RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 USP21Q9UK80 565 aa9.15□□□□□ -0.94
SPG11-204ENST00000557866 EXOC6BQ9Y2D4 811 aa9.15□□□□□ -0.94
SPG11-204ENST00000557866 FCF1Q9Y324 198 aaKnown RBP9.15□□□□□ -0.94
SPG11-204ENST00000557866 CACNA1FO60840 1977 aa9.15□□□□□ -0.95
SPG11-204ENST00000557866 UBR2Q8IWV8 1755 aa9.14□□□□□ -0.95
SPG11-204ENST00000557866 NWD2Q9ULI1 1742 aa9.14□□□□□ -0.95
SPG11-204ENST00000557866 ATP5J2-PTCD1G3V325 749 aa9.14□□□□□ -0.95
SPG11-204ENST00000557866 APBB1O00213 710 aa9.14□□□□□ -0.95
SPG11-204ENST00000557866 HOXA2O43364 376 aa9.14□□□□□ -0.95
SPG11-204ENST00000557866 KCNQ2O43526 872 aa9.14□□□□□ -0.95
SPG11-204ENST00000557866 CD2BP2O95400 341 aaKnown RBP9.14□□□□□ -0.95
SPG11-204ENST00000557866 MTX1Q13505 466 aa9.14□□□□□ -0.95
SPG11-204ENST00000557866 AMHR2Q16671 573 aa9.14□□□□□ -0.95
SPG11-204ENST00000557866 EPHA10Q5JZY3 1008 aa9.14□□□□□ -0.95
SPG11-204ENST00000557866 JARID2Q92833 1246 aaPredicted RBP9.14□□□□□ -0.95
SPG11-204ENST00000557866 USB1Q9BQ65 265 aaKnown RBP9.14□□□□□ -0.95
SPG11-204ENST00000557866 REPIN1Q9BWE0 567 aaKnown RBP9.14□□□□□ -0.95
SPG11-204ENST00000557866 TEX13AQ9BXU3 409 aaPredicted RBP9.14□□□□□ -0.95
SPG11-204ENST00000557866 N4BP2Q86UW6 1770 aaPredicted RBP9.14□□□□□ -0.95
SPG11-204ENST00000557866 SALL3Q9BXA9 1300 aa9.13□□□□□ -0.95
SPG11-204ENST00000557866 SRGAP3O43295 1099 aa9.13□□□□□ -0.95
SPG11-204ENST00000557866 STARD3NLO95772 234 aa9.13□□□□□ -0.95
SPG11-204ENST00000557866 GSPT1P15170 499 aaKnown RBP9.13□□□□□ -0.95
SPG11-204ENST00000557866 CASP7P55210 303 aa9.13□□□□□ -0.95
SPG11-204ENST00000557866 NEXNQ0ZGT2 675 aa9.13□□□□□ -0.95
SPG11-204ENST00000557866 BMP2KLQ5H9B9 411 aa9.13□□□□□ -0.95
SPG11-204ENST00000557866 NPM2Q86SE8 214 aaKnown RBP9.13□□□□□ -0.95
SPG11-204ENST00000557866 BICC1Q9H694 974 aaKnown RBP9.13□□□□□ -0.95
SPG11-204ENST00000557866 WNK3Q9BYP7 1800 aa9.12□□□□□ -0.95
SPG11-204ENST00000557866 ZBTB24O43167 697 aaPredicted RBP9.12□□□□□ -0.95
SPG11-204ENST00000557866 GDF9O60383 454 aa9.12□□□□□ -0.95
SPG11-204ENST00000557866 MMP16P51512 607 aa9.12□□□□□ -0.95
SPG11-204ENST00000557866 TTLL12Q14166 644 aaPredicted RBP9.12□□□□□ -0.95
SPG11-204ENST00000557866 PTF1AQ7RTS3 328 aa9.12□□□□□ -0.95
SPG11-204ENST00000557866 ZBTB3Q9H5J0 574 aa9.12□□□□□ -0.95
SPG11-204ENST00000557866 PRDM9Q9NQV7 894 aa9.12□□□□□ -0.95
SPG11-204ENST00000557866 ZBTB1Q9Y2K1 713 aa9.12□□□□□ -0.95
SPG11-204ENST00000557866 NOP58Q9Y2X3 529 aaKnown RBP9.12□□□□□ -0.95
SPG11-204ENST00000557866 AFF2P51816 1311 aa9.11□□□□□ -0.95
SPG11-204ENST00000557866 LOC102724428A0A0B4J2F2 783 aa9.11□□□□□ -0.95
SPG11-204ENST00000557866 H7C1W4 665 aa9.11□□□□□ -0.95
SPG11-204ENST00000557866 RAB11FIP3O75154 756 aa9.11□□□□□ -0.95
SPG11-204ENST00000557866 SURF6O75683 361 aaKnown RBP9.11□□□□□ -0.95
SPG11-204ENST00000557866 SIK1P57059 783 aa9.11□□□□□ -0.95
SPG11-204ENST00000557866 ITPK1Q13572 414 aa9.11□□□□□ -0.95
SPG11-204ENST00000557866 TTC22Q5TAA0 569 aa9.11□□□□□ -0.95
SPG11-204ENST00000557866 MEX3CQ5U5Q3 659 aaKnown RBP9.11□□□□□ -0.95
SPG11-204ENST00000557866 INTS5Q6P9B9 1019 aaKnown RBP9.11□□□□□ -0.95
SPG11-204ENST00000557866 GJD4Q96KN9 370 aaPredicted RBP9.11□□□□□ -0.95
SPG11-204ENST00000557866 ISCA1Q9BUE6 129 aa9.11□□□□□ -0.95
SPG11-204ENST00000557866 LRRCC1Q9C099 1032 aa9.11□□□□□ -0.95
SPG11-204ENST00000557866 BCL11AQ9H165 835 aa9.11□□□□□ -0.95
SPG11-204ENST00000557866 PA2G4Q9UQ80 394 aaKnown RBP9.11□□□□□ -0.95
SPG11-204ENST00000557866 ATRNO75882 1429 aa9.11□□□□□ -0.95
SPG11-204ENST00000557866 LAMB4A4D0S4 1761 aa9.11□□□□□ -0.95
SPG11-204ENST00000557866 COL15A1P39059 1388 aa9.11□□□□□ -0.95
SPG11-204ENST00000557866 A0A087WZG4 1122 aa9.1□□□□□ -0.95
SPG11-204ENST00000557866 LCE2BO14633 110 aa9.1□□□□□ -0.95
SPG11-204ENST00000557866 DGAT1O75907 488 aa9.1□□□□□ -0.95
SPG11-204ENST00000557866 ANP32AP39687 249 aaKnown RBP9.1□□□□□ -0.95
SPG11-204ENST00000557866 PDE1AP54750 535 aa9.1□□□□□ -0.95
SPG11-204ENST00000557866 TCIRG1Q13488 830 aa9.1□□□□□ -0.95
SPG11-204ENST00000557866 HLFQ16534 295 aa9.1□□□□□ -0.95
SPG11-204ENST00000557866 RABL6Q3YEC7 729 aaPredicted RBP9.1□□□□□ -0.95
SPG11-204ENST00000557866 RHPN1Q8TCX5 695 aa9.1□□□□□ -0.95
SPG11-204ENST00000557866 HLA-CQ95604 372 aa9.1□□□□□ -0.95
SPG11-204ENST00000557866 AK7Q96M32 723 aa9.1□□□□□ -0.95
SPG11-204ENST00000557866 OSBPL3Q9H4L5 887 aa9.1□□□□□ -0.95
SPG11-204ENST00000557866 CWC25Q9NXE8 425 aaPredicted RBP9.1□□□□□ -0.95
SPG11-204ENST00000557866 HDAC5Q9UQL6 1122 aa9.1□□□□□ -0.95
SPG11-204ENST00000557866 MAP3K15Q6ZN16 1313 aa9.09□□□□□ -0.95
SPG11-204ENST00000557866 RFX5P48382 616 aaPredicted RBP9.09□□□□□ -0.95
SPG11-204ENST00000557866 EIF5P55010 431 aaKnown RBP9.09□□□□□ -0.95
SPG11-204ENST00000557866 FOXO4P98177 505 aa9.09□□□□□ -0.95
SPG11-204ENST00000557866 TRIM28Q13263 835 aaKnown RBP9.09□□□□□ -0.95
SPG11-204ENST00000557866 TSHZ3Q63HK5 1081 aa9.09□□□□□ -0.95
SPG11-204ENST00000557866 UBE3BQ7Z3V4 1068 aa9.09□□□□□ -0.95
SPG11-204ENST00000557866 CCDC191Q8NCU4 936 aa9.09□□□□□ -0.95
SPG11-204ENST00000557866 KIF1BPQ96EK5 621 aa9.09□□□□□ -0.95
SPG11-204ENST00000557866 IL1RAPL2Q9NP60 686 aa9.09□□□□□ -0.95
SPG11-204ENST00000557866 STAP2Q9UGK3 403 aa9.09□□□□□ -0.95
SPG11-204ENST00000557866 ZNF330Q9Y3S2 320 aaPredicted RBP9.09□□□□□ -0.95
SPG11-204ENST00000557866 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.09□□□□□ -0.95
SPG11-204ENST00000557866 ITGB4P16144 1822 aa9.09□□□□□ -0.95
SPG11-204ENST00000557866 PALLDQ8WX93 1383 aa9.09□□□□□ -0.95
SPG11-204ENST00000557866 TNFRSF10AO00220 468 aa9.08□□□□□ -0.96
SPG11-204ENST00000557866 DXOO77932 396 aaKnown RBP9.08□□□□□ -0.96
SPG11-204ENST00000557866 SDSP20132 328 aa9.08□□□□□ -0.96
SPG11-204ENST00000557866 IL6STP40189 918 aaPredicted RBP9.08□□□□□ -0.96
SPG11-204ENST00000557866 CRKLP46109 303 aaKnown RBP9.08□□□□□ -0.96
SPG11-204ENST00000557866 PKDCCQ504Y2 493 aa9.08□□□□□ -0.96
SPG11-204ENST00000557866 FAM182BQ5T319 152 aa9.08□□□□□ -0.96
SPG11-204ENST00000557866 GIGYF2Q6Y7W6 1299 aaKnown RBP9.08□□□□□ -0.96
SPG11-204ENST00000557866 KIF6Q6ZMV9 814 aa9.08□□□□□ -0.96
SPG11-204ENST00000557866 TBC1D9Q6ZT07 1266 aa9.08□□□□□ -0.96
SPG11-204ENST00000557866 KLHDC4Q8TBB5 520 aa9.08□□□□□ -0.96
SPG11-204ENST00000557866 SPIRE2Q8WWL2 714 aa9.08□□□□□ -0.96
SPG11-204ENST00000557866 SMARCC1Q92922 1105 aaPredicted RBP9.08□□□□□ -0.96
SPG11-204ENST00000557866 IPO9Q96P70 1041 aaKnown RBP9.08□□□□□ -0.96
SPG11-204ENST00000557866 TRPC5Q9UL62 973 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms