42
SPG11-206ENST00000558093 POP1Q99575 1024 aaKnown RBP6.2□□□□□ -1.42
SPG11-206ENST00000558093 SH2B1Q9NRF2 756 aaPredicted RBP6.2□□□□□ -1.42
SPG11-206ENST00000558093 LATS2Q9NRM7 1088 aa6.2□□□□□ -1.42
SPG11-206ENST00000558093 EIF1AYO14602 144 aaKnown RBP6.19□□□□□ -1.42
SPG11-206ENST00000558093 EPHA1P21709 976 aa6.19□□□□□ -1.42
SPG11-206ENST00000558093 GATA4P43694 442 aa6.19□□□□□ -1.42
SPG11-206ENST00000558093 NRG1Q02297 640 aaPredicted RBP6.19□□□□□ -1.42
SPG11-206ENST00000558093 USPL1Q5W0Q7 1092 aa6.19□□□□□ -1.42
SPG11-206ENST00000558093 SHISA2Q6UWI4 295 aa6.19□□□□□ -1.42
SPG11-206ENST00000558093 TMEM102Q8N9M5 508 aaPredicted RBP6.19□□□□□ -1.42
SPG11-206ENST00000558093 SPOCK3Q9BQ16 436 aa6.19□□□□□ -1.42
SPG11-206ENST00000558093 NPHS2Q9NP85 383 aa6.19□□□□□ -1.42
SPG11-206ENST00000558093 H3BRJ5 948 aa6.18□□□□□ -1.42
SPG11-206ENST00000558093 DEAF1O75398 565 aaPredicted RBP6.18□□□□□ -1.42
SPG11-206ENST00000558093 SELPP16109 830 aa6.18□□□□□ -1.42
SPG11-206ENST00000558093 GALNT12Q8IXK2 581 aa6.18□□□□□ -1.42
SPG11-206ENST00000558093 CARD10Q9BWT7 1032 aa6.18□□□□□ -1.42
SPG11-206ENST00000558093 DNAJC25Q9H1X3 360 aa6.18□□□□□ -1.42
SPG11-206ENST00000558093 NFKBIEO00221 500 aa6.17□□□□□ -1.42
SPG11-206ENST00000558093 GADD45BO75293 160 aaPredicted RBP6.17□□□□□ -1.42
SPG11-206ENST00000558093 ITGB2P05107 769 aa6.17□□□□□ -1.42
SPG11-206ENST00000558093 SETDB1Q15047 1291 aa6.17□□□□□ -1.42
SPG11-206ENST00000558093 PEAR1Q5VY43 1037 aaPredicted RBP6.17□□□□□ -1.42
SPG11-206ENST00000558093 SLC7A3Q8WY07 619 aa6.17□□□□□ -1.42
SPG11-206ENST00000558093 BSNDQ8WZ55 320 aa6.17□□□□□ -1.42
SPG11-206ENST00000558093 ALKBH8Q96BT7 664 aaKnown RBP6.17□□□□□ -1.42
SPG11-206ENST00000558093 LENG1Q96BZ8 264 aaPredicted RBP6.17□□□□□ -1.42
SPG11-206ENST00000558093 CSRNP1Q96S65 589 aa6.17□□□□□ -1.42
SPG11-206ENST00000558093 ADAM19Q9H013 955 aa6.17□□□□□ -1.42
SPG11-206ENST00000558093 EHD4Q9H223 541 aa6.17□□□□□ -1.42
SPG11-206ENST00000558093 LIN7BQ9HAP6 207 aa6.17□□□□□ -1.42
SPG11-206ENST00000558093 A0A1W2PP55 124 aa6.16□□□□□ -1.42
SPG11-206ENST00000558093 FSCN2O14926 492 aa6.16□□□□□ -1.42
SPG11-206ENST00000558093 PROCP04070 461 aa6.16□□□□□ -1.42
SPG11-206ENST00000558093 MAPK8P45983 427 aa6.16□□□□□ -1.42
SPG11-206ENST00000558093 ARL4DP49703 201 aa6.16□□□□□ -1.42
SPG11-206ENST00000558093 MBTPS1Q14703 1052 aa6.16□□□□□ -1.42
SPG11-206ENST00000558093 IGF2-ASQ6U949 168 aa6.16□□□□□ -1.42
SPG11-206ENST00000558093 ADAMTSL4Q6UY14 1074 aa6.16□□□□□ -1.42
SPG11-206ENST00000558093 ILDR2Q71H61 639 aa6.16□□□□□ -1.42
SPG11-206ENST00000558093 SND1Q7KZF4 910 aaKnown RBP eCLIP6.16□□□□□ -1.42
SPG11-206ENST00000558093 NXPE3Q969Y0 559 aa6.16□□□□□ -1.42
SPG11-206ENST00000558093 CCDC74AQ96AQ1 378 aa6.16□□□□□ -1.42
SPG11-206ENST00000558093 BHLHE41Q9C0J9 482 aaPredicted RBP6.16□□□□□ -1.42
SPG11-206ENST00000558093 MRPL18Q9H0U6 180 aaKnown RBP6.16□□□□□ -1.42
SPG11-206ENST00000558093 SEC31BQ9NQW1 1179 aa6.16□□□□□ -1.42
SPG11-206ENST00000558093 PNMA6FA0A0J9YX94 578 aa6.15□□□□□ -1.42
SPG11-206ENST00000558093 METTL12A8MUP2 240 aa6.15□□□□□ -1.42
SPG11-206ENST00000558093 DLL1O00548 723 aa6.15□□□□□ -1.42
SPG11-206ENST00000558093 IGHA2P01877 340 aa6.15□□□□□ -1.42
SPG11-206ENST00000558093 CD68P34810 354 aaPredicted RBP6.15□□□□□ -1.42
SPG11-206ENST00000558093 PIP4K2BP78356 416 aa6.15□□□□□ -1.42
SPG11-206ENST00000558093 PLCB3Q01970 1234 aa6.15□□□□□ -1.42
SPG11-206ENST00000558093 IKBKEQ14164 716 aa6.15□□□□□ -1.42
SPG11-206ENST00000558093 ADGRE1Q14246 886 aa6.15□□□□□ -1.42
SPG11-206ENST00000558093 TXNRD3Q86VQ6 643 aa6.15□□□□□ -1.42
SPG11-206ENST00000558093 KLHL23Q8NBE8 558 aa6.15□□□□□ -1.42
SPG11-206ENST00000558093 ASB16Q96NS5 453 aa6.15□□□□□ -1.42
SPG11-206ENST00000558093 NLRP2Q9NX02 1062 aa6.15□□□□□ -1.42
SPG11-206ENST00000558093 SOX13Q9UN79 622 aa6.15□□□□□ -1.42
SPG11-206ENST00000558093 TREHO43280 583 aa6.14□□□□□ -1.43
SPG11-206ENST00000558093 ATP2B2Q01814 1243 aa6.14□□□□□ -1.43
SPG11-206ENST00000558093 GALNT11Q8NCW6 608 aa6.14□□□□□ -1.43
SPG11-206ENST00000558093 WNT8BQ93098 351 aa6.14□□□□□ -1.43
SPG11-206ENST00000558093 NLRP12P59046 1061 aa6.13□□□□□ -1.43
SPG11-206ENST00000558093 C19orf57Q0VDD7 668 aa6.13□□□□□ -1.43
SPG11-206ENST00000558093 DOC2BQ14184 412 aa6.13□□□□□ -1.43
SPG11-206ENST00000558093 DUOXA2Q1HG44 320 aa6.13□□□□□ -1.43
SPG11-206ENST00000558093 FOXD4L6Q3SYB3 417 aaPredicted RBP6.13□□□□□ -1.43
SPG11-206ENST00000558093 KIAA0319Q5VV43 1072 aa6.13□□□□□ -1.43
SPG11-206ENST00000558093 FOXD4L3Q6VB84 417 aaPredicted RBP6.13□□□□□ -1.43
SPG11-206ENST00000558093 ACAD11Q709F0 780 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms